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4 protocols using a0830

1

Western Blot Analysis of Mitochondrial Proteins

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Laemmli buffer containing 4% SDS, 10% β-mercaptoethanol (M6250; Sigma-Aldrich), 20% glycerol (GI345; Melford), 0.004% blue bromophenol (A2331,0025; AppliChem), and 0.125 M Tris-HCl was added to protein lysates, followed by boiling at 95°C for 10 min. Samples were separated on SDS-PAGE and transferred to a nitrocellulose (Macherey-Nagel) or a polyvinylidene difluoride (Merck) membrane. The membranes were blocked with 5% milk (A0830; PanReac AppliChem) and probed with the following antibodies: anti–β-Actin (ab8227; Abcam), anti–β-Tubulin (ab15568; Abcam), anti-CBS (14787-1-AP; Proteintech), anti-CSE (12217-1-AP; Proteintech), anti-MPST (HPA001240; Atlas Antibodies), anti-MTCO1 (ab14705; Abcam), anti-Citrate Synthase (ab96600; Abcam), anti-SOD2 (13141; Cell Signaling), anti-TOM40L (ab236421; Abcam), anti-TIM50 (ab109436; Abcam), anti-HIF1α (sc-13515; Santa Cruz Biotechnology), anti-H3 (ab176842; Abcam), anti-V5 (Merck), anti-HA (H6908; Sigma-Aldrich), and anti-Biotin (HRP conjugate; 5571; Cell Signaling). Immunoblots were next incubated with a secondary antibody (anti-rabbit [AP132P; Merck] or anti-mouse [7076; Cell Signaling]) and visualized using the Western HRP substrate (Merck). ImageJ software was used to quantify the expression levels of the proteins.
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2

Protein Detection via Western Blot

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Detection of specific proteins among the experimental series required a proper sample preparation, in which, for each specimen, the Laemmli buffer 2X (S3401; Sigma-Aldrich) was mixed with an equal protein amount before heat denaturation (5 min at 95 °C). Subsequently, loading a protein range from 15 to 30 µg, electrophoresis was performed in sodium dodecyl sulfate polyacrylamide gel (SDS-PAGE). After moving proteins to the nitrocellulose membrane (Amersham Protran Premium; Cytiva, Marlborough, MA, United Stetes), foils were firstly blocked for one hour in no-fat milk (5% w/v) (A0830; PanReac Applichem, Chicago, IL, USA) and then incubated overnight at 4 °C with specific primary antibodies. The next morning, HRP secondary antibodies, recognizing the related primary species, were applied to the membrane for 1 h at room temperature. Finally, chemiluminescence was detected with the Chemi Doc XRS (Bio-Rad, Hercules, CA, USA) instrument using liteablot chemiluminescent as a substrate (EMP011005; EuroClone). Each incubation step was preceded and followed by three washes in TBS plus 0.05% Tween-20 (TC287; HIMEDIA, Mumbai, India) (T-TBS).
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3

Western Blot Analysis of PKA-Cα

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Approximately 10–30 µg of cell protein extract and 5–50 µg of serum or urine proteins were loaded in 10% acrylamide gels. Later, proteins were transferred onto a nitrocellulose membrane (GEH10600008, Cytiva, Marlborough, MA, USA) by Mini Trans-Blot (Bio-Rad Laboratories, Hercules, CA, USA). In order to reduce both noise and aspecific bond, potential free spots on nitrocellulose film were covered with non-fat milk (5% w/v) (A0830, PanReac Applichem, Chicago, IL, USA) for one hour. Anti-PKA-Cα (sc-903, Santa Cruz Biotechnology, Dallas, TX, USA) was subsequently incubated overnight at 4 degrees. The next day, HRP-conjugated goat anti-rabbit (#7074, Cell Signaling Technology) was added to the membranes for one hour at room temperature. Washing with TBS Tween-20 (TC287, HIMEDIA, Mumbai, India) preceded and followed each single procedure. Lastly, using enhanced chemiluminescence reagent (E-IR-R301, Elabscience, Houston, TX, USA), immunoblotting bands were detected and acquired by Chemi-Doc XRS (Bio-Rad Laboratories).
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4

Western Blot Analysis of Protein Expression

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Cells were harvested by centrifugation and resuspended in lysis buffer (NaCl 150 mM, Tris HCl pH 8 50 mM, EDTA 2 mM, NP-40 0.5%, glycerol 10%, protease inhibitor cocktail (Sigma Aldrich#P8340). A total of 40 ug of total protein extract were loaded on a 12% SDS PAGE gel and gels were blotted by semi-dry protein transfer to 0,45 µm nitrocellulose membrane (GE10600002 Amersham Protran). After membrane blocking with 5% (v/v) non-fat milk (A0830 PanReac Applichem) in TBS-tween 0.1%, membranes were incubated with specific antibodies and developed with chemiluminescence reagents (Supersignal West Pico PLUS Chemiluminescent Substrate Thermo Scientific (Waltham, MA, USA) 34577 for GAPDH and β-tubulin Western blot; Immobilon Western Merck WBKLS0500 for FOS Western blot). Images were acquired with Chemidoc MP Imaging System Bio-rad.
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