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10 protocols using anti her2

1

Protein Expression Analysis via Western Blot

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Whole cell extracts were prepared with a cell lysis reagent (Sigma-Aldrich, St Louis, MO, USA) according to the manual, and then the protein was quantified by a bicinchoninic acid (BCA) assay (Pierce, Rockford, IL, USA). The protein samples were later separated by sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) (10 %) and detected by Western blot using the following specific antibodies: anti-HER2, COX-2, P-ERK, ERK, AKT, p-AKT, MMP-2, caspase-3, and β-actin polyclonal antibodies (Santa Cruz Biotechnology Inc., Dallas, TX, USA), the antibodies were suspended in 5% BSA. Goat anti-rabbit IgG (Pierce) secondary antibody conjugated to horseradish peroxidase and ECL detection systems (SuperSignal West Femto, Pierce) were used for detection.
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2

In-Cell ELISA for Quantifying Nuclear Proteins

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In-cell ELISA was performed using the In-Cell ELISA Kit (Abcam, France) according to the manufacturer’s instructions and after a fixation step performed with 4% of paraformaldehyde solution (10 min at room temperature). Primary antibodies were incubated overnight at 4°C. Adequate HRP-conjugated secondary antibodies were incubated for 1 h at room temperature. Detection was performed at 450 nm.
After the washes, cells in each well were incubated with 1X Janus Green Stain for 5 min at room temperature, according to the manufacturer’s instructions. Data were expressed in normalized unit, according to the following calculation: (HRPsignal ‘minus’ HRPsignal in absence of primary antibody)/(Janus Green signal ‘minus’ Janus Green signal in absence of cells).
Antibodies used were anti-TET1 (sc163446, Santa Cruz, France), anti-TET2 (sc398535, Santa Cruz), anti-TET3 (sc139186, Santa Cruz), anti-ERα (sc8002, Santa Cruz), anti-PR (sc130071, Santa Cruz), and anti-HER2 (sc-393712, Santa Cruz).
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3

Western Blot Analysis of Cancer Stemness

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OVCAR3 and A2780 cell lines were processed for protein isolation and Western blotting using standard procedures, as described previously [19 (link)]. The following primary antibodies were used: anti-hPaf1/PD2, anti-Leo1, anti-Parafibromin, anti-Ctr9 (Bethyl Laboratories, Montgomery, TX, USA); anti-OCT3/4, anti-SOX-2, anti-CD24, anti-ESA, anti-SHH, anti-HER2 (Santa Cruz Biotechnology, Dallas, TX, USA); anti-CD44 (Cell signalling Technology, Danvers, MA, USA); anti-CD133 (Abnova, Walnut, CA, USA); anti–β-Catenin (Sigma); and anti-Lgr5, anti-SOX-9 (Abcam, Cambridge, MA, USA) overnight at 4°C. β-actin was used as a loading control. The band intensity was quantified using ImageJ and the normalization was performed as described previously [18 (link)].
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4

Western Blot Analysis of EGFR, HER2, and AKT Signaling

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Cell were lysed in RIPA buffer supplemented with protease and phosphatase inhibitors (Roche). Equal amounts of proteins from cells were separated by 4%–12% SDS-PAGE and were transferred to a PVDF membrane. The blots were blocked for 1 h with 5% Bovine Serum Albumin and then incubated over night with the following primary antibodies: Anti-EGFR (2256, Cell Signaling), Anti-pEGFR (2234, Cell Signaling), anti-HER2 (SC52349, Santa Cruz), anti-pHER2 (2247, Cell Signaling), anti-HER3 (SC81455, Santa Cruz), anti-pHER3 (4791, Cell Signaling), anti-AKT (2920, Cell Signaling), anti-pAKT (4060S, Cell Signaling) anti-P70S6K (49D7, Cell Signaling), anti-pP70S6K (108D2, Cell Signaling), and anti-GAPDH (ab9485, Abcam). Membranes were incubated with their respective secondary antibodies for 1h and analyzed using the enhanced chemiluminescence (ECL) system. Antibody detection and quantification were conducted using the iBright ™ FL1000 (ThermoFisher) and the iBright analysis software.
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5

Protein Expression Analysis in HCT-116 Cells

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Using the mammalian protein extraction reagent (Pierce, Rockford, IL, USA), the total proteins were extracted from HCT-116 cell lysates that are transfected with 1 μg/mL pcDNA-linc01184, 20 nM siRNA, 60 nM miR-331 inhibitor, and siRNA+miR-331 inhibitor, respectively. The protein concentration was measured by a Bio-Rad protein assay kit (Bio-Rad, Hercules, CA, USA). Then, the protein was separated using 10% SDS-PAGE and transferred to a 0.22 μm nitrocellulose membrane (Bio-Rad). The membrane was incubated with anti-HER2, anti-Akt, anti-p-Akt, anti-ERK1/2, and anti-p-ERK1/2 (Santa Cruz Biotechnology, Santa Cruz, CA, USA) at 4°C overnight. Then, the horseradish peroxidase- (HRP-) labeled goat anti-mouse IgG (Santa Cruz Biotechnology) was added, and the membrane was incubated for 1 h. The β-actin (RiBoBio) was used as the reference protein.
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6

