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Dibutyryl cyclic amp

Manufactured by Merck Group
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Dibutyryl-cyclic AMP is a synthetic compound that acts as an analog of the second messenger cyclic AMP (cAMP). It is commonly used in laboratory settings as a research tool to study the role of cAMP in various cellular processes.

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45 protocols using dibutyryl cyclic amp

1

Directed Differentiation of Pluripotent Stem Cells to Neurons

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Colonies were transferred to ultra-low attachment plates (Corning) to generate embryoid bodies (EB)17 (link). EBs were treated with neural induction medium [NIM: DMEM/F12/glutamax/N2/B27 (Invitrogen) and pen/strep)] for 1 week. Cells were transferred to polyornithine/laminin (Invitrogen)-coated plates. After 7 d, neural rosettes were dissected from the EBs and expanded in NIM containing 20 ng/ml FGF2 (Preprotech). Rosettes were dispersed to form NPCs and passaged every 5–7 d. To obtain mature neurons, NPCs were treated with NIM with 20 ng/ml BDNF (Preprotech), 20 ng/ml GDNF (Peprotech), 1 mm dibutyryl-cyclic AMP (Sigma–Aldrich) and 200 nm ascorbic acid (Sigma–Aldrich), and cultured with weekly half media changes. Neurons used in experiments were differentiated for 6–8 wk. At least two clones were independently grown for each line. In studies that required multiple wells of the same line (e.g. PCR, temperature cycles) it was not always possible to grow sufficient numbers of cells for experiments and in cases, some lines were not included. A detailed accounting of cells allocated for each experiment is provided (Table S2S3).
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2

Differentiation of LUHMES Cells

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LUHMES cells58 (link) were cultured on 0.1 mg/mL poly-l-lysine (Sigma-Aldrich, St. Louis, MO, USA) coated flasks (Nunclon DELTA surface, NUNC A/S, Roskilde, Denmark) in growth medium consisting of DMEM/F12 (Sigma-Aldrich) with 1% N2 supplement (Life Technologies, Carlsbad, CA, USA), and 0.04 µg/mL basic fibroblast growth factor (PeproTech, Rocky Hill, CT, USA). For experiments, cells were plated on multi-well plates, in differentiation medium consistent of DMEM/F12 with 1% N2 supplement, 1 µg/mL tetracycline, 0.49 µg/mL dibutyryl cyclic AMP (Sigma-Aldrich), and 2 ng/mL glial cell-derived neurotrophic factor (GDNF; R&D Systems, Minneapolis, MN, USA). Before plating, the multi-well plates were coated with 0.1 mg/mL poly-l-lysine (Sigma-Aldrich) at 4 °C overnight, washed three times with phosphate-buffered saline (PBS; Life Technologies) followed by coating with 5 µg/mL bovine fibronectin (Sigma-Aldrich) at 37 °C and 5% CO2 overnight, followed by once washing with PBS (Life Technologies), and air-drying. LUHMES cells were cultured at 37 °C, 5% CO2, and water-saturated air.
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3

Differentiation of hiPSC-NPCs into Cortical Neurons

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Differentiation of hiPSC–NPCs into cortical neurons (hiPSC–neuron) was performed as previously described [21 (link)], with a few modifications. Briefly, NPCs were cultivated in pre-coated Laminin/Poly-L-Ornithine plates in Neurobasal Medium 50/50 supplemented with 20 ng/ml BDNF (PeproTech), 20 ng/ml GDNF (PeproTech), 1 mM dibutyryl-cyclic AMP (Sigma), 200 nM ascorbic acid (Sigma), 10 ng/mL IGF-1 (PeproTech), and 10 ng/ml WNT-3A (R&D). hiPSC–neurons were stained for βIII tubulin, MAP2, and NeuN after 3 weeks of differentiation. Images obtained by Leica TCS SP8 Confocal System were analyzed using ImageJ (NIH). Total nuclei in processed images were counted using CellProfiler IdentifyPrimaryObjects function [22 (link)], and the percent of nuclei positive for the target of interest (NeuN, MAP2, and βIII tubulin) was counted using ImageJ. See Supplementary Methods for immunocytochemistry details.
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4

