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19 protocols using mccoy s 5a medium

1

Cell Culture of MCF7, A549, and HCT116

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MCF7 cells were cultured in Dulbecco's Modified Eagle's Medium (DMEM; WelGENE, Daegu, Korea), A549 cells were cultured in RPMI 1640 (WelGENE), and HCT116 cells were cultured in McCoy's 5A medium (WelGENE) at 37 °C in a 5% CO2 incubator. Cell culture medium was supplemented with 10% fetal bovine serum (Lonza, Basel, Switzerland), 1% penicillin, and streptomycin solution (WelGENE).
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2

Cultivation of HCT116 Colon Cancer Cells

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The human colon cancer cell line, HCT116, was obtained from the American Type Culture Collection (ATCC, Rockville, MD, USA) and was maintained in McCoy’s 5A medium (Welgene, Daegu, Korea) containing 10% fetal bovine serum (FBS) (Hyclone, Logan, UT, USA), 100 U/mL penicillin, and 100 μg/mL streptomycin (Invitrogen, Carlsbad, CA, USA). The cells were maintained at 37 °C in a 95% air and 5% CO2 humidified atmosphere.
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Cell culture of HCT116, MCF7, and HEK293T

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MCF7 cells and HEK293T cells were grown in Dulbecco's modified Eagle's medium (WelGENE, Daegu, Korea). DICER knockout (−/−) HCT116 cell line, which was developed by Kim et al. (38 (link)), was purchased from the Korean Collection for Type Cultures (KCTC), Korea Research institute of Bioscience and Biotechnology (KRIBB), Korea. HCT116 parent cells and DICER knockout (−/−) HCT116 cell lines were grown in McCoy's 5A medium (WelGENE). Cells were cultured with 10% Fetal Bovine Serum (Lonza Group Ltd., Basel, Switzerland) and 1% penicillin and streptomycin solution (WelGENE) at 37°C in a 5% CO2 incubator.
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4

5-aza-dC Treatment of HCT116 Cells

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The human colorectal carcinoma cell line HCT116 was obtained from ATCC and cultured in McCoy’s 5A medium (WelGENE) with 10% fetal bovine serum (Hyclone) and 1% penicillin/streptomycin (Gibco) at 37°C in a humid incubator with 5% CO2. The cells were treated with 0.5 μM 5-aza-dC (Sigma) for 3 days, replacing media and 5-aza-dC every 24 hrs.
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5

Human Colon Cancer Cell Lines Cultivation

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The human colon cancer cell lines, HCT116 and HT-29, were purchased from the American Type Culture Collection (ATCC, Rockville, MD, USA) and were maintained in McCoy's 5A medium (Welgene, Daegu, Korea) supplemented with 10% fetal bovine serum (FBS; Hyclone, Logan, UT, USA) and 1% penicillin/streptomycin (100 U/mL and 100 μg/mL; Invitrogen, Carlsbad, CA, USA). The cells were cultured in humidified air at 37°C with 5% CO2. BC was purchased from Sigma-Aldrich Chemical Co. (St. Louis, MO, USA).
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6

Isolation and Culture of Cancer Stem Cells

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The human colon cancer cell line, HCT116 was purchased from American Type Culture Collection (ATCC, Manassas, VA, USA). HCT116 cells were double-stained with CD133 and CD44 monoclonal antibodies (Miltenyi Biotec, Bergisch Gladbach, Germany) and sorted with a FACSAria flow cytometer (BD, Franklin Lakes, NJ, USA). CD133+CD44+ HCT116 CSCs were maintained in McCoy’s 5A Medium (Welgene, Daegu, Korea) supplemented with 10% FBS (Gibco, Gaithersburg, MD, USA) and 1% penicillin streptomycin (100 U/mL and 100 μg/mL, respectively; Invitrogen, Carlsbad, CA, USA). BC (Sigma-Aldrich, St. Louis, MO, USA) was dissolved in tetrahydrofuran (Sigma-Aldrich) under dim light. Concentration of 20 μM BC (BC 20) and 40 μM BC (BC 40) were applied to HCT116 cells for 6 days. Following the dissolution of 5-aza-2′-deoxycytidine (AZA; Sigma-Aldrich) in dimethylsulphoxide (DMSO; Sigma Aldrich), this solution was incubated with cells for 3 days. Cultured medium was replaced every 48 hours with fresh media and BC.
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7

