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29 protocols using isotype control

1

Depletion and Modulation of Immune Cells

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For KC depletion, mice were intraperitoneally (IP) injected with a single dose of 500 ng of DT (Sigma) or PBS for control mice. For TNF and IL-1 blocking experiments, 20 mg/kg of Anti-TNF-blocking antibody (Bio X Cell), 100 mg/kg of Anakinra or 20 mg/kg of isotype control (Bio X Cell) were given to mice intraperitoneal concomitant to DT injection. For EdU (Thermo Fisher) experiment, mice were IP injected with 1mg/mouse of EdU 4 h before sacrifice. For DDL1/4 blocking experiments, 1 mg of of DLL1 (BioXcell) and 1 mg of DLL4 (BioXCell) or 2 mg of polyclonal Armenian hamster IgG isotype (BioXCell) were injected 24 h before DT injection. For CSF1R blocking experiments, 100 mg/kg of PLX3397 was given by gavage 24 h and 48 h after DT injection.
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2

Zika Virus Antibody Neutralization Assay

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Three IVIG products were utilized in this study, ZIKV-IG, Control-Ig, and Gamunex®. ZIKV-IG and Control-Ig were provided by Emergent BioSolutions at a concentration of 93 mg/mL and 53 mg/mL of purified IgG, respectively. ZIKV-IG was purified IgG derived from human plasma collected at US FDA licensed plasma centers and were identified as Zika virus antibody positive by antibody neutralization assay as described previously for DENV and ZIKV (52 (link), 59 (link), 60 (link)). The Control-Ig was generated at Emergent BioSolutions using the same process as the ZIKV-IG product. Gamunex®, an FDA approved product used as a treatment for primary humoral immunodeficiency, was at a concentration of 100 mg/mL. Two monoclonal antibodies products were used, 4G2 mAb a pan flavivirus-reactive antibody, and an IgG2a mAb Isotype Control (BioXCell®).
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3

Sepsis Induction and Treatment in Mice

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Sepsis was induced by CLP58 (link) and compared to sham-operated controls. Briefly, mice were anesthetized with chloral hydrate (400 mg/kg body weight) and, through a midline celiotomy, the cecum was ligated distal to the ileocecal valve and punctured with an 18-gauge needle to allow feces to enter the peritoneal cavity. A control group was sham-operated. The mice were intravenously administered with either saline or other agents, including A438079 (80 mg/kg, P2RX7 antagonist, Tocris Bioscience, Bristol, UK), anti-IL-1β mAb (100 μg/mouse, AB-401-NA, R&D Systems, Minneapolis, MN, USA) or anti-CXCL1 mAb (50 μg/mouse, AB-401-NA, R&D Systems), anti-CX3CL1 mAb (15 μg/mouse, AB-401-NA, R&D Systems), anti-CCL2/JE/MCP-1 mAb (10 mg/kg, AF-479-NA, R&D Systems) and anti-CXCL7/Thymus Chemokine-1 mAb (50 mg/kg, AF793, R&D Systems), at 1 h after CLP surgery. Normal Goat IgG (R&D Systems), Rat IgG2A isotype control (R&D Systems) were used as isotype control and administered using the same dosing schedule. For neutrophil depletion, mice were treated with intraperitoneal injection of 250 μg anti-granulocyte receptor-1 (Gr-1) mAb RB6-8C5 (BioXCell, West Lebanon, NH, USA) or an isotype control (BioXCell) 24 h prior to CLP surgery. Assessments were made by two independent observers who were blind to genotype and treatment status.
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4

Anti-ICOS-Ligand Blocking Attenuates Allergic Airway Inflammation

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Mice were administered 25 μg HDM extract (Dermatophagoides pteronyssinus) or 10 μg Alternaria alternata (ALT) intranasally (i.n.) three times a week for up to 5 weeks (Greer Laboratories, NC, USA; Citeq, Groningen, The Netherlands). Control mice were given 25 μL PBS. In blocking experiments, from week 4 onwards, mice were co‐administered 150 μg anti‐ICOS‐Ligand (Clone: HK5.3, BioXCell, NH, USA) or isotype control (Clone: 2A3, BioXCell, NH, USA) antibody in 200 μL PBS via intraperitoneal (i.p.) injection three times a week for 2 weeks. Mice were culled at the end of week 5. All animals were harvested 18 hours after the final allergen dose.
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5

