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9 protocols using stearic acid

1

Lipid Metabolism in HepG2 Hepatocellular Carcinoma

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Human liver hepatocellular carcinoma cell line (HepG2 cells) was
purchased from the American Type Culture Collection (ATCC; Manassas, VA). Cells
were cultured in EMEM (ATCC) supplemented with 10% fetal bovine serum
(Life Technologies; Carlsbad, CA) in 25 cm2 polystyrene flasks placed
in a Hera Cell 5% CO2 37°C incubator (ThermoFisher
Scientific; Waltham, MA). Routine passage was carried out every 2 or 3 days.
About 2 × 105 HepG2 cells were seeded per 6-cm plate
and serum-starved for 24 h before the following treatments: 50, 100 or 200
μg/ml human LDL-cholesterol (LDL-C) (Kalen Biomedical; Montgomery Vlg,
MD); 10, 30 or 90 μM simvastatin (Sigma; St Louis, MO); 100 nM insulin
(Sigma); 30 nM glucose (Sigma); 5 μM Bay-11 (Cayman; Ann Arbor, MI); 200
μM fatty acids conjugated with 0.2% BSA (30 mM) in 1%
ethanol. We treated HepG2 cells for 24 h with palmitic acid (Sigma), palmitoleic
acid, stearic acid, oleic acid, linoleic acid, linolenic acid, and
eicosapentaenoic acid (Cayman).
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2

Fatty Acid Extraction and Analysis

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Phytomonic acid (C18 CFA), palmitoleic acid (C16∶1), palmitic acid (C16∶0), oleic acid (C18∶1n9), and stearic acid (C18∶0) were obtained from Cayman Chemical (MI). Lauric acid (C12∶0), myristic acid (C14∶0), vaccenic acid (C18∶1n7), elaidic acid (trans-C18∶1n9), linoleic acid (C18∶2n6), arachidonic acid (C20∶4n6), and eicosapentaenoic acid (C20∶5n3) were from Nu-Chek Prep, Inc. (MN). All solvents were of GC-MS grade and all other reagents were of the highest grade available.
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3

Fatty Acid Modulation of Dendritic Cells

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Fatty acids (FAs) were purchased from Cayman and diluted in ethanol for all FAs [Palmitic acid (PA, C16:0), stearic acid(C18:0), palmitoleic acid (C16:1), oleic acid (OA, C18:1n-9), linoleic acid (LA, C18:2n6c), cis-8,11,14-eicosatrienoic acid (C20:3n6), cis-11,14,17- eicosatrienoic acid (C20:3n3), erucic acid (C22:1n9), eicosapentaenoic acid (EPA, C20:5n3), nervonic acid (C24:1n9), docosahexenoic acid (DHA, C22:6n3) and arachidonic acid (AA, C20:4n-6)] . The FAs-free medium was contained RPMI-1640 basic medium, 1×ITS medium supplement (Sigma) and 20 ng/ml GM-CSF without FAs supplement. Before addition to the culture medium, all FAs were conjugated to bovine serum albumin (BSA, fatty acid-free, Sigma) at the indicated concentration with FAs-free medium containing 1% BSA. The fatty acids were incubated with 1% BSA for 2 h before adding to DC. The concentration of saturated, monounsaturated, and polyunsaturated fatty acids in ITS medium was 20 µM. Half of the medium was discarded and replaced with fresh DC medium every other day. On day 6, DC were infected with the virus for 24 h and then analyzed by FACS.
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4

Cellular Signaling Pathway Analysis

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Dulbecco’s modified Eagle’s medium (DMEM) was obtained from Hyclone (Logan, UT, USA). Phosphate-buffered saline, fetal bovine serum (FBS), penicillin, and streptomycin were obtained from Gibco-BRL (Gaithersburg, MD, USA). The Cell Counting Kit-8 (CCK-8) was purchased from Dojindo Molecular Technologies Inc. (Rockville, MD, USA). The bicinchoninic acid assay (BCA) kit, IFN-γ and TNF-α were purchased from Thermo Fisher Scientific (Waltham, MA, USA). L-leucine, isoleucine, phenylalanine, tryptophan, linolenic acid, palmitic acid and stearic acid were purchased from Cayman chemical (Ann Arbor, MI, USA). The 15-hydroxy-5,8,11,13-eicosatetraenoic acid, stearidonic acid, eicosapentaenoic acid, arachidonic acid, and linoleic acid were obtained from Targetmol (Boston, MA, USA). MS-grade acetonitrile, water and formic acid were purchased from Thermo Fisher Scientific (Waltham, MA, USA). The p-STAT1, STAT1, p-IκBα, IκBα, p-p38, p38, p-ERK, ERK, p-JNK, JNK, p65, and β-actin antibodies were purchased from Cell Signaling Technology (Beverly, MA, USA). p50 and anti-proliferating cell nuclear antigen antibodies were obtained from Santa Cruz Biotechnology (Santa Cruz, CA, USA).
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5