Protein Expression Analysis by Western Blot

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Protein expression was evaluated by densitometric analysis of Western blot experiments performed on total cell lysates (20 μg of proteins) as described [24 (link)]. β-actin was used as quantitative loading control.
Total cell lysates (1 mg/mL) were incubated with 10% protein G Sepharose (Amersham Biosciences) and with either anti-HER2 (Santa Cruz Biotechnology) or anti-EGFR specific Abs overnight at 4°C. Immunoprecipitates were washed, denatured, resolved by 7% SDS-PAGE under reducing conditions and blotted with the related Abs, to detect the presence of PC-PLC, HER2 and EGFR in the co-immunoprecipitated complexes, as described [21 (link)].
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7

Molecular Mechanisms of HER2 Signaling Regulation

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Anti-HER2 was purchased from NeoMarker (Waltham, MA, USA), anti-ER, anti-PR, anti-c-Src, anti-p-HER2 (Tyr1248), anti-p-c-Src (Tyr416), and anti-p-ER (Ser118) were purchased from CST (Danvers, MA, USA). Anti-actin, anti-c-Cbl, anti-Caveolin1 and Anti-HER2 labeled with phycoerythrin were obtained from Santa Cruz Biotechnology (Dallas, TX, USA). Tamoxifen, 17-β estradiol, Nystatin, PP2were purchased from Sigma (St. Louis, MO, USA). The c-Cbl-3 × flag-CMV9 plasmid was constructed by Taihe Biotechnology (Beijing, China). The HER2-pEGFP-N1 plasmid was constructed by GENEWIZ (Suzhou, China). The PSVL-cbl-70Z plasmid was kindly gift from Professor Kiyonao Sada (Kobe University Graduate School of Medicine). The lentiviral system was purchased from Genechem (Shanghai, China).
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8

Western Blot Analysis of Signaling Proteins

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Western blotting was performed as previously described [31 (link)]. The antibodies used were as follows: monoclonal anti-JWA (1 : 500, contract produced by AbMax, Beijing, China); monoclonal anti-α-tubulin, anti-β-actin (loading control) (1 : 2000, Beyotime, Haimen, Jiangsu, China); monoclonal anti-P-ERK, anti-ERK, anti-P-AKT(473), anti-AKT, anti-Caspase 3, anti-EGFR, anti-HER3 (1 : 1000, Cell Signaling Technology, Danvers, MA, USA); monoclonal anti-Ub (1 : 500) and polyclonal anti-HER2 (1 : 1000) (Santa Cruz, Dallas, TX, USA); monoclonal anti-c-Cbl (1 : 2000), anti-Lamp2 and anti-HER2 (1 : 250, Abcam, USA).
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9

Comprehensive Protein Expression Analysis

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All chemicals were purchased from Sigma. Anti-TRAP1, anti-Hsp90, anti-Cyt c, anti-Hsp70, anti-Drp1, and anti-Bax antibodies were purchased from BD Biosciences; anti-Grp94, anti-Akt, anti-Chk1, anti-c-FLIP, anti-HER2, anti-Sorcin, and anti-SDHB antibodies were purchased from Santa Cruz Biotechnology; anti-PHB, anti-pS9-GSK3β, anti-GSK3β, anti-COX-2, anti-HSF1, anti-SIRT3, and anti-calcineurin A antibodies were purchased from Cell Signaling Technology; an anti-calcineurin regulatory subunit B antibody was purchased from Sigma; an anti-CypD antibody was purchased from Thermo; and an anti-β-actin antibody was purchased from MP Biomedicals.
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10

Western Blot Analysis of Signaling Proteins

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Protein extracts (30 μg) were separated in a polyacrylamide gel (Sigma-Aldrich), transferred to a nitrocellulose membrane and nonspecific binding blocked with PBS-5% non-fat dried milk at RT. The membranes were then rinsed and incubated overnight with anti-HER2 (1:1000), anti-pHER2 (1:350), anti-TBR1 (1:300), anti-TBR2 (1:300), anti-CCND1 (1:300, Santa Cruz Biotechnology), anti-CDK4 (1:400, Abcam), anti-pSMAD2/3 (1:1000 Cell Signaling), anti-SMAD2/3 (1:1000, Cell Signaling), anti-TERK1 (1:500, Santa Cruz Biotechnology), anti-pERK1/2 (1:1000, Cell Signaling) or anti-b-Actin (1:4000; Sigma-Aldrich).
The blots were incubated with HPRT-conjugated bovine anti-goat (1:2500; Santa Cruz Biotechnology), goat anti-mouse (1:2500, Jackson ImmunoResearch) or goat anti-rabbit secondary antibodies (1:5000, BioRad). The membranes were thoroughly rinsed in TBS 0.1% Tween 20 and the HPRT-coupled secondary antibody was revealed with enhanced chemiluminescence Western blotting detection reagents (GE Healthcare). Emitted light was captured on Hyperfilm (GE Healthcare).
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