Anti-CD8 Antibody Depletion Protocol

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Anti-mouse CD8 depleting antibody (clone 53–6.7) and isotype control were purchased from BioXcell. As described previously (Serrels et al., 2015 (link)), mice were treated with 150 μg of antibody administered by intraperitoneal injection for three consecutive days, followed by a rest period of 3 days. Following this, SCC or Met01 cells were injected subcutaneously into both flanks and T-cell depletion maintained by further administration of 150 μg depleting antibody at 3 day intervals for the remainder of the experiment. Tumor growth was measured twice-weekly as described above.
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6

IFNAR1 Blocking Antibody in Infection

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The IFN receptor (IFNAR1) blocking mAb MAR1-5A3 or isotype control (Bio X Cell) was administered by a single intraperitoneal injection of 2.5 mg mAb the day before infection with B. burgdorferi or the administration of K/B×N serum, Figs 2, 9 (20 (link), 37 (link)).
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7

Anti-IFN-γ Treatment for S. aureus Infection

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S. aureus (1 × 107 CFUs per head)–infected mice were administered αIFN-γ (R4-6A2, 45.45 mg/kg) or isotype control purchased from Bio X Cell (Lebanon, NH, USA) by intraperitoneal injection once at 1 hour after S. aureus infection. Mice were euthanized 24 hours after S. aureus infection.
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8

Neutrophil Depletion in Mice

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Mice received either 250 μg anti-Ly6g clone 1A8 or isotype control (BioXCell, West Lebanon, NH) via intraperitoneal injection every other day beginning between days 3-15 p.i. Targeted depletion of neutrophils was confirmed by flow staining of circulating neutrophils at defined times post-treated with Ly6g-specific antibody.
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9

Immune Depletion and Hyperoxia Protocol

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For depletion of subsets of T and NK cells, immune cells were depleted (by intraperitoneal injection of 500 μg of either GK1.5, YTS 169, PK-136, or isotype control, Bio X Cell) 2 days before tumor inoculation and 60% oxygen treatment, preventing attack by T or NK cells on tumor cells. To maintain immune cell depletion, mAbs (250 μg) were given intraperitoneally each week until assay completion (21 days). Rat immunoglobulin G (IgG) isotype controls were given to control mice at the same dose. For CTLA-4/PD-1 dual blockade, mAbs against CTLA-4 (9H10, Bio X Cell) and PD-1 (J43, Bio X Cell) were injected (500 μg) intraperitoneally into tumor-bearing mice on days 3, 6, and 9. Mice were treated with respiratory hyperoxia from days 3 to 21 or maintained at 21% O2 until assay completion at day 21.
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10

Aerosol Infection of Tuberculosis Strains

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Wild type M. tuberculosis strain H37Rv was used for all studies unless indicated. This strain was confirmed to be PDIM-positive. Prior to infection bacteria were cultured in 7H9 medium containing 10% oleic albumin dextrose catalase growth supplement (OADC) enrichment (Becton Dickinson) and 0.05% Tween-80. H37Rv expressing sfYFP has been previously described and the episomal plasmid was maintained with selection in Hygromycin B (50ug/ml) added to the media (10 (link)). For low and high dose aerosol infections, bacteria were resuspended in phosphate-buffered saline containing Tween-80 (PBS-T). Prior to infection, bacteria were sonicated then delivered via the respiratory route using an aerosol generation device (Glas-Col). Infections of mice with the streptomycin dependent strain of Mtb (18b) have been previously described (36 (link)). In short, mice were infected via intra-tracheal infection and treated daily with 2mg of streptomycin daily for two weeks. For anti-IL1R treatment mice were injected with 200ug of anti-IL1R antibody or Isotype control (Bio-xcell) every other day starting at day 14. Both male and female mice were used throughout the study and no significant differences in phenotypes were observed between sexes.
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