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1

Acetylated Myelin Basic Protein Peptides

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The acetylated N-terminal peptides of myelin basic protein, MBPAc1-9 [4K] (AcASQKRPSQR) and [4Y] (AcASQYRPSQR) were synthesized by GL Biochem Shanghai. In vitro stimulations and assays were performed in complete RPMI (Lonza, supplemented with 5% fetal bovine serum (Biosera), 20mM HEPES, 2mM L-glutamine, 100U/ml penicillin, 100μg/ml streptomycin and 50mM 2-mercaptoethanol). A list of antibodies and details of their use in this study can be found in Table 1.
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2

Generation of Monocyte-Derived Dendritic Cells

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Peripheral blood mononuclear cells (PBMCs) were isolated from buffy coats of healthy volunteers (Sanquin, Amsterdam, The Netherlands) by centrifugation on a Ficoll gradient. First, blood was gently mixed with PBS containing 1% citrate and carefully layered on top of Ficoll. After 30 min centrifugation at 700 × g, the interphase containing monocytes and lymphocytes was collected. Next, monocytes and lymphocytes were washed with PBS/Citrate at 400 × g for 10 min and the pellet was resuspended in complete RPMI. To isolate monocytes, PBMCs were carefully added on top of a Percoll layer (GE Healthcare, Chicago, U.S.) at a concentration of 10 × 106 cells/mL and centrifuged at 400 × g for 40 min. Again the interphase was collected and tubes were filled with PBS/Citrate prior to a 10 min centrifugation at 400 × g. After washing three times with PBS/Citrate, pellets were resuspended in complete RPMI. MoDC were generated by culturing monocytes for 5–7 days at a concentration of 1.25*106/mL in complete RPMI (Lonza, Basel, Switzerland) containing 500 μ/mL IL-4 (ImmunoTools, Friesoythe, Germany) and 800 μ/mL Granulocyte Macrophage Colony stimulating Factor (GM-CSF) (ImmunoTools) using T75 flasks (Greiner, Kremsmünster, Austria).
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3

Comparative Analysis of HPV Cell Lines

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The human Ca Ski (HVP16, 400 to 600 copies per cell) and SiHa (HVP16, 1 to 2 copies per cell) cell lines, the HeLa (HPV18, 20 to 40 copies per cell) cell line and the HPV negative C33-A cell line were obtained from ATCC (Manassas, VA, USA) and routinely tested for the presence of HPV in our laboratory. Ca Ski and SiHa cells were maintained at 37 °C (5 % CO2) in complete RPMI or DMEM respectively (Lonza, Levallois-Perret, France) supplemented with 10 % fetal bovine serum (FBS; Lonza), 5x104 U/L penicillin/streptomycin (Lonza) and 2 mM L-glutamine (Lonza). HeLa and C33-A cells were grown in complete EMEM (Lonza) supplemented with 10 % FBS, 5x104 U/L penicillin/streptomycin and 2 mM L-glutamine.
HPV positive and HPV negative cells were diluted at indicated concentrations in the STM (Digene/Qiagen, Courtaboeuf, France) as reference medium and in the Novaprep® HQ+ Orange medium (Novacyt, Vélizy-Villacoublay, France), an alcohol-based fixative primarily dedicated to liquid-based cytology. Because pretreatment of viscous samples with dithiothreitol (DTT), a mucolytic agent, may be recommended to provide mucus-free single-cell suspensions, Novacyt also provided the Novaprep® HQ+ orange containing 0.03 % DTT. For convenience, the Novaprep® HQ+ medium without DTT will be referred to as HQ + A and the Novaprep® HQ+ medium with DTT will be referred to as HQ + B.
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4

Spleen Harvesting and Single Cell Isolation

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Mice were disinfected using 70% ethanol. Thereafter, abdominal skin was cut with sterile scissors and removed to expose the abdomen. Peritonea were then opened using a new pair of sterile scissors and tweezers, and the spleens harvested to pre-weighed 15 mL falcon tubes containing 5 ml of complete RPMI (Lonza, Switzerland) [10% heat-inactivated FBS (Lonza, Switzerland), 2 mM L-glutamine, 100 U/ml penicillin and 100 μg/ml streptomycin (BioWhittaker, Walkersville, MD, USA)] supplemented with 50 μM 2-mercaptoethanol (Sigma-Aldrich, MO, USA). Falcon tubes were re-weighed to obtain spleen masses. Splenic single cell suspensions were then obtained using FalconTM Cell Strainers (Fisher Scientific, MA, USA), and their concentrations determined using an EVETM automatic cell counter (NanoEntek, Seoul, Korea).
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5

Acetylated MBP Peptides Modulate T-cell Responses

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The acetylated N-terminal peptides of myelin basic protein, MBPAc1-9 [4A] (AcASQARPSQR), MBPAc1-9 [4K] (AcASQKRPSQR) and [4Y] (AcASQYRPSQR) were synthesized by GL Biochem Shanghai. In vitro stimulations and assays were performed in complete RPMI (Lonza). All flow cytometric staining was performed in fluorescent activated cell sorting (FACS) buffer. A list of antibodies and cytokines and details of their use in this study can be found in Table 1.

Antibodies and cytokines.

EpitopeCloneConjugationSupplierWorking concentration
CD4GK1.5Alexa700Biolegend2 μg/ml
CD45.1A20FITCeBioscience2 μg/ml
IL-10ES5-16E3APCeBioscience1 μg/ml
IFNγXMG1.2PerCP-Cy5.5eBioscience0.5 μg/ml
IL-411B11PEeBioscience0.5 μg ml
IL-17ATC11-18H10.1PEeBioscience1 μg/ml
IL-2JES6-5H4eFluor450eBioscience2 μg/ml
cMafSYMOF1eFluor660eBioscience2 μg/ml
T-bet4B10eFluor660eBioscience2 μg/ml
Phospho-STAT6CHI2S4NPerCP-eFlour610eBioscience2 μg/ml
CD3ε2C11NoneeBioscience1 μg/ml
CD2837.51NoneeBioscience2 μg/ml
IL-411B11NoneBioXCell10 μg/ml
IFN-γXMG1.2NoneBioXCell10 μg/ml
rmIL-12NoneNonePeprotech5 ng/ml
rmIL-4NoneNonePeprotech10 ng/ml
rhIL-2NoneNoneR&D Sytems20 U/ml

APC – allophycocyanin.

FITC - fluorescein isothiocyanate.

PE – phycoerythrin.

PerCP - peridinin chlorophyll protein complex.

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