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Guanidine hydrochloride

Manufactured by Merck Group
Sourced in United States, Germany, China, Cameroon, Switzerland, India

Guanidine hydrochloride is a chaotropic agent widely used in molecular biology and biochemistry laboratories. It is a crystalline, water-soluble compound that effectively denatures proteins and disrupts hydrogen bonding, making it useful for applications such as DNA extraction, protein purification, and denaturing gel electrophoresis.

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194 protocols using guanidine hydrochloride

1

Guanidine Hydrochloride Inhibits FMDV Replication

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Guanidine hydrochloride (Sigma) treated ZZ-R 127 cells grown in 24-well plates were infected with AvrII-O1K/OUKG-HS+ parental virus or Nano-FMDV-HS+ at a MOI of 2 by incubation for 1 h at 37° C. Following infection, cells were washed with PBS and MES buffer to remove residual free viral particles and background luciferase, then incubated at 37° C for different periods of time in fresh medium supplemented with 1% FCS and Guanidine hydrochloride at a final concentration of 0, 0.004, 0.04, 0.4 or 4 mM. At 7 and 24 hpi, supernatant samples were analysed by luciferase assay and real-time RT-PCR to measure viral yields. Experiments were performed in triplicate.
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2

Recombinant Protein Expression and Purification

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Taq polymerase enzyme and PCR reagents were purchased from Takara (Kyoto, Japan). Competent E. coli strain BL21 (DE3) and plasmid vector pET21b (+) were purchased from Novagen (Birmingham, UK). Restriction enzymes and T4 DNA ligase enzyme were purchased from NEB (New England Biolabs, Ipswich, MA, USA). HisPurTM Ni-NTA was purchased from Thermo Scientific (Meridian Rd, Rockford, IL, USA) and QIAGEN Plasmid Midi Kit was purchased from Qiagen (Qiagen GmbH, Hilden, Germany). Luria-Bertani broth, sodium chloride, urea, guanidine hydrochloride, L-arginine, and other chemicals were brought from Sigma Aldrich (St. Louis, MO, USA).
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3

Enzymatic Hydrolysis of Bovine Serum Albumin

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Bovine serum albumin (≥98%, Catalog No. V900933), pepsin (porcine gastric mucosa, Catalog No. P6887), aspergillopepsin (Protease from Aspergillus saitoi, Catalog No. P2143), and guanidine hydrochloride (≥99%, Catalog No. G3272) were purchased from Sigma-Aldrich (St. Louis, MO, USA). Deuterium oxide (99.9%, Catalog No. R002863) was obtained from RHAWN (Shanghai, China). Formic acid was provided by Fluka (Seelze, Germany). All the reagents were dispersed in ultrapure water (Milli-Q, Millipore Corporation, Bedford, MA, USA).
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4

Analytical Quantification of Metabolites

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All reagents and chemicals were of analytical grade and applied without further purification. HPLC-grade deionized water was used during all experiments.
α-KG, 5-HMF, NASeLM, NALM, and glucose were supplied by CYL-Pharma (Lassnitzhöhe, Austria). NaCl, KCl, KH2PO4, MgSO4, CaCl2, NaHCO3, and dextrose were obtained from Roth (Karlsruhe, Germany). Acetonitrile, ammonium acetate, 1-butanol, ethanol, HPLC-grade water, hydrogen peroxide, and HCl were obtained from Merck (Darmstadt, Germany). Albumin from human serum, angiotensin 1-7 acetate salt hydrate, butylated hydroxytoluene (BHT), 2,4-dinitrophenylhydrazine (DNPH), ethyl acetate, guanidine-hydrochloride, malondialdehyde tetra-butyl-ammonium salt (MDA), 2-thiobarbituric acid (TBA), trichloroacetic acid (TCA), and tris(hydroxymethyl)aminomethane (Tris) were obtained from Sigma-Aldrich (Vienna, Austria).
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5

HSA Binding and FRET Determination

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PA was purchased from Ultra Scientific (Philadelphia, PA 19122, USA), while fatty acid-free albumin from human serum was from Sigma-Aldrich (St. Louis, MO 63103, USA). EGCg (>95%) was obtained from Lipton Tea Co (Secacus, NJ 07094, USA). Reagent grade sodium phosphate was used to prepare 20 mM, pH 7.0 buffer used in all experiments, and guanidine hydrochloride was purchased from Sigma-Aldrich. HSA was labeled with one of two fluorescent probes, 6-propionyl-2-(dimethylamino) naphthalene (prodan) or 7-(diethyl amino)-4-methylcoumarin 3-maleimide (CPM), for FRET distance determination. Prodan was purchased from Life Technologies (Waltham, MA 02451, USA), while CPM was obtained from Chemodex (Buckingham, Bucks MK18 1EG, UK).
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6

