The largest database of trusted experimental protocols

9 protocols using agilent 1100 series binary hplc pump

1

Fecal Metabolome Analysis by CE-TOFMS

Check if the same lab product or an alternative is used in the 5 most similar protocols
Capillary electrophoresis time-of-flight mass spectrometry (CE-TOFMS)-based metabolome analysis of fecal samples was conducted as described previously (Hirayama et al., 2012 (link)) with some modifications. In brief, fecal samples were lyophilized using a VD-800R lyophilizer (TAITEC) for 24 h. Freeze-dried feces were disrupted with 3.0-mm Zirconia Beads (Biomedical Science) by vigorous shaking (1,500 rpm for 10 min) using the Shake Master (Biomedical Science). Fecal metabolites were extracted using the methanol:chloroform:water extraction protocol (Wang et al., 2015 (link)). CE-TOFMS experiments were performed using the Agilent CE System, the Agilent G3250AA LC/MSD TOF System, the Agilent 1100 Series Binary HPLC Pump, the G1603A Agilent CE-MS adapter, and the G1607A Agilent CE-ESI-MS Sprayer kit. In-house software (MasterHands) (Sugimoto et al., 2010 (link)) was used for data processing, quantification, and peak annotation.
+ Open protocol
+ Expand
2

Fecal Metabolome Analysis via CE-TOFMS

Check if the same lab product or an alternative is used in the 5 most similar protocols
Capillary electrophoresis time-of-flight mass spectrometry (CE-TOFMS)–based metabolome analysis was conducted as described previously with some modifications.28 (link) In brief, fecal samples were lyophilized by using a VD-800R lyophilizer (TAITEC, Saitama, Japan) for 24 hours. Freeze-dried feces were disrupted with 3.0-mm Zirconia Beads (Biomedical Science, Tokyo, Japan) by vigorous shaking (1500 rpm for 10 min) using Shake Master (Biomedical Science). Fecal metabolites were extracted by the methanol:chloroform:water extraction protocol. CE-TOFMS experiments were performed using the Agilent CE System, the Agilent G3250AA LC/MSD TOF System, the Agilent 1100 Series Binary HPLC Pump, the G1603A Agilent CE-MS adapter, and the G1607A Agilent CE-ESI-MS SprayerKit (all Agilent Technologies, Santa Clara, CA).
+ Open protocol
+ Expand
3

Fecal Metabolome Analysis by CE-TOFMS

Check if the same lab product or an alternative is used in the 5 most similar protocols
Capillary electrophoresis time-of-flight mass spectrometry (CE-TOFMS)–based metabolome analysis was conducted as described previously with some modifications 44 (link). In brief, fecal samples were lyophilized using a VD-800R lyophilizer (TAITEC) for 24 hours. Freeze-dried feces were disrupted with 3.0-mm Zirconia Beads (Biomedical Science) by vigorous shaking (1,500 rpm for 10 min) using ShakeMaster (Biomedical Science). Fecal metabolites were extracted using the methanol:chloroform:water extraction protocol. CE-TOFMS experiments were performed using the Agilent CE System, the Agilent G3250AA LC/MSD TOF System, the Agilent 1100 Series Binary HPLC Pump, the G1603A Agilent CE-MS adapter and the G1607A Agilent CE-ESI-MS Sprayer Kit (Agilent Technologies). MasterHands software was used for data processing, quantification and peak annotation 45 (link).
+ Open protocol
+ Expand
4

Anionic Metabolite Analysis by CE-TOFMS

Check if the same lab product or an alternative is used in the 5 most similar protocols
All capillary electrophoresis time-of-flight mass spectrometry (CE-TOFMS) experiments were performed using Agilent 7100 CE capillary electrophoresis (Agilent Technologies, Waldbronn, Germany), the Agilent 6230 LC/MSD TOF system (Agilent Technologies, Palo Alto, CA, USA), an Agilent1100 series binary HPLC pump, and the G1603A Agilent CE-MS adapter- and G1607A Agilent CE-ESI–MS sprayer kit. For anionic metabolite analysis, the original Agilent stainless electrospray ionization (ESI) needle was replaced with an Agilent G7100-60,041 platinum ESI needle (Soga et al., 2009 (link)). System control and data acquisition were performed using the Agilent MassHunter Workstation, and data analysis was performed using Keio MasterHands software.
+ Open protocol
+ Expand
5

