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4 protocols using cell lysis buffer

1

Quantitative Proteome Analysis of Stressed Cells

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Tested cells were lysed using the cell lysis buffer (Cwbio, Beijing, China) containing 1% phenylmethylsulfonyl fluoride, and the protein content of the lysates was quantified using the BCA protein assay kit (Cwbio). Cell protein extraction was evaluated by performing Western blot analysis as previously described [21 (link)], with primary antibodies including Anti-Hsp90α (Proteintech, Rosemont, IL, USA), Anti-Hsp27, Hsp70, protein kinase B (Akt), phosphorylated Akt (p-Akt), M2 isoform of pyruvate kinase (PKM2), Heat shock factor -1 (HSF-1), and Cytochrome C (Cyt-C, ZENBIO, Chengdu, Sichuan, China). HRP-conjugated second antibodies (Abbkine, Wuhan, Hubei, China) were used. Finally, reactive bands were quantified using the Quantity One software (ver. 4.6.2; Bio-Rad Laboratories, Hercules, CA, USA). β-actin was used as the loading control.
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2

Cell Lysis and Protein Quantification

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Experimental cells were lysed using cell lysis buffer (CWBio, Beijing, China) containing 1% phenylmethylsulfonyl fluoride, and the total protein content of the lysates was quantified using a BCA protein assay kit (CWBio).
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3

Immunoprecipitation and Western Blotting

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Protein preparation—Total cellular protein was isolated with cell lysis buffer (CWBIO, Beijing China), and membrane and cytoplasmic protein fractions of cultured cells were obtained with a Mem-PER Plus Membrane Protein Extraction Kit (Thermo Fisher Scientific).
Immunoprecipitation—Flag fusion proteins were precipitated with anti-Flag-conjugated beads (Sigma, St. Louis, MO, USA). The proteins bound to beads were eluted with SDS sample buffer and analyzed by SDS-PAGE and quantitative Western blotting.
Immunoblots—Protein samples were loaded on an 8% or 10% polyacrylamide SDS gel and transferred to a polyvinylidene difluoride membrane (Millipore, MA, USA). The membranes were blocked in Tris-buffered saline (TBS; 20 mM Tris-Cl, pH 7.6, 137 mM NaCl) with 5% skim milk. Blots were incubated with the primary antibody diluted in TBS + 5% milk overnight at 4 C, washed three times in TBS + 0.5% Tween 20, and then incubated for 45 min in the peroxidase-conjugated secondary antibody. Blots were developed using the ECL detection kit.
The antibodies used in this study were as follows: anti-Filamin A (Abcam, Rabbit, 1:250,000), anti-Filamin A (phospho S2152) (Abcam, Rabbit, 1:10,000, Cambridge, UK); anti-Caveolin-1 (Proteintech, Rabbit, 1:5000, Wuhan, China); anti-mCherry (TDY bio, Mouse, 1:5000, Beijing, China); anti-Beta-tubulin (TDY bio, Mouse, 1:5000, Beijing, China).
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4

Cellular Signaling Pathway Analysis

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GF2 (purity,≥99%) was purchased from Chengdu PhytoElite Biotech (Chengdu, China). The MEM medium was obtained from Hyclone (Logan, UT, USA). Antibiotics (100 × penicillin/streptomycin) and Trypsin-EDTA were purchased from Gibco (California, USA). Fetal bovine serum (FBS) was purchased from Corning (New Zealand). 2-NBDG and TRIzol reagent were from Invitrogen (Carlsbad, CA, USA). cDNA synthesis kit was purchased from Thermo Fisher Scientific (Waltham, MA, USA). FastStart Universal SYBR Green Master was provided from Roche (Mannheim, Germany). Malondialdehyde (MDA) and superoxide dismutase (SOD) assay kits were acquired form Nanjing Jiancheng Bioengineering Institute (Jiangsu, China). The kits for reactive oxygen species assay, glycogen PAS stain and glycogen content assay were purchased from Solarbio (Beijing, China). Cell lysis buffer and eECL kit were purchased from CWBio (Jiangsu, China). The primary antibodies against p-JNK (#4671), JNK (#9258), p-ERK1/2 (#8544), ERK1/2 (#4348), p-p38 MAPK (#4511), p38MAPK (#9212), NF-κB p65 (#8242), p-AKT (#4060), AKT (#9272), p-PDK1 (#3438), PDK1 (#3062), p-GSK-3β (#5558), GSK3β (#12456), Anti-β-actin pAb-HRP-DirecT (#PM053-7) was from Medical & Biological Laboratories CO., LTD (Nagoya, Japan). Donkey Anti-Rabbit IgG H&L (Alexa Fluor® 647) (ab150075) was from Abcam (Cambridge, MA, USA).
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