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21 protocols using anti α actinin

1

Cytoskeletal Protein Visualization Protocol

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The following primary antibodies were used (dilution is indicated for immunofluorescence unless stated otherwise): anti-α-actinin (ab18061, Abcam, 1:100 dilution), anti-HA (3F10, Sigma-Aldrich, 1:200 dilution), anti-vinculin (#V9131, Sigma-Aldrich, 1:400 dilution), anti-zyxin (sc-6437, Santa Cruz, 1:40 dilution), anti-talin (#T3287, Sigma-Aldrich, 1:100 dilution), anti-β-actin (#MCA5775GA, Bio-Rad Laboratories, 1:200 dilution, 1:2000 for western blot), anti-γ-actin (#MCA5776GA, Bio-Rad Laboratories, 1:200 dilution, 1:2000 for western blot), anti-actin (#A2066, Sigma-Aldrich, 1:5000 dilution for western blot), anti-myosin IIA (#909802, BioLegend, 1:100 dilution), and anti-phospho-myosin light chain (#3671, Cell Signalling Technology, 1:100 dilution). Secondary antibodies conjugated to Alexa647, Alexa555, or Alexa568 were used (Life Technologies, 1:400 dilution). Actin was stained with Alexa488/Alexa633-conjugated phalloidin (Life Technologies, 1:200 dilution). Blebbistatin was purchased from Sigma-Aldrich (#B0560, 50 μM for 60 min).
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2

Immunocytochemistry Analysis of C2C12 Myogenesis

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Immunocytochemistry of C2C12 myoblasts and myotubes was performed as described previously (Osana, Kitajima, et al., 2020; Osana, Murayama, et al., 2020). Samples were incubated with primary antibodies at 4°C overnight following blocking/permeabilization with phosphate‐buffered saline containing 0.05% Triton X‐100% and 5% goat serum for 60 min at room temperature. The immunocytochemistry of anti‐PSA (1:100; Santa Cruz Biotechnology), anti‐Ki67 (1:500; Abcam), anti‐MyHC (1:200; Developmental Studies Hybridoma Bank), anti‐α‐actinin (1:200; Abcam), anti‐β‐actin (1:2000; Cell Signaling Technology), and nuclei was visualized using appropriate species‐specific Alexa Fluor 488‐ or Alexa Fluor 555‐conjugated secondary antibodies and Hoechst 33342 (Thermo Fisher Scientific). Samples were then examined using an Olympus fluorescence microscope (Olympus Corporation). The relative ratio of Ki67‐positive cells was calculated by dividing the number of Ki67‐positive cells by the total number of nuclei, namely the total number of cells. The differentiation index was calculated by dividing the number of nuclei in myotubes (MyHC‐positive elongated cells) by the total number of nuclei. The length of myotubes and the aspect ratio, which represents the ratio of width to length, were measured using ImageJ Fiji software (Schneider et al., 2012).
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3

Immunofluorescence Staining of miR-26a-5p

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Treated H9C2 cells were climbed in 24-well plates. On the second day, cells were transfected with miR-26a-5p agomir, miR-26a-5p inhibitor or the corresponding controls and treated with PE for 48 h for immunofluorescence staining. Then, the medium was removed and rinsed 3 times with 1 × PBS. The cells were fixed with 4% paraformaldehyde at room temperature for 20 min, and then 0.1% Triton X-100 solution was added at room temperature for 10 min. The cells were blocked with 3% BSA solution at 37 °C for 90 min. After that, the cells were incubated with primary antibody including anti- α-actinin (1:200, abcam, UK) or anti-LC3 (1:1000, CST, Danvers, MA, USA) at 4 °C overnight, followed by incubation with fluorescent secondary antibody (1: 2000) at 37 °C for 1.5 h in the dark. Then, the cells were stained with 4′, 6-diamidino-2-phenylindole (DAPI) for 5 min at room temperature. After mounting, the cells were observed under a fluorescent microscope (ECLIPSE Ti-S; Nikon, Tokyo, Japan).
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4

Immunocytochemical Staining of Rat Heart

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Rat heart slides were incubated in blocking buffer for 2 h. Then, the primary antibodies diluted in blocking buffer were used to incubate cell at 4 °C overnight. PBS was used to wash the cells three times, and the corresponding secondary antibody was diluted in the blocking buffer solution and used for staining at room temperature for 1 h. Stained slides were then rinsed and mounted in a mounting medium containing DAPI (YeaSen, China). Fluorescence microscope (Carl Zeiss, Thuringia, Germany) was used to observe the images. Primary antibodies and dilutions were used in immunocytochemical staining (ICC) including anti-Ki67 antibody (Abcam) and anti-α-actinin (Abcam). Secondary antibodies and dilutions used in ICC included goat anti-rabbit IgG2a Alexa Fluor 488 (Yeasen 33106ES60, 1:100, Shanghai, China) and goat anti-mouse Cy3 (Yeasen 33208ES60, 1:100, Shanghai, China).
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5

Immunofluorescence Analysis of Cardiac Markers

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After differentiated for 15 days, the cells were fixed and incubated with primary antibodies (anti-MLC-2V, anti-α-actinin, anti-Ki67, anti-MHC, anti-connexin 43 (Cx43) and anti-cardiac troponin T (cTnT), 1:200, all from Abcam, Cambridge, MA, United States) for 60min at room temperature.
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6

