The largest database of trusted experimental protocols

A1rmp microscope

Manufactured by Nikon
Sourced in Japan

The Nikon A1RMP microscope is a high-performance research-grade microscope designed for advanced imaging applications. It features a modular design that allows for customization to meet specific research requirements. The A1RMP provides superior optical performance and flexibility, making it a versatile tool for a wide range of laboratory applications.

Automatically generated - may contain errors

17 protocols using a1rmp microscope

1

Tracking Targeted Liposome Uptake in Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Temporal and spatial tracking of targeted liposomes was studied using multiphoton confocal microscopy. MB49 cells were cultured in complete FBS-supplemented DMEM at a cell density of 35,000 cells/well in 4 chambered slides. After 24 h, the culture media was replaced with serum-free medium containing the FAP peptide-targeted liposomes and incubated for 2 h, followed by removal of the liposome suspension, rinsing of the cells three times with FBS-supplemented DMEM, and incubation for 0 or 10 h at 37 °C. The cells were then stained with AlexaFluor® 680 WGA for 10 min to reveal the plasma membrane, washed with PBS (2X), and then incubated with LysoTracker® Blue DND-22 for 10 min to stain lysosomal compartments, before washing with PBS (2X) and imaging by confocal microscopy with a Nikon A1R MP microscope equipped with a 60X oil immersion objective.
+ Open protocol
+ Expand
2

Multiplex Imaging of Cellular Organelles

Check if the same lab product or an alternative is used in the 5 most similar protocols
Imaging was performed using an A1RMP microscope equipped with four gallium arsenide phosphide non-descanned detectors (Nikon, Tokyo, Japan). An N40XLWD-NIR objective lens (Nikon) was attached to the inverted microscope. The excitation wavelength at 880 nm was used in the experiments with CYTO-ID. In the other experiments, the excitation wavelength at 820 nm was used. Hoechst 33258 and CTB signals were detected using a 495-nm long-pass dichroic mirror and a bandpass barrier filter 450/50 before the 1st detector. The CTG, MBG, CYTO-ID, and Alexa Fluor 488 signals were detected using a 560-nm long-pass dichroic mirror and a bandpass barrier filter 525/50 before the 2nd detector. TMRE signals were detected by reflecting a 593-nm long-pass dichroic mirror and passing through a bandpass barrier filter 575/25 before the 3rd detector. The LTR, MTR, and Alexa Fluor 594 signals were detected by passing through a 593-nm long-pass dichroic mirror and a bandpass barrier filter 629/56 before the 4th detector. The z-interval was set at 0.6 μm. For live imaging, an epidermal model was incubated at 37 °C without CO2 regulation and humidified in an incubator chamber (INU-TIZB-NB, Tokai Hit, Shizuoka, Japan) on a piezo stage driven by a Nano-Drive (Mad City Labs, Madison, WI) controller.
+ Open protocol
+ Expand
3

Two-Photon Imaging of Cortical Spreading Depression

Check if the same lab product or an alternative is used in the 5 most similar protocols
During two‐photon imaging, the mice were anesthetized with 1% isoflurane. Body temperature was maintained with a heating pad throughout the imaging session. To avoid the risk of evoking abnormal cortical neural activity by sulforhodamine 101 [34], images were acquired using a Nikon A1RMP microscope equipped with an Apo LWD 25 × 1.10 objective (Nikon, Tokyo, Japan) after about 60 min from application of sulforhodamine 101. For imaging spontaneous activity, 512 × 512 pixel images (field size 254 × 254 µm at depths of 200 µm and 250 µm) were acquired at 15 frames per second for 5 min. From each mouse, two fields of view were imaged each at 200 µm and 250 µm deep.
Cortical spreading depression was induced after imaging spontaneous activity. Imaging was started immediately after the application of 2 μL of 1 m KCl to the hole. Images in 512 × 512 pixels (field size 508 × 508 µm) were acquired at one frame/ 3 s at a depth of 200 µm for 30 min.
+ Open protocol
+ Expand
4

Visualizing Intestinal Vasculature and Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
We rendered intestinal tissue transparent using Focus Clear (CelExplorer Labs Co, Hsinchu, Taiwan), according to the manufacturer’s instructions. Briefly, anesthetized mice were injected intravenously with Hoechst 33342 (Thermo Fisher Scientific, Waltham, MA) and dextran-tetramethylrhodamine (Thermo Fisher Scientific). After 30 minutes, mice were killed and the small intestinal tissue was collected, fixed, and incubated in Focus Clear. Samples were mounted on stage with Mount Clear (CelExplorer Labs Co). Z-stack images were taken at intervals of 0.425 μm using an A1RMP microscope (Nikon, Tokyo, Japan). Three planes were chosen at intervals of 131 slices, and GFP+ cells were detected automatically according to the algorithm of Imaris software (Bitplane, Zurich, Switzerland). The number of cells in contact with blood vessels was counted manually.
+ Open protocol
+ Expand
5

Multiphoton Microscopy of Kir2.1 Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
HEK293-Kir2.1 cells were transfected as described above. Cells were imaged with an A1R MP+ microscope (Nikon, Japan) fitted with 20× 0.75NA dry objective, a 525/50 nm filter, gallium arsenide phosphide (GaAsP) detectors, and a titanium:sapphire Chameleon Ultra I laser (Coherent, Santa Clara, CA) with a 80 MHz repetition rate and a pulse width of 140 fs (measured at 800 nm). The laser was tuned between 700 nm and 1040 nm, keeping the laser power at 10 mW across the spectrum. However, this system did not pre-compensate laser pulses for dispersion in the microscope optical path. Pulse width is therefore expected to vary with wavelength (Müller et al., 1998 (link)), thereby impacting two-photon excitation absorption efficiency and distorting excitation spectra over those acquired by a pre-compensated system. Laser scanning was performed using galvanometric mirrors. Each image pixel was sampled with a dwell time of 12.1 µs. To evaluate the impact of photobleaching, we acquired images at 900 nm both before and after each wavelength scan. We also compared spectra obtained by scanning from 700 nm to 1040 nm to those produced in the reverse direction (1040 nm to 700 nm). Both methods demonstrated that photobleaching was negligible, and we therefore did not correct for photobleaching.
+ Open protocol
+ Expand
6