Culturing Human Colon Cell Lines

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Human CRC HCT116, DLD-1, HT29, and SW620 cells, as well as human colon CCD-18Co and FHC cells, were purchased from the American Type Culture Collection (ATCC, Manassas, VA, USA) and the HCT116 Luc+ Cells were obtained from the Japanese Collection of Research Bioresources Cell Bank (Osaka, Japan). Moreover, all cell lines were not mycoplasma contamination.
The HCT116 and HCT116 Luc+ cells were grown in McCoy’s 5A medium (Welgene, Farmingdale, NY, USA), the CCD-18Co cells were cultured in Eagle Minimum Essential Medium (EMEM, ATCC), and the other cell lines were grown in RPMI 1640 medium. All media were supplemented with 10% fetal bovine serum (HyClone, Logan, UT, USA) in a 37 °C humidified chamber with 5% CO2.
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8

Culturing Human Colorectal Cancer Cell Lines

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Human colorectal carcinoma HCT116, SW480, and LoVo cell lines were purchased from American Type Culture Collection (ATCC, Rockville, MD, USA). HCT116, SW480 cells were maintained in McCoy’s 5A Medium (Welgene, Gyeongsan, Korea) and LoVo cell was maintained in Roswell Park Memorial Institute Medium (RPMI 1640, Welgene) supplemented with 10% fetal bovine serum (FBS, Gibco, Grand Island, NY, USA), 1% penicillin-streptomycin (Gibco) and 1% Sodium Pyruvate (Gibco) at 37°C in an incubator containing 5% CO2 atmosphere.
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9

Cell Culture and Signaling Modulation

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HEK293T cells were grown in Dulbecco’s modified Eagle medium (DMEM, Welgene, Gyeongsan, Republic of Korea). HT29 cells were grown in McCoy’s 5A medium (Welgene). CCD-18Co cells were grown in minimum essential medium (MEM, Welgene). DLD-1 cells were grown in Roswell Park MEMorial Institute (RPMI) 1640 medium (Welgene). LoVo cells were grown in Ham’s F-12K (Kaighn’s) medium (Ham’s F-12K, Welgene). All cells were grown in media supplemented with 10% fetal bovine serum (FBS, Welgene) and 1% penicillin/streptomycin (P/S, Welgene). Cells were maintained in a humidified atmosphere of 5% CO2 at 37 °C.
Cells were treated with rapamycin (25 nM) or PF-4708671 (10 μM) to inhibit mTOR or S6K1 activities, respectively, or the same amount of DMSO as a control. Cells were treated with Wnt-3a (300 ng/mL) or LiCl (25 mM) for the indicated time points.
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10

Culturing Human Colorectal Cancer Cell Lines

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The human colorectal carcinoma cell lines: HCT116, SW480, Colo320, and RKO, which were obtained from the American Type Culture Collection (ATCC, VA, USA), as well as a double-knockout cells (DKO) for DNA methyltransferase-1 and DNA methyltransferase-3b in HCT116 cell line [16] (link), which retains <5% genomic DNA methylation, were cultured at 37°C with 20% O2 and 5% CO2. The HCT116, DKO, and SW480 cells were maintained in McCoy's 5A medium (WelGENE, Daegu, Korea). Colo320 cells were maintained in RPMI medium (WelGENE). RKO cells were maintained in Dulbecco's Modified Eagle Medium (DMEM)(WelGENE) containing 10% fetal bovine serum (Hyclone, Logan, UT, USA) and 1% antibiotic-antimycotic (Gibco, Grand Island, NY, USA). The cells were treated with 5-aza-dC (0.5 or 1 µM; Sigma-Aldrich, St. Louis, MO, USA) once daily for 3 days (Figure S1).
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