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8 protocols using ribavirin

1

Characterization of Uric Acid Transporters

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The following compounds were purchased commercially from the sources indicated: allopurinol, benzbromarone, cyclosporine, D-fructose, elacridar, furosemide, hydrochlorothiazide, nicotinic acid, oxypurinol, rosuvastatin calcium salt, salicylic acid, 4-hydroxy chalcone (Wako Fine Chemical, Osaka, Japan); atorvastatin, chlorothiazide, febuxostat, mizoribine, pyrazinecarboxylic acid, ribavirin, tacrolimus, xylitol (Tokyo Chemical Industry, Tokyo, Japan); ethambutol, losartan (LKT Laboratories, St Paul, MN, USA); fenofibrate, probenecid, sulfasalazine, Ko143, ATP, AMP, creatine phosphate disodium salt tetrahydrate, creatine phosphokinase type I from rabbit muscle (Sigma-Aldrich, St. Louis, MO, USA); pyrazinamide (ACROS ORGANICS, Geel, Belgium); theophylline (Nacalai Tesque, Kyoto, Japan); and topiroxostat (MedChem Express, Princeton, NJ, USA). The [8-14C]-uric acid (53 mCi/mmol) was from American Radiolabeled Chemicals (St. Louis, MO, USA). All other chemicals used were commercially available and of analytical grade.
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2

Evaluating Antiviral Compounds against SARS-CoV-2

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Recombinant human TNF-α (Cat. # 554618) was purchased from BD. Biosciences. Ribavirin (RIB, Cat. # R0077) was purchased from Tokyo Chemical Industry (TCI). Mycophenolic acid (MPA, Cat. # M3546), BAY 11-7082 (Cat. #B5556-10MG), and bortezomib (Cat. # 5043140001) were purchased from Sigma-Aldrich. Remdesivir was purchased from AOBIOUS.
Anti-V5 (Cat. # R960-25), HRP-conjugated anti-V5, and goat HRP-conjugated anti-mouse IgG (H+L) secondary antibody (Cat. # 31430) were purchased from Thermo Fisher Scientific. Anti-GAPDH antibody (Cat. # sc-32233) was purchased from Santa Cruz Biotechnology. Anti-NF-κB p65 (Cat. #8242), anti NF-κB p65 ser536 phosphorylation (Cat. #3033), anti-FLAG (Cat. # 2368), anti-H3 (Cat. # 9715S), and goat HRP-conjugated anti-rabbit IgG (Cat. # 7074) antibodies were purchased from Cell Signaling Technology. Anti-IL8 antibody (Cat. # 554717) was purchased from BD. Biosciences. The anti-IMPDH2 antibody (Cat. # 12948-1-AP) was purchased from Proteintech Group. The anti-SARS-CoV-1/2 NP 1C7C7 antibody was purchased from Sigma-Aldrich.
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3

Molecular Mechanisms of ICAM-1 and LDLR Regulation

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Ribavirin (>98% purity) and MTT were purchased from Tokyo Chemical Industry (Tokyo, Japan) and Sigma-Aldrich (St. Louis, MO), respectively. Anitbiotic-antimycotic and minimum essential medium (MEM) were purchased from Invitrogen (Grand Island, NY). Fetal bovine serum (FBS) was supplied by PAA Laboratories (Etobicoke, Ontario, Canada). The protein molecular weight standards (Precision Plus Protein all blue standards) were purchased from Bio-Rad Life Sciences (Hercules, CA). RIPA buffer and 1% mammalian cell protease inhibitor cocktail were purchased from Sigma-Aldrich. The primary antibodies used in this study were as follows: anti-ICAM-1 antibody [rabbit polyclonal to intercellular adhesion molecule-1 (ICAM-1)], anti-low-density lipoprotein receptor (LDLR) antibody (rabbit polyclonal to LDLR), and anti-actin antibody (rabbit polyclonal to actin) purchased from Abcam (Cambridge, UK). The secondary antibody (horseradish peroxidase conjugated goat polyclonal to rabbit) was supplied by Abcam. All of the other chemicals and reagents used in this study were of analytical grade quality and available commercially.
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4

In Vitro Evaluation of Antiviral Compounds

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Human hepatoma cells (Huh-7, RCB1366), baby hamster kidney fibroblast cells (BHK-21, RCB1423), and African green monkey kidney cells (Vero, RCB0001) were provided by the RIKEN BioResource Research Center (https://web.brc.riken.jp/ja/ (accessed on 10 December 2023)). Huh7 and Vero cells were cultured in DMEM (Wako, Tokyo, Japan), supplemented with 10% fetal bovine serum (FBS). BHK-21 cells were cultured in E-MEM (Wako) with 10% FBS. Ribavirin and (2′R)-2′-deoxy-2′-fluoro-2′-methyluridine (FMeU) were purchased from Tokyo Chemical Industry (Tokyo, Japan), and sofosbuvir (SOF) was obtained from ChemScene LLC (Monmouth Junction, NJ, USA)
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5

