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Ppsq 31a automatic protein sequencer

Manufactured by Shimadzu
Sourced in Japan

The PPSQ-31A is an automatic protein sequencer manufactured by Shimadzu. It is designed to determine the amino acid sequence of proteins through automated Edman degradation. The PPSQ-31A performs the necessary chemical reactions and analysis to identify the amino acids in a protein sample, providing data on the sequential order of the amino acids.

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2 protocols using ppsq 31a automatic protein sequencer

1

N-terminal Amino Acid Sequencing

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Determination of N-terminal amino acid sequence by Edman degradation was performed using PPSQ-31A automatic protein sequencer (Shimadzu). Before sequencing the proteins were separated on a SDS-PAGE gel, electrotransferred on a Immobilon PSQ PVDF membrane (Millipore) and stained with Coomassie Brilliant Blue.
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2

Enzymatic Cleavage and Protein Sequencing

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A total of 10 μg of S1/S2 CleavEx protein was incubated with 500 nM KLK13 at 37°C for 5 hours. The reaction was stopped by the addition of 50 mM DTT-supplemented SDS sample buffer (1:1), and samples were immediately boiled for 5 min. The samples were then resolved on 10% SDS-PAGE gel together dual-color Page Ruler Prestained Protein size markers (Thermo Fisher Scientific, Poland) in the Tris-Tricine SDS-PAGE system. The separated proteins were then electrotransferred onto a Western S PVDF membrane with the Trans-Blot SD Semi-Dry Transfer Cell (Bio-Rad, Poland). The transfer was performed for 30 min at 15 V in transfer buffer [10 mM N-cyclohexyl-3-aminopropanesulfonic acid and 10% methanol (pH 11)]. The membranes were then stained with 0.025% (w/v) Coomassie Brilliant Blue R-250 (BioShop, Poland), and proteins in the bands of interest were sequenced by Edman degradation with a PPSQ-31A automatic protein sequencer (Shimadzu, Japan).
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