Fecal Metabolome Analysis by CE-TOFMS

Check if the same lab product or an alternative is used in the 5 most similar protocols
Capillary electrophoresis time-of-flight mass spectrometry (CE-TOFMS)–based metabolome analysis was conducted as described previously with some modifications 44 (link). In brief, fecal samples were lyophilized using a VD-800R lyophilizer (TAITEC) for 24 hours. Freeze-dried feces were disrupted with 3.0-mm Zirconia Beads (Biomedical Science) by vigorous shaking (1,500 rpm for 10 min) using ShakeMaster (Biomedical Science). Fecal metabolites were extracted using the methanol:chloroform:water extraction protocol. CE-TOFMS experiments were performed using the Agilent CE System, the Agilent G3250AA LC/MSD TOF System, the Agilent 1100 Series Binary HPLC Pump, the G1603A Agilent CE-MS adapter and the G1607A Agilent CE-ESI-MS Sprayer Kit (Agilent Technologies). MasterHands software was used for data processing, quantification and peak annotation 45 (link).
+ Open protocol
+ Expand
6

Label-free Quantification of Proteins by LC-MS/MS

Check if the same lab product or an alternative is used in the 5 most similar protocols
Mass spectrometer analysis was performed using the linear ion trap-Fourier transform ion cyclotron resonance mass spectrometer (LTQ-FTICR MS; Thermo Fisher) equipped with a nano-electrospray ion source (New Objective) and a nano-HPLC system. Nano-HPLC separation used a reverse nano-column (75 μm I.D. × 200 mm) packaged with Magic C18AQ resin (particle size 5 μm, pore size 200 A°; Michrom Bioresources) and an Agilent 1100 series binary HPLC pump (Agilent Technologies). The analytic program was set at a linear gradient from 10% to 50% ACN with a 60 min running cycle. The survey scan of MS analysis (m/z 320–2,000) was performed in LTQ-FTICR MS with a mass resolution of 100,000 at m/z 400. Top ten most abundant multiply charged ions were sequentially isolated for MS/MS by LTQ. The resulting data were applied to the MaxQuant software [23 (link)] for protein identification. Accurate label-free quantification was performed using the MaxLFQ program by normalization and maximal peptide ratio extraction methods [24 (link)]. The significance threshold for the identification was set to P < .01.
+ Open protocol
+ Expand
7

Capillary Electrophoresis-Mass Spectrometry for Metabolites

Check if the same lab product or an alternative is used in the 5 most similar protocols
Plasma, urinary, and fecal levels of fecal purine metabolites including allantoin were measured using capillary electrophoresis-time-of-flight mass spectrometry (CE-TOFMS) as described previously [15 (link)]. All CE-TOFMS experiments were performed using an Agilent CE capillary electrophoresis system (Agilent Technologies, Santa Clara, CA, USA), an Agilent G3250AA LC/MSD TOF system (Agilent Technologies), an Agilent 1100 series binary HPLC pump, a, G1603A Agilent CE-MS adapter, and a G1607A Agilent CE-ESI-MS sprayer kit.
+ Open protocol
+ Expand
8

Anionic Metabolite Analysis by CE-TOFMS

Check if the same lab product or an alternative is used in the 5 most similar protocols
All capillary electrophoresis time-of-flight mass spectrometry (CE-TOFMS) experiments were performed using Agilent 7100 CE capillary electrophoresis (Agilent Technologies), the Agilent 6230 LC/MSD TOF system (Agilent Technologies), an Agilent1100 series binary HPLC pump, and the G1603A Agilent CE-MS adapter- and G1607A Agilent CE-ESI-MS sprayer kit. For anionic metabolite analysis, the original Agilent stainless ESI needle was replaced with the Agilent G7100-60041 platinum ESI needle.68 (link) System control and data acquisition were performed by Agilent MassHunter Workstation, and data analysis was done by Keio MasterHands software.
+ Open protocol
+ Expand
9

CE-TOFMS Fecal Metabolome Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
CE-TOFMS-based metabolome analysis was conducted as described previously with some modifications44 (link). In brief, fecal samples were lyophilized by using VD-800R lyophilizer (TAITEC) for 24 h. Freeze-dried feces were disrupted with 3.0 mm Zirconia Beads (Biomedical Science) by vigorous shaking (1,500 r.p.m. for10 min) using Shake Master (Biomedical Science). Fecal metabolites were extracted by the methanol:chloroform:water extraction protocol. CE-TOFMS experiments were performed using the Agilent CE System (Agilent Technologies), the Agilent G3250AA LC/MSD TOF System (Agilent Technologies), the Agilent 1100 Series Binary HPLC Pump, the G1603A Agilent CE-MS adapter (Agilent Technologies), and the G1607A Agilent CE-ESI-MS SprayerKit.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!