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Nanofil needle

Manufactured by World Precision Instruments
Sourced in United States

The NanoFil needle is a specialized laboratory equipment designed for precise fluid delivery and sample collection. It features a fine-tipped needle that allows for the manipulation of small volumes with high accuracy and control. The NanoFil needle is suitable for a variety of applications that require precise liquid handling in research and laboratory settings.

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12 protocols using nanofil needle

1

Stereotaxic AAV Injections in DAT-cre Mice

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Stereotaxic injections were performed in heterozygous DAT-cre+ and wild-type (WT) mice of either sex at 8 to 11 weeks of age96 (link). An Adeno-Associated Virus (AAV) containing an inverted sequence of EGFP (AAV1 pCAG-FLEX-EGFP-WPRE, University of Pensylvania)22 (link) or mNeongreen (AAV1 pCAG-FLEX-mNeongreen-WPRE)97 (link) coding gene flanked by loxP-sites was injected into DAT-cre+ mice (Fig. 1 Panel 1). Saline injected littermates were used as autofluorescence controls. The stereotaxic injections were performed in Isoflurane-anesthetized mice using a 10 μl NanoFil syringe and a 35 G beveled NanoFil needle (World Precision Instruments). Injection coordinates for the Substantia Nigra pars compacta (SNc) were anterior/posterior (A/P)− 3.6 mm, lateral (L)± 1.3 mm, dorsal/ventral (D/V)− 4.2 mm. Injection coordinates for the Ventral Tegmental (VTA) were with a 12° angle A/P− 2.9 mm, L± 1.6 mm; D/V− 4.6 mm. A/P and L coordinates are given with respect to the bregma, whereas D/V coordinates are given with respect to the brain surface (Fig. 1 Panel 1). The animals were euthanized after 28–35 days at the maximal viral EGFP/mNeongreen expression. For each fluorescence-activated synaptosome sorting (FASS) experiment, three to six DAT-cre+ mice and one WT mouse were used independently of their sex.
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2

Adeno-associated Virus-mediated TLR3 Knockdown in Hippocampus

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The adeno-associated virus (AAV) rAV-hSyn-mCherry-5’miR-30a-shRNA-3’miR-30a-WPREs (Shumi Technology, Wuhan, China) was used for TLR3 neural-specific knockdown. The transfection reagent (Engreen, Beijing, China) was used to dilute the primary solution of AAV-TLR3 (AAV+) and AAV-control (AAV). A stereotaxic apparatus (RWD Life Science, Shenzhen, China) was used for the injection of the hippocampus. AAV solution (0.2 µl) was slowly injected into the hippocampus by a NanoFil needle, a NanoFil syringe and a MicroSyringe Pump Controller (World Precision Instruments, Sarasota, FL, USA). The coordinates are antero-posterior = −2.00 mm, medio-lateral = ±1.8 mm and dorso-ventral= −1.7 mm. Bilateral intrahippocampal injection of AAV-TLR3 was the same as AAV control.
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3

Thalamic Circuit Monitoring in Mice

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Twelve- to 14-week-old male mice were used for the chronic monitoring of the EEG/EMG signals. The mice were anesthetized with 0.2% tribromoethanol (20 ml/kg, intraperitoneal injection; Sigma-Aldrich, St. Louis, MO, USA) and placed on a stereotaxic frame (David Kopf Instruments, Tujunga, CA, USA). Cre-inducible vectors containing adeno-associated virus (AAV9.hsyn.HI.eGFP-Cre.WPRE.SV40) were bilaterally injected into the ventrobasal complex region of the thalamus (anteroposterior, −1.82 mm; lateral, ±1.75 mm; ventral, −3.5 and −3.0 mm, 1 μℓ in each site) using a NanoFil needle (NF33BL; World Precision Instruments, Sarasota, FL, USA) with a Hamilton syringe and pump (SP100IZ; World Precision Instruments, USA). AAV9.hsyn.eGFP.WPRE.bGH was used as control. For the EEG recordings, epidural electrodes with a 6-pin surface mount connector with EMG leads (8231-SM; Pinnacle Technology, USA) were implanted in the frontal and parietal lobes. For the EMG signal recordings, EMG leads were inserted into the nuchal musculature and a grounding electrode was implanted in the occipital region of the skull.
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4