Neural Stem Cell Differentiation Protocol

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Neural stem cells (NSCs) were generated and differentiated into neural cultures as described previously72 (link). For patterning, NSCs were plated on polyornithin-/laminin-coated culture flasks at 1E4 cells/cm² in DMEM/F-12 with GlutaMax (#31331093) and neurobasal medium (#21103049) supplemented with 1X B27 (ThermoFisher #12587010), 1X N2 (ThermoFisher #17502048), 50 µM 2-mercaptoethanol (ThermoFisher #31350010) and 100 ng/ml FGF-8 (Peprotech), 200 ng/ml sonic hedgehog (Peprotech), and 100 μM ascorbic acid 2-phosphate (Sigma) and cultured for one week. For differentiation, the resultant progenitors were plated at 5E4 cells/cm² in basal medium supplemented with 20 ng/ml BDNF, 10 ng/ml glial cell-derived neurotrophic factor (GDNF; Peprotech), 500 μM dibutyryl cyclic AMP (Sigma), and 100 μM ascorbic acid 2-phosphate.
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5

In vitro Maturation of Mouse Eggs

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Immature GV (germinal vesicle) eggs were collected from the ovaries of wild-type B6D2F1 or Juno KO female mice (9–16 weeks old), 46 h after the injection of pregnant mare serum gonadotropin or anti-inhibin antibody (CARD HyperOva, Kyudo). Antral follicles, suspended in FHM medium supplemented with 250 μM dibutyryl-cyclic AMP, were punctured with 26G needles (Sigma). After dissociation of the cumulus cells by a glass pipette, the eggs were transferred to the medium supplemented with 5 μg ml−1 cytochalasin B (Sigma), and mRNAs (50 ng ml−1) were then injected into the eggs, using a piezo-micromanipulator with a glass capillary needle. The eggs were washed three times, and were cultured in TYH medium containing 10% fetal bovine serum (Biowest) for in vitro maturation. After 14 h, the zona were removed from the MII eggs, using a micromanipulator27 (link). Pre-loading of Hoechst 33342 into the denuded eggs was performed, as previously described2 (link), and after three washes with fresh TYH medium, the eggs were subjected to mJUNO immunostaining or sperm–egg fusion assays. In one experiment, considering a failure of superovulation, 2 to 4 Juno KO female mice were assigned to an experimental group and 2 WT mice were assigned to a control group.
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6

Calcium Signaling Pathway Compounds

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Nicotine was purchased from Nacalai Tesque (Kyoto, Japan). Thapsigargin and ionomycin were purchased from FUJIFILM Wako Pure Chemical Industries, Ltd. Fluo-4-AM and PowerLoad concentrate were purchased from Molecular Probe (Eugene, OR, USA). Acetylcholine, d-tubocurarine, nifedipine and dibutyryl cyclic AMP were purchased from Sigma-Aldrich (St. Louis, MO, USA). Omega-conotoxin GVIA and α-conotoxin AuIB were from the Peptide Institute, Inc. (Osaka, Japan). Atropine was obtained from Katayma Chemical Industries Co., Ltd. (Osaka, Japan). All the other chemicals used were of analytical grade.
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7

