The largest database of trusted experimental protocols

36 protocols using apoptosis necrosis detection kit

1

Apoptosis and Necrosis Detection Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cell apoptosis and necrosis were evaluated at 4 h after plasma exposure using the Apoptosis/Necrosis Detection Kit (Abcam, UK) according to the manufacturer’s instructions. Phosphatidylserine binding to Apopxin Deep Red (APC) (Ex/Em = 630/660 nm) indicated apoptotic cells. DNA Nuclear Green, DCSI (Ex/Em = 490/525 nm), a membrane-impermeable dye, staining the nucleus of damaged cells, indicated late apoptotic and necrotic cells. Plasma treated or untreated cells were collected and measured on a MACSQuant Analyser 16 (Miltenyi Biotec, Germany). The data were analysed using MACSQuantify software 2.13 (Miltenyi Biotec, Germany).
+ Open protocol
+ Expand
2

Apoptosis Detection in TSPO Ligand-Treated Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Apoptotic cell death levels were measured using apoptosis/necrosis detection kit according to the manufacturer’s protocol (Abcam, Cambridge, UK). Cells were grown in 12-well plates for 48 h, followed by pretreatment with our TSPO ligands MGV-1 and 2-cl-MGV1 and, on the next day, exposed for 60 min of CS. Following CS exposure, the cells were trypsinized, centrifuged and collected in an assay buffer. Then, the Apopxin green indicator was added to the cells and incubated for 45 min. A FACS instrument, CyAN ADP (Beckman Coulter, Brea, CA, USA), was used to measure the mean fluorescence intensity. The data were analyzed using FlowJo software (FlowJo LLC, Ashland, OR, USA).
+ Open protocol
+ Expand
3

Apoptosis and Viability Imaging

Check if the same lab product or an alternative is used in the 5 most similar protocols
The Apoptosis/Necrosis Detection Kit (Abcam, ab176749) was used according to the manufacturer protocol. Briefly, myocytes were incubated in assay buffer containing Apopxin Green indicator for apoptosis and CytoCalcein indicator for healthy cells and incubated for one hour at room temperature. The cells were washed with assay buffer and imaged using a Zeiss LSM 880 at 10X magnification. Excitation/emission parameters: Apopxin Green – 488/525nm, CytoCalcein – 405/450nm. Image scoring was performed by an experimenter blinded to the treatment groups.
+ Open protocol
+ Expand
4

Quantifying Mechanically-Induced Cell Death

Check if the same lab product or an alternative is used in the 5 most similar protocols
A431 cell death was analyzed at 0, 24, and 48 h after mechanical vibration using an Apoptosis/Necrosis Detection Kit (ab176749; Abcam, Cambridge, UK) according to the manufacturer's instructions. This kit enables discrimination between apoptotic and necrotic cells. The cells were visualized with an Eclipse Ti‐S inverted microscope (Nikon, Tokyo, Japan) and images were captured using NIS‐Elements D version 4.30 software followed by processing and quantification of live/dead cells with ImageJ software (National Institutes of Health, Bethesda, MD, USA).
+ Open protocol
+ Expand
5

Photodynamic Therapy of Macrophages

Check if the same lab product or an alternative is used in the 5 most similar protocols
RAW264.7 macrophages (5 × 105 cells/well) were seeded and stimulated with LPS or with LPS in the presence of LDL for 24 h. They were then treated with DS-Ce6 (equiv. 5 μM Ce6) for 1 h and the medium was replaced with fresh cell culture medium. The cells were irradiated using a 670 nm laser (50 mW, irradiated area 3.8 cm2) for 10 s and further incubated for 1 min and 2 h. For comparison, non-irradiated cells were prepared. Apoptosis induction was detected using a commercial Apoptosis/Necrosis Detection Kit (Abcam). The fluorescence signal was examined using a model LSM 780 Meta NLO confocal microscope (Carl Zeiss). The rate of apoptosis was quantified as the percentage of annexin V-positive cells per at least 40 cells (n = 5) [53 (link)].
+ Open protocol
+ Expand
6