Compounds Screening for Cell Viability

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Cells were seeded in 96-well plates (Corning 3917, 3125–6250 cells per well) and treated with compounds 24 h after plating. Compounds were purchased from Cayman Chemical with the exception of stearic acid, oleic acid, adrenic acid, linolenic acid, linoleic acid, docosahexaenoic acid, conjugated linoleic acid (16413), bovinic acid, arachidonic acid, Z-VAD-FML, and (+)-α-tocopherol (T3634), which were purchased from Sigma Aldrich. RSL3 was purchased from Selleckchem, catalpic acid, α-calendic acid, β-calendic acid, and β-ESA were obtained from Larodan Fine Chemicals, and punicic acid was purchased from Matreya LLC. Initial aliquots of ferrostatin-1, deferoxamine, and ML162 were generous gifts of the Dixon Lab (Stanford) and additional quantities were purchased from Cayman Chemical. The inhibitor of FSP19 (link) was purchased from ChemBridge Corp. Staurosporine was purchased from LC Sciences. Cell viability was measured using CellTiter-Glo Luminescent Cell Viability Assay (Promega) according to the manufacturer’s instructions. Luminescence was measured on an EnSpire Alpha (Perkin Elmer) using the integrated software package. Data were normalized to vehicle-treated or sensitizing agent-alone controls and IC50 curves were produced with GraphPad Prism (Version 8).
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6

Lipid Signaling Pathway Reagents

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αLA, DHA, capric acid, palmitic acid, oleic acid, Fura 2-AM, EGTA, 2-aminoethoxydiphenylborane (2-APB), pertussis toxin (PTX), 8-bromo-cyclic adenosine diphosphate ribose (8-Bro-cADPR), 2,2′-dihydroxyazobenzene (DAB), and thapsigargin were purchased from Sigma-Aldrich (St Louis, MO, USA). EPA, lauric acid, myristic acid, stearic acid, linoleic acid, γ-linolenic acid, TUG-891, and edelfosine were obtained from Cayman (Ann Arbor, MI, USA).
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7

Lipid Metabolic Pathway Reagent Procurement

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Tung oil and standard CLA oil were obtained from the Nisshin OilliO Group, Ltd. NADPH, NADP + , NADH, and NAD + were purchased from Oriental Yeast Co., Ltd. (Tokyo, Japan) . Trimethylsilyldiazomethane (TMSN 2 CH 3 ) , trimethylolaminomethane acetate (Tris-actate) , fluvoxamine, ticlopidine, montelukast, fluconazole, chlormethiazole, and ketoconazole were purchased from Tokyo Chemical Industry (Tokyo, Japan) . Indomethacin, niflumic acid, 2-chloroethyl ethyl sulfide (CEES) , 17-octadecynoic acid (17-ODYA) , and HET0016 were purchased from Sigma-Aldrich (St. Louis, MO) . Lauric acid, palmitic acid, stearic acid, oleic acid, linoleic acid, linolenic acid, arachidonic acid, prostaglandin A1, sulfaphenazole, and quinidine were obtained from Cayman Chemical Company (Ann Arbor, MI) . All other chemicals (sucrose, EDTA・2Na・2H 2 O, DTT, PMSF) were purchased from Wako Pure Chemical Industries, Ltd.
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8

Quantitative Lipidomic Analysis of Endocannabinoids

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Arachidonic acid (AA, 0525560–65), 2-arachidonoylglycerol (2-AG, 0613326–2), arachidonoyl ethanolamide (AEA, 0628207–1), stearic acid (SA, 1001002752), 1-stearoylglycerol (1-SRG, 1001036188), stearoyl ethanolamide (SEA, SLCF4292), Arachidonic acid-d8 (AA-d8, 0524707–106), 2-arachidonoylglycerol-d5 (2-AG-d5, 18469), and arachidonoyl ethanolamide-d8 (AEA-d8, 0489823–42) were purchased from Cayman Chemical. Methanol, acetonitrile, and ammonium acetate (HPLC grade) were purchased from Merck (Darmstadt, Germany). Ultrapure water was purified using a Milli-Q Reagent system (Millipore, Billerica, USA). All additional reagents utilized were of analytical grade.
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9

Lipid Effects on Orsay Virus Infection

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Six-well NGM dishes were prepared with an aqueous solution of NP-40 (Sigma) to a final concentration of 0.01% and supplemented with 1 mM concentrations of any of the following reagents: stearic acid (Cayman Chemicals), oleic acid (Cayman Chemicals), linoleic acid (Cayman Chemicals), α-linoleic acid (Cayman Chemicals), γ-linoleic acid (Cayman Chemicals), stearidonic acid (Cayman Chemicals), dihomo-γ-linoleic acid (Cayman Chemicals), eicosatetraenoic acid (Cayman Chemicals), ω-3-arachidonic acid (Cayman Chemicals), arachidonic acid (Cayman Chemicals), eicosapentaenoic acid (Cayman Chemicals), C15iso (Cayman Chemicals), C17iso (Cayman Chemicals), and C13iso (Chem Cruz). Dishes without lipids were also prepared. A synchronized population of 500 L1 animals was added to the wells and incubated for 36 h. Then the animals were challenged with Orsay virus for 3 days and collected for RNA extraction and qRT-PCR. Three independent experiments in triplicate were performed.
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