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6 protocols using c maf

1

Western Blot Analysis of Stem Cell Markers

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Western blot analysis was performed as in(4 (link)) using antibodies to Twist1/Twist2 (ab50887; Abcam, Cambridge, MA), c-Maf (sc7866; Santa Cruz Biotechnology, Santa Cruz, CA), Bmi1 (05-1322; EMD Millipore, Billerica, MA), or anti-GAPDH (EMD Millipore).
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2

ChIP Assay for HDAC11 and c-Maf in DCs

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ChIP assay was performed with DCs using a reagent kit (Sigma Aldrich) following the manufacturer's instructions. Briefly, DCs were fixed with 1% formaldehyde for 15 min, lysed and sonicated to shear the chromatin DNA to 100–500 bp. Cell lysates were precleared by incubation with protein G-agarose beads for 2 h at 4°C. The supernatant was collected and incubated overnight at 4°C with 2 μg of antibodies of HDAC11 or c-Maf (Santa Cruz Biotech) or isotype IgG (a negative control). The antibody-chromatin complex was precipitated by incubation with protein G-agarose beads for 1 h at 4°C. The beads were centrifuged, washed and eluted in elution buffer. DNA was recovered from the precipitated samples by reverse crosslinking at 65°C for 4 h and digested with proteinase K for 1 h at 45°C to remove proteins, then the immunoprecipitated DNA was recovered by phenol/chloroform extraction and ethanol precipitation. The DNA or input was analyzed by PCR with the miR-19a promoter primers (Beijing Yijie Biotech; Beijing, China). The results were presented as folds of input.
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3

Western Blot and Immunoprecipitation Assays

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Western blot and immunoprecipitations were carried out by standard method. Antibodies used for western blotting were against β-actin (Cell Signaling, Danvers, MA, USA; 4967), NQO1 (Abcam, Cambridge, MA, USA; ab28947), p53 (Santa Cruz Biotechnology, Santa Cruz, CA, USA; sc-6243), p21 (Santa Cruz Biotechnology; sc-28777), p16 (Santa Cruz Biotechnology; sc-28777), and NRF2 (Abcam; ab62352). Antibodies used for immunoprecipitations were against p53 (Abcam; ab28), c-MAF (Santa Cruz Biotechnology; sc-7866), KEAP1 (Santa Cruz Biotechnology; sc-33569).
The densitometry data were analyzed by ImageJ software (National Institutes of Health, Bethesda, MD, USA).
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4

Interaction of RORγ, Blimp-1, and c-Maf

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The HEK-293T cells (2 × 106 cells/well) were transected with RORγ-Flag (5 μg) and or Blimp-1-Myc (5 μg) plasmids. According to the standard procedure, immunoprecipitation and immunoblotting were performed to analyze the combination of c-Maf (1:500, sc-7866, Santa Cruz, Dallas, TX, USA), Blimp-1 (1:500, sc-47732, Santa Cruz) and RORγ (1:500 sc-81371, Santa Cruz).
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5

Western Blot Analysis of Protein Targets

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Abs for KLF13, c-Maf, and α-actinin were purchased from Santa Cruz Biotechnology (Santa Cruz, CA), and GAPDH was purchased from Millipore (Billerica, MA). Mouse anti-V5 Ab was purchased from Invitrogen (Carlsbad, CA). Rabbit anti-FLAG Ab was purchased from Cell Signaling (Danvers, MA). For Western blot analysis, cells were lysed in cell lysis buffer (150 mM NaCl; 1 mM EDTA; 1 mM ethylene glycol-bis(β-aminoethyl ester)-N,N,N′,N′-tetraacetic acid; 1% Triton; 2.5 mM sodium pyrophosphate; 1 mM β-glycerolphosphate; 1 mM Na2VO4, in 20 mM Tris, pH 7.4) with Halt Protease and Phosphatase Inhibitor Cocktail (Thermo Scientific, Rockford, IL) and incubated on ice for 30 min. After centrifugation, the supernatant proteins (containing 25–50 μg protein) were separated by SDS-PAGE and transferred onto polyvinylidene difluoride membranes. Appropriate primary Abs and secondary Abs were used for Western blots.
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6

Comprehensive Immunological Assays Protocol

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The fluorochrome-labeled antibodies for flow cytometry were purchased from eBioscience (San Diego, CA). The antibodies of IL-10, A20, HDAC11, Sp, IRF, AP, CREB, c/EBP, c-Maf, NF-κB, STAT3, HDAC11 shRNA kit and A20 shRNA kit were purchased from Santa Cruz Biotech (Santa Cruz, CA). LPS, ChIP kit and luciferase kit were purchased from Sigma Aldrich (St. Louis., MO). The recombinant IL-4, IL-5, IL-13 and the ELISA kit of IL-4 were purchased from R&D Systems (Minneapolis, MN). The OVA-specific IgE ELISA kit was purchased from the Biomart (Beijing, China). The reagent kits for magnetic cell sorting were purchased from Miltenyi Biotech (San Diego, CA). Reagents for RT-qPCR and Western blotting were purchased from Invitrogen (Carlsbad, CA).
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