Evaluating the Anti-Proliferative Effects of MSCs on Mesothelioma Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Both MSCs LYS and MSCs CM were tested in vitro for their anti-proliferative activity on MSTO-211H, NCI-H2452 and NCI-H2052 cells in 96 multi-well plates (Sarstedt, Nümbrecht, Germany), as previously described [23 (link),24 (link)]. Briefly, 1:2 serial dilutions MSCs LYS and MSCs CM were performed in 100 µL of culture medium/well, and then, 103 tumor cells were added to each well. Cell growth was evaluated after 7 days of culture by measuring the optical density at 550 nm in an MTT (3-(4,5-dimethyl-2-thiazolyl)-2,5- diphenyl-2-H-tetrazoliumbromide) assay [25 (link)]. Cell death was assessed by Hoechst 33342 and propidium iodide dual staining and by using the Apoptosis/Necrosis Detection Kit (Abcam, Cambridge, UK). Caspase-3 activity was measured by the Caspase-3 Assay Kit (Abcam) following the supplier’s protocols. The distribution of the cells in the cell cycle (determined by PI staining and flow cytometry analysis) was determined as described elsewhere [26 (link)].
+ Open protocol
+ Expand
7

Apoptosis and Necrosis Detection in HepG2 Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
An Apoptosis/Necrosis detection kit (Abcam) was used to simultaneously monitor apoptotic, necrotic and healthy cells through staining with Apopxin Green Solution (green Ex/Em = 490/525 nm) to detect phosphatidylserine (PS) as marker of initial/intermediate stages of apoptosis, with 7-AAD (/-aminoactinomycin D) (red Ex/Em = 546/647 nm) to detect loss of plasma integrity, characteristic of late apoptosis and necrosis. Briefly, 8 × 105 HepG2/SB3 and HepG2/Ctrl cells were seeded onto coverslip and grown until semi-confluence. After overnight treatment with 100 μM H2O2, cells were washed twice and incubated with staining probes and incubated at room temperature for 1 h. After washing, the slides were mounted with ELVANOL (Sigma-Aldrich, St. Louis, MO, USA) and observed under a fluorescence microscope (Axiovert 200M, Carl Zeiss MicroImaging GmbH, Gottingen, Germany).
+ Open protocol
+ Expand
8

Apoptosis Detection using Microscopy

Check if the same lab product or an alternative is used in the 5 most similar protocols
Apoptosis was detected using the Apoptosis/Necrosis Detection Kit (Abcam) according to the manufacturer's instructions. Apoptotic cells were stained with Apopxin Green Indicator, and viable cells were stained with CytoCalcein Violet 450. Images were acquired using a microscope (Olympus IX51, Olympus) and analyzed using ImageJ.
+ Open protocol
+ Expand
9

Apoptosis and Necrosis Assay in HeLa Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
HeLa cells were treated with various treatments for 12 h, and the cells were stained with the Apoptosis/Necrosis Detection Kit (Abcam) according to the manufacturer’s instructions. Images of Apopxin Green and 7-aminoactinomycin D (7-AAD) were obtained under a Zeiss Axiovert fluorescence microscope. The cells stained with Apopxin Green were counted as early stages of apoptotic cells, and the cells labeled with 7-AAD were counted as necrotic cells using ImageJ software (NIH).
+ Open protocol
+ Expand
10

Apoptosis and Proliferation of AT2 Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
To measure apoptosis, AT2s isolated from newborn mouse lungs were exposed to normoxia or hyperoxia and treated with saline or T3 (0.8 ng/mL) for 72 hours and then stained with Apopxin green and 7-aminoactinomycin D (7-AAD) using an Apoptosis/Necrosis Detection Kit (Abcam, catalog ab176749). An LSRII flow cytometer (BD Biosciences) was used to quantify Apopxin green (Ex/Em = 490/525 nm) and 7-AAD (Ex/Em = 550/650 nm) fluorescence, and FlowJo software 10.8 (BD Biosciences) was used to analyze the results as described by the manufacturer (58 (link)).
AT2 proliferation was measured in cells exposed to normoxia or hyperoxia and treated with saline or T3 (0.8 ng/mL) for 72 hours using a CyQuant cell proliferation assay kit (Invitrogen, catalog MP 07026) and a fluorescence spectrophotometer (SpectraMax i3X) according to manufacturer’s instructions (59 (link)).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!