Cysteine Content Analysis of re-AuFaeA

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Guanidine hydrochloride (5.5 M, Sigma) was added for 15 min to denature the purified re-AuFaeA or re-AuFaeAA126C-N152C (final concentration of 2 mg/mL) [34 ]. Thiol titration was performed by incubating thirty parts of denatured re-FAE with one part of 4 mg/mL dithionitrobenzoic acid in 0.25 M Tris-HCl buffer (pH 8.0) for 15 min at 25°C, and the absorbance was measured at 410 nm in a spectrophotometer [35 (link)]. The wild-type re-AuFaeA containing one free cysteine at position 235 was used as a control. The free cysteine content of each re-FAE was calculated from a cysteine concentration-OD410 standard formula, which was established by testing the OD410 of cysteine concentration at a range from 0 to 0.4 mM. The number of disulfide bridges in the re-FAEs was deduced from the different value of the number of total cysteines in protein primary structure and free ones in 3D structure at the tested concentration.
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7

Equine Skeletal Muscle Mb Crosslinking

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Holo-myoglobin from equine skeletal muscle (Mb), potassium phosphate monobasic and dibasic, Tris base, D-(+)-raffinose pentahydrate, guanidine hydrochloride (Gdn) and anhydrous dimethyl sulfoxide (DMSO) were purchased from Sigma Aldrich (St. Louis, MO). The heterobifunctional crosslinker succinimidyl 4,4’-azipentanoate (SDA) was obtained from Thermo Scientific (Rockford, IL). Trypsin was obtained from Promega (Madison, WI) and mass spectrometry-grade water, acetonitrile and formic acid from Fisher Scientific (Fair Lawn, NJ).
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8

Functionalized Nanoparticle Vaccine Synthesis

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Pluronic-stabilized poly(propylene sulfide) NPs were synthesized, functionalized and surface-conjugated as previously described26 (link)27 (link). For antigen conjugation, OVA and NPs were incubated overnight at room temperature in the presence of guanidine hydrochloride (Sigma-Aldrich)29 (link). For adjuvant conjugation, 5′ SPO3-modified CpG-B was incubated overnight in endotoxin free water (B Braun, Sempach, Switzerland) at room temperature25 (link). NP-OVA and NP-CpG were purified by size-exclusion chromatography using CL6B matrix (Sigma-Aldrich), eluted and stored in PBS at room temperature. Protein concentration on NPs was determined by Pierce BCA protein assay (Thermo Scientific, Rockford, IL, USA) and CpG concentration on NPs was determined by GelRed (Brunschwig, Basel, Switzerland) assay. NP size before and after conjugation was determined by dynamic light scattering (Zetasizer, Nano ZS, Malvern, UK) to be of 30 ± 4 nm. All NPs formulations displayed endotoxin levels below 0.1 EU per administered dose, as detected with HEK-Blue hTLR4 cells from Invivogen (San Diego, CA, USA).
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9

Comprehensive Analytical Standards Protocol

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L-amino acid standards, norvaline, sarcosine, sodium dihydrogen phosphate (NaH2PO4), hydrochloric acid, sodium hydroxide, guanidine hydrochloride, 2,4-dinitrophenylhydrazine, iron (II) chloride, iron (III) chloride, ammonium thiocyanate, ortho-phthalaldehyde, 9-fluorenylmethoxycarbonyl chloride, iodoacetic acid, 3-mercaptopropionic acid, boric acid (H3BO3), trichloroacetic acid, and MS-grade ammonium acetate were from Sigma-Aldrich (Darmstadt, Germany). Standards for fatty acid analysis included Supelco 37 Component FAME mix (Supelco, St. Louis, MO, USA), 68D (Nu-Check-Prep, Elysian, MN, USA), and GLC-490 (Nu-Check-Prep, Elysian, MN, USA). Standards for the lipid class analysis were oleic acid, oleoyl monoacylglycerol, dioleoyl diacylglycerol, triolein, dioleoyl phosphatidylcholine, cholesteryl oleate and ethyl docosahexaenoic acid (Larodan, Solna, Sweden). All solvents used were at least HPLC grade. Water used was ultra-pure water (ELGA LabWater, High Wycombe, UK).
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10

Synthesis and Characterization of Microcrystalline Cellulose Derivatives

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Microcrystalline cellulose (MC) powder, N,N-dimethylformamide (DMF) (99.8%, anhydrous), thionyl chloride (SOCl2) (reagent grade, 97%), ammonium hydroxide (reagent grade, 28.0–30.0% NH3 basis), sodium hydroxide (NaOH) (ACS reagent, ≥97% pellets), guanidine hydrochloride (≥99.0%), ethanol (ACS reagent, ≤ 0.003% water), polyvinyl alcohol (PVA) (98–99% hydrolyzed, Mw = 146,000–186,000), glutaraldehyde (Grade I, 70% in H2O), thiazolyl blue tetrazolium bromide (MTT salt) (≥97.5%), and sodium dodecyl sulfate (SDS) (for molecular biology, ≥ 98.5%) were all purchased from Sigma-Aldrich (St. Louis, MO). Phosphate buffered saline (PBS) (pH = 7.2) was purchased from Life Technologies (Grand Island, NY). Hydrochloric acid (HCl) (12.1 M) was purchased from VWR (Radnor, PA). A chlorine standard (100 ppm, Cl (C-9A)), iodide reagent (I-55), and acid reagent (A-13) were all purchased from North Central Laboratories (Birnamwood, WI). Sodium hypochlorite (Azone 15) was from Hawkins, Inc (St. Louis, MO). All aqueous solutions were prepared using purified water with a resistivity of ≥18 MΩ cm from a Nanopure filtration system (Fisher Scientific, Pittsburgh, PA).
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