Optogenetic Stimulation of Channelrhodopsin

Check if the same lab product or an alternative is used in the 5 most similar protocols
Channelrhodopsin activation was achieved with a custom LED device including an optic fiber cable mounted on a 485 nm blue LED (Cree Lighting Inc., Durham, NC) connected to a SLB-1200-1 universal LED driver (Mightex, Pleasanton, CA). The end of the optic fiber cable was placed a few millimeters away from the cells with a MP-285 micromanipulator (Sutter Instrument, Novato, CA). Light intensity was calibrated at 0.38 mW/mm2 using a PM20A optical power meter (Thorlabs, Newton, NJ). Light pulses were Transistor-Transistor Logic (TTL) triggered with pClamp10.6 software using the analog-input of the LED driver. For some sets of experiments, channelrhodopsin was stimulated using a Spectra X (Lumencor, Beaverton, USA) directly coupled to the epifluorescent port of the Nikon A1R-MP microscope. Light pulses were TTL triggered with patchmaster software.
+ Open protocol
+ Expand
7

Intravital Imaging of Leukocyte Dynamics

Check if the same lab product or an alternative is used in the 5 most similar protocols
The dynamics of DiD-positive leukocytes were observed using an intravital 2-photon microscope. A female 3-week-old WKY rat was injected with 50 μg TF78 and DiD-labeled ASCs (1 × 106 cells) on day 0. On day 2, the rat was anesthetized with a mixture of medetomidine midazolam and butorphanol and injected with 0.25 μg/g body weight FITC anti-rat CD45 (Biolegend, 202226) and 0.01 mg/g body weight rhodamine-70k dextran. Then, the spleen was exteriorized with a lateral incision and extended over the imaging platform. Time-lapse images were acquired at 30 s per frame using a Nikon A1RMP microscope.
+ Open protocol
+ Expand
8

Immunofluorescence Analysis of hES H1 Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
For immunofluorescence analysis, hES H1 cells were seeded on Matrigel-coated coverslips using Accutase, fixed with 4% formaldehyde for 20 min, permeabilized with 0.5% Triton for 10 min, and stained with indicated antibodies and/or Hoechst 33342. Images were taken using a Nikon A1R+ MP microscope and processed using ImageJ.
+ Open protocol
+ Expand
9

Two-Photon Imaging of Retinal Calcium Dynamics

Check if the same lab product or an alternative is used in the 5 most similar protocols
Two-photon functional imaging in the retina was performed using a Nikon A1R MP microscope equipped with a 4-channel GaAsP NDD and an Apochromat 25X/1.1 NA water-immersion objective (Nikon). Excitation was provided by a Chameleon Ultra II Mode-locked titanium-sapphire laser (Coherent) tuned to 930 nm. Time-series of visually evoked calcium responses were acquired at a rate of 4 Hz and 0.248 × 0.248 μm resolution (512 × 256 pixels). Following activation of the laser scanning, we waited 60 seconds before starting the visual stimulation to ensure the retina adapted to the background light level caused by the multi-photon laser. 4 dpf crystal Tg(elavl3:GCaMP6f) larvae were first paralysed for 10–15 minutes in α-bungarotoxin (1 mg/ml; Biotium) prepared in Danieau solution. Subsequently, larvae were immobilized in 2% low melting point agarose (Sigma) and mounted on a raised custom-made glass platform with the dorsal side up (45° angle tilt) and one eye facing an LCD screen (see Visual stimulation) that was placed underneath a custom-made Danieau-filled chamber. Imaging was performed in the afternoon (1–8 pm).
+ Open protocol
+ Expand
10

Spheroid Diameter, Viability, and Imaging

Check if the same lab product or an alternative is used in the 5 most similar protocols
The diameter of the spheroids was measured using a microscope with an image analysis system (BZ-X710, KEYENCE, Osaka, Japan). Twenty spheroids were collected using a micropipette and were dispersed using 0.25% (w/v) trypsin-EDTA. After staining with trypan blue solution, the number of live cells was measured by counting the unstained cells using microscopy, and the number of live cells in each spheroid was calculated. The cell viability in spheroids could not be calculated because dead cells were hardly liberated from cell debris after dispersion of the spheroids.
Live/Dead Imaging The spheroids were stained with 1 µM CFSE and 5 µg/mL propidium iodide in Opti-MEM (30 min, 37 °C). After washing three times with phosphatebuffered saline (PBS), the spheroids were fixed with 4% paraformaldehyde in phosphate buffer (Nacalai Tesque, Inc.) overnight at 4 °C. After fixing, the spheroids were optically cleared using the ScaleS method. 21) (link) In brief, the spheroids were incubated with ScaleSQ(0) (22.5% (w/v) D[-]-sorbitol and 9.1 M urea [pH 8.4]) for 24 h at 4 °C and then with ScaleS4(0) (40% (w/v) D[-]-sorbitol, 10% (w/v) glycerol, 4 M urea, and 20% (v/v) dimethyl sulfoxide) for 24 h at 4 °C. The optically cleared spheroids were observed using confocal fluorescence microscopy (A1R MP microscope, Nikon, Tokyo, Japan).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!