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5 protocols using cdna reverse transcription kit

1

Quantifying mRNA Expression via qPCR

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Total RNA was extracted from cells using Trizol reagent (Beyotime, China). The cDNA was synthesized using cDNA Reverse Transcription Kit (Beyotime, China). The expression of mRNAs was quantified utilizing 7500 Fast Real-Time PCR System and SYBR Green PCR Master Mix. The relative mRNA expression was determined through the 2-ΔΔCt method with GAPDH as a reference gene.
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2

Quantitative Analysis of RMRP, miR-580-3p, and MICU1 in Ovarian Cancer

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Total RNA was extracted from patient samples and cell lines of ovarian cancer by using a TRIzol solution (Sigma) following the manufacturer's protocol. The RNAs were quantified. A total amount of 1 μg RNA was reverse transcribed to cDNA by a cDNA Reverse Transcription Kit (Beyotime, China). A quantitative real-time PCR experiment was processed using a Talent qPCR PreMix (TIANGEN, China) according to the manufacturer's instructions, and the values were detected by an Applied Biosystem (Thermo, USA). The relative levels of RMRP, miR-580-3p, and MICU1 were calculated by using a 2−ΔΔCt method. The β-actin and U6 were used as internal control for normalization of mRNA and miRNA RNAs, respectively.
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3

Quantitative Analysis of Gene Expression

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The transfected cells and tissues were collected in centrifuge tubes. To be specific, the cells were washed with PBS and the collected tissues were homogenized. Later, the total RNA was extracted using the Total RNA Isolation Kit (AM1914; Thermo Fisher) and miRNAs were extracted using the miRNA Isolation Kit (K157001; Thermo Fisher). After that, RNA purity and concentration were analyzed by the agarose gel electrophoresis and spectrophotometer (Evolution 350; Thermo Fisher), respectively. The reverse transcription was implemented as per the instructions of the cDNA Reverse-transcription Kit (D7170S; Beyotime), and the cDNA was amplified in the PCR instrument. The expressions of genes were detected on the RT-PCR system (ABI 7500; Applied Biosystems, CA, USA) with the PowerUp™ SYBR™ Green Master Mix (A25742; Thermo Fisher). All primer sequences are listed in Table 2. Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) and U6 acted as the reference genes. The data were analyzed by the 2−ΔΔct method.
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4

Comprehensive RNA Extraction and Quantification

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Total RNA was extracted from mouse lung tissues using TRIzol reagent (Thermo Fisher Scientific, Waltham, MA, USA). In short, TRIzol was added to a dry powder ground on lung tissue and left to stand at room temperature for 5 min. Then, 200 μL of chloroform was added to each sample, followed by a severe upside-down vortex. After standing for 5 min, the samples were centrifuged at 12,000 rpm and 4 °C for 15 min. The samples were divided into 3 layers. The aqueous phase was reserved with 400 μL of isopropyl alcohol, left for 10 min, and centrifuged at 12,000 rpm at 4 °C for 10 min. The supernatant was removed, washed with 70% ethanol, centrifuged, further dried, and then suspended in DEPC water. Finally, the concentration and purity of the extracted RNA were determined by ultraviolet spectrophotometry (One Drop, New York, NY, USA). According to the instructions of the cDNA Reverse Transcription Kit (Beyotime, Shanghai, China), primers were used to reverse-transcribe total RNA. Quantitative PCR was performed using SYBR Green (Beyotime, Shanghai, China) in a Roche LightCycler® 480 real-time PCR system. After the reaction was completed, the period threshold (Ct) was determined, and the relative RNA levels of each sample were calculated using the 2-ΔΔCt method and normalized to the GAPDH level. The gene-specific primers used in this study are listed in Table 1.
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5

RNA Extraction and qPCR Analysis Protocol

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After washing with ice-cold PBS, RNA extraction reagents (Junxin, Suzhou, China) were added to the cells, and the total RNA was isolated according to the manufacturer's instructions. A NanoDrop (Thermo Fisher Scientific, Waltham, Massachusetts, USA) was used to measure the concentration, purity, and integrity of RNA. Total RNA (1 μg) and a cDNA Reverse Transcription kit (Beyotime, Beijing, China) were used for reverse transcription. SYBR green I qPCR mix (Junxin) was used to perform real-time PCR analysis on a 7500 Fast Real-Time PCR System (Applied Biosystems, Waltham, MA). The PCR program consisted of initial denaturation at 95°C for 10 min, followed by 40 cycles of denaturation at 95°C for 15 s, annealing at 60°C for 20 s, and extension at 72°C for 30 s. The expression of β-actin was measured as a reference gene, and the differences in gene expression (fold change) were calculated using the 2 -ΔΔCT method. The primers for the target genes and β-actin are given in Table 1.
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