Cardiomyocyte Structural Imaging with TPEF-SHG

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Cardiomyocytes were fixed with 4% paraformaldehyde. After permeabilizing the cells using Triton X-100 and blocking the active sites in blocking solution (0.2% Triton X-100, 5% normal serum and 1% bovine serum albumin in phosphate buffered saline) for 30 min at room temperature, primary antibodies, including anti-α-actinin (Abcam), anti-connexin-43 (Santa Cruz), anti-MyHC (Abcam), anti-plakoglobin, and anti-desmin (Novus Biologicals) were applied. After being thoroughly washed, secondary antibodies (goat-anti-mouse and goat-anti-rabbit) conjugated with FITC or Alexa-568 were applied. The labeled cells were then immersed in mounting solution containing DAPI and imaged under a fluorescence microscope. Sarcomeric structure was observed using our lab-built TPEF-SHG imaging system using a procedure similar to that in our previous report [Liu et al., 2013a (link)]. Briefly, cells were excited by an 830-nm femtosecond laser beam, and the two-photon fluorescence signal emitted by the fluorescently labeled proteins was collected from the TPEF channel while the SHG signal from the myosin filaments was collected from the SHG channel. The TPEF and SHG signals were collected simultaneously and 2D images were processed and reconstructed using ImageJ software (http://rsbweb.nih.gov/ij/) and edited in MicrosoftV® Paint.
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7

Immunofluorescence Characterization of Cardiomyocytes

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Cells were fixed in 4 % paraformaldehyde for 30 min, permeabilized for 15 min with 0.25 % Triton X-100, and blocked in 5 % BSA for 15 min. The cells were then incubated with the corresponding primary antibodies for 4 h at room temperature. Primary antibodies (1:200 dilutions) included anti-MLC-2 V, anti-α-actinin, anti-Ki67, anti-connexin 43 (Cx43) (rabbit polyclonal, Abcam) and mouse anti-cardiac troponin T (cTnT) (Abcam). After adequately washed with PBS, cells were incubated at room temperature for 1 h to corresponding FITC-conjugated anti-rabbit or Cy3-conjugated anti-mouse antibodies (Abcam, 1:200 dilution). DAPI (Invitrogen, 1:1,000 dilution) staining was used to identify nuclei. Analysis was performed using a confocal microscope (FV1000, Olympus).
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8

Immunofluorescent Staining of Extracellular Matrix Proteins

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CMs were plated in glass-bottomed wells coated with Matrigel (GFR, BD Biosciences, Franklin Lakes, NJ, USA). Following the indicated treatments, cells were fixed with 4% paraformaldehyde as previously described [21 (link)]. Indirect immunofluorescent staining was performed using the following antibodies: anti-α6 (1:25; hybridoma-derived [62 ]), anti-α-actinin (1:250, Abcam, Cambridge, Cambridgeshire, UK), anti-mouse Alexa fluor 488 (1:1000, Invitrogen, Life Technologies, Woburn, MA, USA), and anti-rabbit Alexa fluor 568 (1:000, Invitrogen, Life Technologies, Woburn, MA, USA).
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9

Immunofluorescence Analysis of Apoptosis Markers

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Heart sections (4 μm) were fixed with 4% paraformaldehyde, blocked with 10% fetal bovine serum (FBS, #35-081-CV, Corning Inc., Corning, NY, USA), and permeabilized with Triton X-100. Anti-p-Ser9-GSK-3β (1:200, #93235, Cell Signaling Technology, Danvers, MA, USA), anti-cleaved-capsase-1 (1:200, #PA5-99390, Invitrogen, Carlsbad, CA, USA), anti-GSDMD-NT (1:200, #PA5-115330, Invitrogen) and anti-ASC (1:200, #6741R-A5555, Bioss) antibodies were incubated overnight at 4°C, followed by secondary antibodies conjugated to Alexa Fluor 680 (1:500, #A10043, Invitrogen) and 4’,6-diamidino-2-phenylindole dihydrochloride (DAPI) (#S2110, Solarbio, China). Anti-α-actinin was purchased from Abcam (Cambridge, MA, USA, 1:200, #ab68194). All slices were analyzed using the EVOS M7000 Imaging System (Thermo Fisher Scientific, Waltham, MA, USA).
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10

Immunofluorescence Staining Protocol for Cell Characterization

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Cells were fixed with 4% PFA in 1X DPBS for 10 minutes, washed twice 1X PBS, permeabilized for 20 minutes in 0.1% Triton X-100 1X PBS, washed twice with 1X PBS, blocked for at least 60 minutes in 5% BSA 1X PBS, stained overnight at 4°C with primary antibody diluted in 5% BSA 1X PBS, washed three times with 1X PBS, stained for 60 minutes with secondary antibody diluted in 5% BSA 1X PBS, and lastly washed three times with 1X PBS before imaging. Primary antibodies and relevant dilutions were as follows: anti-Tuj1, 1:500 (Abcam, # ab7751); anti-Alb, 1:500 (Abcam, ab207327); anti-cTnT, 1:400 (Thermo Fisher, # MA5-12960); anti-αActinin, 1:500 (Abcam, ab68167); anti-Connexin-43, 1:500 (Sigma, C6219). Secondary antibodies and relevant dilutions were as follows: AlexaFluor 488 anti-mouse, 1:500 (Jackson Immuno, # 715-545-150), AlexaFluor 647 anti-mouse, 1:500 (Jackson Immuno, # 715-605-150), AlexaFluor 488 anti-rabbit, 1:500 (Jackson Immuno, # 715-545-152), AlexaFluor 647 anti-rabbit, 1:500 (Jackson Immuno, # 715-605-152). The quantification of the images was performed with CellProfiler(Stirling et al., 2021 (link)).
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