Viral Labeling of Neural Circuits

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Mice were anesthetized with 2% avertin (20 µl/g, i.p.) and placed on stereotaxic apparatus (Kopf instrument, USA). AAV-hALDH1L1-Cre virus was injected through 33 gauge blunt NanoFil needle (World Precision Instruments, USA), connected with 10 µl Hamilton micro syringe (Hamilton, Switzerland) filled with distilled water. Syringe pump (KD Scientific, USA) was used to inject the virus with the rate of 0.2 µl per minute. Needle was gently placed into target regions (thalamic VB: -1.8 mm AP, ±1.6 mm ML, 3.75 mm (1 µl) and 3.25 mm (1 µl) from brain surface; hippocampal CA1: -1.8 mm AP, ±1.6 mm ML, 1.6 mm (2 µl) from brain surface; BLA: -1.8 mm AP, ±3.4 mm ML, 4.55 mm (2 µl) from brain surface; mPFC: 1.8 mm AP, ±0.3 mm ML, 1.7 mm (2 µl) from brain surface), bilaterally. Mice were sacrificed after 10 days recovery.
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5

Spatially-Restricted Gene Transduction in Mice

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Bilateral injection of rAAVs into the spinal parenchyma of adult mice allows for spatially- and temporally-restricted, stable gene transduction without causing persistent inflammation, tissue injury, or glial scar formation6 (link),10 (link),87 (link). Mice were anesthetized with a mixture of fentanyl (50 µg/kg), midazolam (5 mg/kg), and medetomidine (0.5 mg/kg), and laminectomy was performed. Using a microprocessor-controlled minipump and a 35 gauge bevelled “NanoFil” needle (World Precision Instruments), 500 nl of a 2:1 mixture of rAAV stock with 20% mannitol were injected into the parenchyma of the spinal cord dorsal horn of the L3-L5 segments on each side (total of two injections per mouse) at a flow rate of 100 nl/min6 (link),10 (link),87 (link). Anesthesia was reversed using a mixture of atipamezole (0.75 mg/kg), flumazenil (0.5 mg/kg), and naloxon (1.2 mg/kg), and the animals placed overnight on a heating plate set to 39 °C. Mice were allowed to recover for a minimum of 3 weeks after surgery before further analysis to allow for transgene expression. After experiments, mice were sacrificed, and correct delivery and expression or functionality of the injected rAAVs was assessed.
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6

Targeted Spinal Cord Gene Silencing

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Adult male C57Bl/6N mice at 8 to 10 weeks of age were anesthetized with
fentanyl/medetomidine/midazolam (50 µg/kg; 5 mg/kg; 500 µg/kg), and laminectomy
was performed. Five hundred nanolitres of a 2:1 mixture of rAAV stocks with 20%
mannitol were injected into the spinal cord dorsal horn of the L3-L5 segments on
each side (total of two injections per mouse) using a microprocessor-controlled
minipump and a 35 gauge bevelled NanoFil needle (World Precision Instruments,
Sarasota, FL) at a flow rate of 100 nl/min. Animals were assigned to the
different groups (rAAV-shControl or
rAAV-shDnmt3a2) randomly. Mice were allowed to recover for
at least three weeks after surgery before further analysis. Following
behavioural studies, animals were sacrificed and viral spread was assessed by
fluorescence microscopy.
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7

In Vivo Dentate Gyrus Targeting

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Mice were deeply anesthetized and placed into a stereotactic apparatus. Microinjections were performed at a rate of 100 nl/min using a programmable syringe pump with a 35-gauge beveled NanoFil needle (World Precision Instruments, United States). For in vivo CAM targeting, 500 nl of the above mentioned viruses were injected into the ventral dentate gyrus (−3.4 mm anterior/posterior, 2.9 mm middle/lateral, −3.3 mm ventral/dorsal to bregma). To induce MF sprouting, 70 nl of KA (5 mM) was injected into the same position 4 weeks later or into gRNA non-injected animals.
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8