Renal Cell Carcinoma Cell Lines and Treatments

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The study was approved by the Ethics Committee of Harbin Medical University (13016). This study used human RCC cell lines 786–0 cells, which were donated by Dr. Shen of the Department of Urology at The first affiliated hospital of Jilin University. Mice renal carcinoma cell lines Renca and HEK-293 cells purchased from American Type Culture Collection. Culture medium for Renca consisted of complete growth medium RPMI-1640 (Hyclone, Irvine, CA, USA) supplemented with heat-inactivated (56°C, 30 min) 10% fetal bovine serum (FBS, Gibco), 100 U/ml penicillin and 100 μg/ml streptomycin (Gibco). 786–0 cells were grown in Dulbecco’s modified Eagle’s medium (DMEM, Hyclone) containing 10% FBS (Hyclone) and 100 U/ml penicillin and 100 μg/ml streptomycin (Gibco). Above cells were cultured in an atmosphere of 5% CO2 in air at 37°C.
Ribavirin and interferon α. Ribavirin and recombinant mouse and human Interferon α (IFN-α) were purchased Tokyo Chemical Industry (TCI) and eBioscience, respectively.
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6

Recombinant Protein Detection Assay

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Recombinant human TNF-α (Cat. # 554618) was purchased from BD. Biosciences. Ribavirin (RIB, Cat. # R0077) was purchased from Tokyo Chemical Industry (TCI). Mycophenolic acid (MPA, Cat. # M3546) was purchased from Sigma-Aldrich. Anti-V5 (Cat. # R960–25), HRP-conjugated anti-V5, and goat HRP-conjugated anti-mouse IgG (H+L) secondary antibody (Cat. # 31430) were purchased from Thermo Fisher Scientific. Anti-GAPDH antibody (Cat. # sc-32233) was purchased from Santa Cruz Biotechnology. Anti-FLAG (Cat. # 2368) antibody, anti-H3 antibody (Cat. # 9715S), and goat HRP-conjugated anti-rabbit IgG antibody (Cat. # 7074) were purchased from Cell Signaling Technology. Anti-IL8 antibody (Cat. # 554717) was purchased from BD. Biosciences.
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7

Evaluation of Bioactive Compounds and Enzymes

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Ascorbic acid, (3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyl tetrazolium bromide) (MTT), DPPH, gallic acid, quercetin, and sulforhodamine B (SRB) were purchased from Sigma-Aldrich (St. Louis, MO). 5,5-Dithiobis(2-nitrobenzoic acid) (DTNB), Folin-Ciocalteu’s phenol reagent, and acetylthiocholine iodide (ATChI) were purchased from Sigma-Aldrich. Commercially available antibiotic ciprofloxacin, anticancer agent cisplatin, and AChE inhibitors donepezil hydrochloride, huperzine A and tacrine were supplied by Sigma-Aldrich. Ribavirin was purchased from Tokyo Chemical Industry (Tokyo, Japan). Anitbiotic-antimycotic was purchased from Invitrogen (Grand Island, NY). Recombinant human BACE-1 and fluorogenic peptide substrate (FPS) Mca-SEVNLDAEFRK (Dnp) RR-NH2 were purchased from R&D system (Minneapolis, MN). Brain Heart Infusion (BHI) broth and Eggerth-Gagnon (EG) agar were purchased from Becton, Dickinson and Company (Sparks, MD) and Eiken Chemical (Tokyo, Japan), respectively. Minimum essential medium (MEM), RPMI 1640 medium, and fetal bovine serum (FBS) were supplied by Life Technologies (Grand Island, NY). All of the other chemicals and reagents used in this study were of reagent-grade quality and available commercially.
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8

Antiviral Compound Procurement and Verification

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Favipiravir (PubChem CID: 492405), sofosbuvir (PubChem CID: 45375808), and Dasabuvir (PubChem CID: 56640146) were purchased from Chemscene LLC (Monmouth Junction, NJ, USA). Ribavirin (PubChem CID: 37542), valacyclovir hydrochloride (PubChem CID: 135398741), vidarabine monohydrate (PubChem CID: 32326), lamivudine (PubChem CID: 60825), and zidovudine (PubChem CID: 35370) were purchased from Tokyo Chemical Industry CO., Ltd. (Tokyo, Japan). Remdesivir (PubChem CID: 121304016) was purchased from LALPharm Co., Ltd. (Beijing, China). Quality control of remdesivir was guaranteed by the supplier based on HPLC-Mass spec and NMR analysis data, and we re-verified these findings before experimentation. All compounds were stored as 20-mM stock solutions in 100% dimethyl sulfoxide (DMSO) (Sigma-Aldrich, St. Louis, MO, USA).
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