Directed Neuronal Differentiation from Human NPCs

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On day −1 NPCs were dissociated with Accutase Cell Detachment Solution (Innovative Cell Technologies, # AT-104) for 5min at 37°C, counted and seeded at a density of at 5×105 cells/well on Matrigel coated 24-well plates in hNPC media (DMEM/F12 (Life Technologies #10565), 1x N-2 (Life Technologies #17502–048), 1x B-27-RA (Life Technologies #12587–010), 20 ng/mL FGF2 (Life Technologies)) on Matrigel (Corning, #354230). On day 0, cells were transduced with rtTA (Addgene 20342) and NGN2 (Addgene 99378) lentiviruses as well as desired shRNA viruses in NPC media containing 10 μM Thiazovivin (Millipore, #S1459) and spinfected (centrifuged for 1 hour at 1000g). On day 1, media was replaced and dox was added with 1ug/mL working concentration. On day 2, transduced hNPCs were treated with corresponding antibiotics to the lentiviruses (1 μg/mL puromycin for shRNA, 1 mg/mL G-418 for NGN2-Neo). On day 4, medium was switched to Brainphys neuron medium (Brainphys (STEMCELL, # 05790), 1% N-2, 2% B-27-RA, 1 μg/mL Natural Mouse Laminin (Thermofisher, # 23017015), 10 ng/mL BDNF (R&D, #248), 10 ng/mL GDNF (R&D, #212), 500 μg/mL Dibutyryl cyclic-AMP (Sigma, #D0627), 200 nM L-ascorbic acid (Sigma, # A4403) and 1 μg/mL dox. Medium was replaced every second day until SARS-CoV-2 infection on day 7.
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8

Retinoic Acid and cAMP Treatment Protocol

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Lymphoblastoid lines were treated with retinoic acid (1 × 10−7 M) and dibutyryl-cyclic AMP (1 mM) (Sigma, St Louis, MO) for 24 h before RNA extraction, and retrotranscribed with SuperScript® III Reverse Transcriptase (Invitrogen Life Technologies, Grand Island, NY). PCR was performed with GoTaq® Green Master Mix (Promega Corporation, Madison, WI).
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9

Adherence and Culture of Retinoblastoma Cell Lines

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Prior to survival assay and RT-PCR, human retinoblastoma cell lines Y79 (# HTB-18, ATCC, Manassas, VA) and WERI Rb-1 (# HTB-169, ATCC) were maintained in flasks with DMEM Glutamax medium (#21885, Invitrogen) containing 1000 U/ml penicilin and streptavidin (#15140-122, Invitrogen) and 10% fetal calf serum (#16000-044, Invitrogen) at 37°C, 85% humidity and 5% CO2. For immunocytochemistry, Y79 and WERI-Rb-1 cells were cultured on BD Falcon 8 wells glass chambers slides (#354108, Becton-Dickinson, Franklin Lakes, NJ) previously coated with 25 µg/ml of laminin-1 (L2020, Sigma, St. Louis, MO). Cells were seeded at 60.000 cells/cm2 and cultured for a week in DMEM Glutamax medium (#21885, Invitrogen) supplemented with 250 µM dibutyryl cyclic AMP (Sigma) 1000 U/ml penicilin and streptavidin (#15140-122, Invitrogen) and 10% Lipumin (#F11-014, PAA Laboratories, Pasching). As described previously [23] (link), [24] , those conditions allowed the adherence of the retinoblastoma cell lines on the glass surface, therefore easing the immunocytochemistry staining process and analysis.
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10

Murine Mesodermal Endothelial Progenitor Cell Differentiation

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The murine mesodermal endothelial progenitor cell line T17b was cultured and differentiated according to established protocols [24 (link),30 (link)]. Briefly, T17b EPCs were seeded onto cell culture flasks coated with bovine skin gelatin type B (Sigma-Aldrich, Schnelldorf, Germany). For cell cultivation, high glucose DMEM GlutaMAX® (Gibco/Life Technologies, Carlsbad, CA, USA) was used containing 20% fetal calf serum (Biochrom), 100 U/mL penicillin (Biochrom), 100 µg/mL streptomycin (Biochrom), 1 mM nonessential amino acids (Gibco), 2 mM HEPES buffer pH 7.5 (Gibco) and 0.1 mM 2-mercaptoethanol (Gibco). By supplementing 0.5 mM dibutyryl cyclic AMP and 1 µM all-trans retinoic acid (Sigma-Aldrich), endothelial differentiation was induced.
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