In vivo CRISPR-mediated genome editing in mouse retina and brain

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In vivo electroporation to P0 ICR mouse retina was performed as described28 (link),46 (link). Briefly, a DNA mixture (3 μg/μl) composed of a pX330-based CRISPR construct (1 μg/μl), a knock-in targeting vector (1 μg/μl), and a transfection control plasmid (pCAG-EGFP, pCAG-H2B-EGFP pCAG-mCherry, or pCAG-H2B-mCherry, 1 μg/μl) was injected into the subretinal space of P0 mouse pups using a pulled glass needle, and electric pulses (80 V) were applied (five square pulses of 50 ms duration with 950 ms intervals) using the CUY21 electroporator (Nepagene, Chiba, Japan) and electrodes (Nepagene, CUY650-5). When two pX330-based CRISPR constructs were used together, each concentration was 0.5 μg/μl (total 1 μg/μl). In vivo electroporation to E14.5 ICR mouse brain was performed as described47 (link),48 (link). Briefly, a DNA mixture composed of two pX330-based CRISPR constructs (0.5 μg/μl each), a knock-in targeting vector (1 μg/μl), and pCAG-tdTomato (1 μg/μl) was injected into the lateral ventricles of E14.5 mouse embryos in utero using a 35-gauge NanoFil needle (World Precision Instruments) connected to a NanoFil 10 μl syringe (World Precision Instruments), and electric pulses (50 V) were applied (five square pulses of 50 ms duration with 950 ms intervals) using the CUY21 electroporator and electrodes (Nepagene, CUY650-5).
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9

Viral Cre-mediated Cortical Knockdown

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Pups were injected with 0.5μl AAV2/1-synapsin-Cre (Penn Vector Core, Philadelphia, PA) [1.99×1013 genome copies/ml] was injected into 2 sites in the motor cortex unilaterally with a 36ga NanoFil needle (World Precision Instruments Inc.). Mice were sacrificed 7 days later and the motor cortex was isolated and homogenized in lysis buffer (20 mM Tris HCl, pH 7.5, 150 mM NaCl, 1 mM EDTA, 1 mM EGTA, 10 mM NaF, 10 mM β-glycerophosphate, 1 mM Na3VO4, 0.5% wt/vol sodium dodecyl sulfate, 1% vol/vol TritonX-100, and cOmplete protease inhibitor cocktail (Roche, Indianapolis, IN). Protein was analyzed by Western blot (40μg/well). Antibodies used for Western mouse anti-Ryk [20μg/ml] (Johns Hopkins Monoclonal Antibody Core), GAPDH [1:1000] (EMD Millipore, Billerica, MA, catalog #MAB374, RRID:AB_2107445).
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10

Viral Cre-mediated Cortical Knockdown

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Pups were injected with 0.5μl AAV2/1-synapsin-Cre (Penn Vector Core, Philadelphia, PA) [1.99×1013 genome copies/ml] was injected into 2 sites in the motor cortex unilaterally with a 36ga NanoFil needle (World Precision Instruments Inc.). Mice were sacrificed 7 days later and the motor cortex was isolated and homogenized in lysis buffer (20 mM Tris HCl, pH 7.5, 150 mM NaCl, 1 mM EDTA, 1 mM EGTA, 10 mM NaF, 10 mM β-glycerophosphate, 1 mM Na3VO4, 0.5% wt/vol sodium dodecyl sulfate, 1% vol/vol TritonX-100, and cOmplete protease inhibitor cocktail (Roche, Indianapolis, IN). Protein was analyzed by Western blot (40μg/well). Antibodies used for Western mouse anti-Ryk [20μg/ml] (Johns Hopkins Monoclonal Antibody Core), GAPDH [1:1000] (EMD Millipore, Billerica, MA, catalog #MAB374, RRID:AB_2107445).
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