The largest database of trusted experimental protocols

17 protocols using 10 013 cvr

1

Induction of Epithelial-Mesenchymal Transition in Breast Cancer Cell Lines

Check if the same lab product or an alternative is used in the 5 most similar protocols
The human breast cancer cell lines MCF-7 and MDA-MB-231 used in this research were obtained from Yingbio Technology. MCF-7 cells were incubated in Dulbecco's modified Eagle's medium (10-013-CVR; Corning, Inc.) with 10% (v/v) heat-inactivated fetal bovine serum (FBS; Gibco; Thermo Fisher Scientific, Inc.) and 1% penicillin-streptomycin (P/S, E607011; Sangon Biotech Co., Ltd.) and were cultured in a humidified 37°C incubator with 5% CO2. While MDA-MB-231 cells were incubated in Leibovitz's 15 medium (L15, E600016-0500; BBI Solutions) with 10% (v/v) FBS and 1% P/S and were cultured in a humidified 37°C incubator with 100% air. These cells, which were incubated in medium with 0.5% FBS, were treated with 20 ng/ml TGF-β1 (100-21-10; Peprotech, Inc.) for 48 h (24 (link),25 (link)). The control cells were incubated in medium with 0.5% FBS and treated with DMSO. Then, cell pictures were captured by an inverted phase-contrast microscope (Shanghai Optical Sixth Factory). The cells treated by TGF-β1 were named as cell-EMT and the control cells were named as cell-blank.
+ Open protocol
+ Expand
2

Affinity Purification of Tagged Proteins

Check if the same lab product or an alternative is used in the 5 most similar protocols
HEK293T, HeLa and NIH3T3 cells were cultured in DMEM with 4.5 g l−1 glucose, l-glutamine and sodium pyruvate (CORNING, 10-013-CVR) with 10% fetal bovine serum under standard condition. Plasmids were transfected using PEI (P3143, Sigma) or Lipofectamine 2000 (Invitrogen, 11668-019) according to manufacturer’s instruction. Cells were collected and lysed in ice-cold IP buffer (50 mM Tris-HCl, pH 8.0, 100 mM NaCl, 1 mM EDTA, 0.5% NP-40, 10% Glycerol) supplemented with protease inhibitor cocktail at 4 °C for 30 min. Cell lysis was clarified and incubated with M2-affinity gel (A2220-5ML) at 4 °C for 60 min. The gel was washed and eluted by 1× SDS-PAGE loading buffer for immunoblotting analysis.
+ Open protocol
+ Expand
3

Isolation and Culture of Primary Murine Neuronal Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
The DRG and sciatic nerves were isolated from c57/BL6NJ mice at postnatal day 15 (P15) and transferred to the conical tube containing trypsin of 0.25% (25‐053‐CI, Corning, New York) and 1 mg/mL of collagenase (C2139, Sigma‐Aldrich, Saint Louis, Missouri). The primary tissues were incubated for 30 minutes at 37°C for digestion followed by centrifugation. The cell pellets were suspended in DMEM (10‐013‐CVR, Corning) containing fetal bovine serum of 15% (35‐016‐CV, Corning) and penicillin‐streptomycin of 1% (30‐002‐CI, Corning) after being washed with DPBS (21‐030‐CVR, Corning). The primary cells were cultivated on the coverslips in 35‐mm dishes or 6‐well plates coated with poly‐d‐lysine hydrobromide (P6407, Sigma‐Aldrich) in 5% CO2 at 37°C.
+ Open protocol
+ Expand
4

Immortalized Rat NP Cell Response to FSS

Check if the same lab product or an alternative is used in the 5 most similar protocols
An immortalized rat NP cell line used in this study was described in Oh et al. (2016) (link). The cells were cultured in Dulbecco’s Modification of Eagle’s Medium (10-013-CVR; Corning, United States) containing 10% FBS (10099-141; Gibco, Australia) supplemented with 1% penicillin-streptomycin (SV30010; Hyclone, United States) at 37°C with 5% CO2. FSS experiments were conducted as previously described (Yang et al., 2019 (link)). Cells were seeded onto collagen I-coated culture slips (75 mm × 25 mm × 1 mm; FFCS-C; Flexcell, United States) at a density of 3.0 × 104/cm2 and incubated in a 5% CO2 incubator at 37°C. When cells reached up to 85% confluence, the slips were then placed in a parallel plate flow chamber of Streamer® System (STR-4000; Flexcell, United States) (Figure 1B) and cells are exposed to 12 or 24 dyne/cm2 FSS for 0, 1, 2, 3, and 4 h. For certain experiments, NP cells were pre-treated with 10 μM CoPP (Sigma, United States, C1900) for 1 h or 500 nM rapamycin (Selleck, United States, S1039) for 12 h before exposure to FSS.
+ Open protocol
+ Expand
5

Culturing PDAC Cell Lines

Check if the same lab product or an alternative is used in the 5 most similar protocols
Human PDAC cell lines (BxPC-3 and PANC-1) were purchased from Shanghai Genechem Co., Ltd. PANC-1 and BxPC-3 cells were cultured in DMEM (10-013-CVR, Corning) and RPM1-1640 cell culture medium (15-059-CVR, Corning), respectively, containing 10% fetal bovine serum (FBS, VS500 T, A11-102, Ausbian).
+ Open protocol
+ Expand
6

