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8 protocols using nutristem xf medium

1

Episomal Reprogramming of Skin Fibroblasts

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1 × 105 skin fibroblasts were nucleofected with three episomal plasmids: pCXLE-hUL (Addgene #27080), pCXLE-hSK (Addgene #27078) and pCXLE-hOCT4-shp53 (Addgene #27077), and plated in fibroblast medium for one week. From day 8 the cells were cultured in NutristemXF medium (Biological Industries, Kibbutz Beit Haemek, Israel). iPSC colonies were manually cut and passaged for expansion. Absence of mycoplasma contamination was verified by PCR analysis using EZ-PCR kit (Biological Industries, Kibbutz Beit Haemek, Israel).
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2

Characterization of Human Mesenchymal Stem Cells

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HucMSCs were provided by Stem Cell Bank, Chinese Academy of Sciences and cultured in serum-free MSC NutriStem® XF Medium (Biological Industries, Beit HaEmek, Israel). When the cells grew to 80–90% confluence, they were digested with 0.25% trypsin containing 0.01% EDTA. The cells were resuspended in PBS and adjusted to 1 × 106 cells/ml. The mouse antihuman CD34, CD45, CD44, and CD105 were added and incubated at 4°C in dark for 15–30 min. Surface antigens of MSCs were characterized by using a Beckman CytoFLEX flow cytometer (Beckman Coulter Life Sciences, Tokyo, Japan) and the Human MSC Analysis Kit (BD Biosciences, San Jose, CA, United States).
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3

Robust Xeno-Free iPSC Generation

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Human fibroblasts were reprogrammed, stabilized, and expanded under xeno-free conditions by Cellular Reprogramming, Inc. (www.cellular-reprogramming.com), as described previously25 (link). Briefly, iPSC colonies were obtained using mRNA reprogramming in a feeder-free culture system. Stable iPSCs were expanded in NutriStem XF medium (Biological Industries) and on biolaminin 521 LN-coated (BioLamina) plates to at least passage 3. iPSCs were then purified using MACS with anti-TRA-1–60 MicroBeads (Miltenyi Biotec) on LS columns according to the manufacturer’s instructions. All fibroblasts and iPSCs were screened and found negative for Mycoplasma; they stained positive for octamer-binding transcription factor 4 (POU domain, class 5, transcription factor 1) and TRA-1–60.
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4

Derivation and Culture of hESC line VUB02

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hESC line VUB02 was derived and characterized as previously described35 (link). Cells were routinely cultured at 37 °C at 5% CO2 on dishes coated with Laminin521® at 10 µg/cm2 (Biolamina) in Nutristem® XF medium (Biological Industries) supplemented with 0.1% penicillin/streptomycin (Thermo Fisher Scientific). Cells were passaged as single cells using TrypLE™ Express (Thermo Fisher Scientific) when 80–90% confluent in a ratio between 1:10 and 1:40. Initial karyotype was determined by aCGH (4 × 44 K, Agilent Technologies) as previously described7 (link).
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5

Isolation and Characterization of Extracellular Vesicles from Human Mesenchymal Stem Cells

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hMSCs (approximately 10,000 cells/cm2) were seeded in MSC media containing human serum for 24 h to allow cell attachment to the bottom of the flasks. The MSC media were removed, and the culture flask washed twice with phosphate buffer saline (PBS) prior to adding serum-free media (MSC NutriStem XF medium, Biological Industries, Kibbutz Beit-Haemek, Israel). Conditioned media (CM) were collected every 48 h, and the cells were passaged at 90% confluency. CM collected were centrifuged (300×g, 4 °C, 5 min) and stored at − 80 °C until use. The hMSCs used in the study were in passage 4–7. The isolation of extracellular vesicles (EVs) was performed by a series of differential centrifugation and filtration of the CM as described in [14 (link)]. Briefly, CM were thawed on water bath and centrifuged at 16,500×g for 20 min followed by filtration through 0.22-μm filters to deplete cell debris and large EVs. The sEV/exosomes were then pelleted by ultracentrifugation at 120,000×g for 70 min in a T-645.5 rotor (Sorvall wx Ultra series, Thermo Scientific, Rockford, IL, USA). The sEV pellets were re-suspended in cold PBS and stored at − 80 °C until use. The whole procedure was performed at 4 °C.
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6

Generation of Human iPSCs from Skin Fibroblasts

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Human iPSCs were obtained as previously described [14 (link)]. Briefly, 1 × 105 skin fibroblasts were nucleofected with three episomal plasmids: pCXLE-hUL (Addgene #27080), pCXLE-hSK (Addgene #27078) and pCXLE-hOCT4-shp53 (Addgene #27077), and plated in fibroblast medium for 1 week. From day 8, the cells were cultured in NutriStem XF Medium (Biological Industries, Kibbutz Beit Haemek, Israel). iPSC colonies were manually cut and passaged for expansion. Absence of mycoplasma contamination was verified by PCR analysis using EZ-PCR kit (Biological Industries, Kibbutz Beit Haemek, Israel).
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7

Derivation and Maintenance of hiPSCs from Mobilized PBMCs

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The parental hiPSC line, registered in the Human Pluripotent Stem Cell Registry (hPSCreg®) as MUSIi012-A (accessible at https://hpscreg.eu/cell-line/MUSIi012-A), was established from CD34+ hematopoietic stem/progenitor cells (HSPCs) collected from G-CSF mobilized peripheral blood of a healthy female donor using non-integrating episomal reprogramming plasmids under ethics approval by Siriraj Institutional Review Board (COA No. Si 248/2011) after informed consent. Cells were maintained on Matrigel-coated plates (Corning, Corning, New York, United States) in NutriStem XF medium (Sartorius, Göttingen, Germany), passaged every 2–3 days using Versene solution (Gibco, Waltham, MA, United States), and cultured in a humidified atmosphere of 5% CO2 at 37°C.
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8

iPSC Cultivation from NK Cells

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Human iPSCs, MUSIi013-A single-cell clone, reprogrammed from UCB-derived NK cells (NK/iPSC) [15 (link)] were routinely cultivated in NutriStem XF medium (Sartorius, Göttingen, Germany) on Matrigel-coated plates (Corning, Corning, New York, NY, USA) and mechanically passaged every two to three days. HEK293FT cells were cultured in high-glucose DMEM (DMEM-HG) medium while hematologic cancer cell lines, including K562, REH, and Raji cells (American Type Culture Collection, Manassas, VA, USA) were cultured in RPMI 1640 medium. DMEM-HG and RPMI1640 medium were supplemented with 10% FBS, L-glutamine, and antibiotics (Gibco, Thermo Fisher Scientific, Waltham, MA, USA). All cells were culture at 37 °C and 5% CO2.
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