Culturing FaDu and Tca-8113 Cell Lines

Check if the same lab product or an alternative is used in the 5 most similar protocols
The cell lines FaDu (human pharyngeal squamous carcinoma cell) and Tca-8113 (human tongue squamous carcinoma cell) were purchased from Cell Bank of the Chinese Academy of Sciences in Shanghai and cultured in DMEM medium (10-013-CVR, Corning) containing 10% FBS (VS500T, Ausbian), 100 U/ml penicillin and 0.1 mg/ml streptomycin at 37°C in a humidified atmosphere containing 5% CO2.
+ Open protocol
+ Expand
7

Huh7 Cell Culture Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
Huh7 cells were obtained from the American Type Culture Collection (ATCC). The cells were cultured in Dulbecco's modified Eagle's medium containing 4.5 g/L glucose (Corning, 10-013-CVR) supplemented with 10% (v/v) fetal bovine serum (FBS) (HyClone, SH30084.03). Cells were grown in a humidified cell culture incubator containing 5% CO2 at 37˚C. All cells were routinely tested as mycoplasma-free with the Mycoplasma Detection kit (Bimake, B39032).
+ Open protocol
+ Expand
8

Isolation and Propagation of EV-A71

Check if the same lab product or an alternative is used in the 5 most similar protocols
CMU4232 (EV71/CMU4232-1/BJ/CHN/2008) was originally isolated from a HFMD patient by our group during the 2008 outbreak in Beijing8 (link), and it was passaged in RD cells (National Infrastructure of Cell Line Resource, Beijing, China) and stocked in our laboratory. An infectious cDNA clone of EV-A71 (pSVA14-Isehara ver4) was kindly provided by Professor Satoshi Koike, Tokyo Metropolitan Institute of Medical Science, Tokyo, Japan. The RD cell line was cultured in DMEM containing 4.5 g/L glucose, L-glutamine, and sodium pyruvate (Corning, 10-013-CVR, USA) supplemented with 10% fetal bovine serum (FBS) (Corning, 35-076-CV, USA), 100 IU of penicillin, and 100 μg of streptomycin per ml. The cells were incubated at 37 ℃ and with 5% CO2. CMU4232 and the rescued virus, CDV-Isehara were harvested from RD cultures by freezing and thawing three times and were stored at −80 ℃. The titers of the virus stocks were tested using a modified plaque-forming assay and determining the CCID50.
+ Open protocol
+ Expand
9

Schwann Cell Isolation and Manipulation

Check if the same lab product or an alternative is used in the 5 most similar protocols
Primary Schwann cells were collected from sciatic nerves of neonatal SD rats, purified with anti-Thy1.1 (1:1000, M7898, Sigma) and rabbit complement (Invitrogen, Carlsbad, CA, USA), and cultured in Dulbecco’s modified Eagle’s medium (DMEM; 10-013-CVR, Corning, NY, USA) containing 10% fetal bovine serum (FBS; 10099141c, Gibco, Grand Island, NY, USA), 1% penicillin and streptomycin (c0222, Beyotime, Shanghai, China), 2 μM forskolin (Sigma), and 10 ng/ml β-heregulin (HRG; R&D Systems Inc., Minneapolis, MN, USA) in a humidified 5% CO2 incubator at 37 °C. For LIF or EREF knockdown, cultured primary Schwann cells were transfected with siRNA segments targeting LIF (siRNA-1 sequence: GCTCATTCTGCACTGGAAA and siRNA-2 sequence: ATGCCAATGGGACAGAGAA), a siRNA segment targeting ERFE (sequence: TGAAGGAGTTCCAGTTGTT), or a non-targeting negative control (random sequence, RiboBio, Guangzhou, Guangdong, China) for 48 h using Lipofectamine RNAiMAX transfection reagent (Invitrogen). For LIF overexpression, cultured primary Schwann cells were transfected with LIF-overexpressing-lentivirus (pLenti-CMV-EGFP-P2A-LIF-3FLAG) or a negative control lentivirus (pLenti-CMV-EGFP-P2A-MCS-3FLAG) (OBiO, Shanghai, China) for 72 h.
+ Open protocol
+ Expand
10

Cultivating and Characterizing Enterovirus Strains

Check if the same lab product or an alternative is used in the 5 most similar protocols
The RD cells (human embryo rhabdomyosarcoma) were cultured in DMEM containing 4.5 g/L glucose, L-glutamine, and sodium pyruvate (Corning, 10-013-CVR, USA), supplemented with 10% FBS (Corning, 35-076-CV, USA), 100 IU of penicillin, and 100 μg of streptomycin per ml. The cells were incubated at 37°C with 5% CO2. The “vaccine strain”,the three epidemic strains and BrCr that harvested from RD were cultured by freezing and thawing three times and were stored at −80°C. The titers of the virus stocks were tested using a modified plaque-forming assay and determining the CCID50.
The BrCr strain was derived from the American 1969 isolate, “vaccine strain” was a clinical isolate from China in 2008, 10 C4 strain (2010 years), 13 C4 strains (2013 years) and 16 C4 strains (2016 years) were all isolated from Chinese clinical isolates of corresponding years, all above are provided by the Centers for Disease Control (CDC).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!