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7 protocols using nrf2 sc 13032

1

Western Blot Analysis of Signaling Proteins

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Cell lysates were resolved by sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) and electrophoretically transferred to a polyvinylidene difluoride membrane (PVDF; EMD Millipore). The membrane was probed with antibodies directed against Akt (#4060; Cell Signaling Technology), phospho-Akt (#9271; Cell Signaling Technology), phospho-JNK (#4668; Cell Signaling Technology), HO-1 (ADI-OSA-110; Enzo Life Sciences, Lausen, Switzerland), Nrf2 (sc-13032; Santa Cruz Biotechnology, Santa Cruz, CA, USA), histone deacetylase-2 (HDAC2; Ab7029; Abcam), or GAPDH (MAB-374; EMD Millipore) according to the specifications of the manufacturers. Specific protein bands were visualized using secondary horseradish–peroxidase-conjugated anti-rabbit or anti-mouse antibodies and enhanced chemiluminescence (NA931, NA934; all GE Healthcare).
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2

Protein Interaction Analysis by IP-Western

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Samples were lysed with cold EB buffer (20 mM Tris-HCl, 5 mM EDTA pH 8.0, 150 mM NaCl, 1% Triton X-100, 10% glycerol). One milligram of lysate was precipitated with 2 μg of P62 antibody (MBL-P045, MBL International, City, State if USA/Canada, Country) and protein A Sepharose beads for 2 h at 4 °C. Immunocomplexes were then washed three times with cold EB buffer and separated by SDS-PAGE. Western blotting was performed according to standard methods. Primary antibodies were as follows: p62 (MBL-P045, MBL International), pP62 (MBL-PM074, MBL), pS6 (4858S Cell Signaling), MYC (ab32072 Abcam), LC3 (L7543 Sigma-Aldrich St. Louis, MO, USA), NRF2 (sc-13032, Santa Cruz Biotechnology), KEAP1 (sc-515432, Santa Cruz Biotechnology). Actin was used as the loading control (A3854, Sigma-Aldrich). Band densitometry analysis was done with ImageJ software (NIH).
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3

Protein expression analysis in kidney

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Kidney and cell lysates were extracted with extraction buffer or sample buffer as described previously43 (link). Protein samples were subjected to immunoblotting analysis with antibodies against α-SMA (100M4795; Sigma-Aldrich, St Louis, MO, USA), ASC (sc-22514-R; Santa Cruz Biotechnology, Dallas, TX, USA), caspase-1 (sc-514; Santa Cruz Biotechnology), F4/80 (MCA497GA; AbD Serotec, Raleigh, NC, USA), IL-1β (ab9722; Abcam, Cambridge, MA, USA), Nrf2 (sc-13032; Santa Cruz Biotechnology) and GAPDH (sc-25778; Santa Cruz Biotechnology). Signals were detected using an enhanced chemiluminescence system (GE Healthcare Japan, Tokyo, Japan). Each western blot was performed on a pooled sample of 4–6 mice from each group.
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4

Western Blot Analysis of Antioxidant and Apoptosis Markers

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Western blot analysis was conducted as previously reported [9 ]. In this study, two aortas from the same group were combined and homogenized to extract protein for the western blot assay [24 (link)25 (link)]. The protein content was quantified using a Bio-Rad Protein Assay Kit (Bio-Rad Laboratories, Hercules, CA, USA). Protein expression was visualized by enhanced chemiluminescence and detected with CAS-400 apparatus (Core Bio, Seoul, Korea). The band densities were calculated using ImageJ software (National Institutes of Health, Bethesda, MD, USA) and normalized to the expression of β-actin. The antibodies used in this study; nuclear factor (erythroid-derived 2)-like 2 (Nrf2, sc-13032), superoxide dismutase (SOD, sc-11407), catalase (CAT, sc-34285), glutathione peroxidase (GSHPx, sc-133160), GRP78 (sc-1050), phospho-PERK (p-PERK, sc-32577), X-box binding protein 1 (XBP1, sc-7160), Bcl-2 (sc-7382), and Bax (sc-493) were purchased from Santa Cruz Biotech. (Santa Cruz, CA, USA). Phospho-JNK (p-JNK, MA5-14943) was from Thermo Scientific (Waltham, MA, USA). Phospho-eukaryotic initiation factor 2 subunit alpha (p-eIF2α, ab32157), caspase-3 (ab32351), caspase-9 (ab63488), cellular inhibitor of apoptosis protein (cIAP, ab25939-100), and β-actin (ab8226) were from Abcam Inc. (Cambridge, UK).
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5

Protein Expression Analysis by Western Blot

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Isolation of cell fractions and Western blotting were performed as detailed previously [8 (link)]. Antibodies for NRF1 (sc-13031; 1:500), NRF2 (sc-13032; 1:500), C/EBPβ (sc-7962; 1:500) and C/EBPα (sc-61; 1:500) were obtained from Santa Cruz, Inc. (Santa Cruz, CA). Antibody for NRF1 (12936-1-AP; 1:1000) were from Proteintech Group, Inc. (Rosemont, IL). Antibodies for C/EBPδ (#2318; 1:1000), PPARγ (#2435; 1:1000), CREB (#9197; 1:1000) and p-CREB (#9198; 1:1000) were purchased from Cell Signaling Technology, Inc. (Danvers, MA). Antibody for V5 (R960-25; 1:3000) were from ThermoFisher Scientific, Inc. (Waltham, MA). Antibody for β-ACTIN (A1978; 1:2000) was purchased from Sigma. The molecular weight (MW) of each protein shown on immunoblot was estimated based on the MagicMark™ XP Western Protein Standard (Life Technologies) on 4–12% or 12% Tris-Glycine Gel (Life Technologies). Representative images of western blots were quantified with Image J software.
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6

Antibodies and Lenvatinib Used in Study

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Antibodies against the following proteins were used: cleaved caspase-3 (#9661), cleaved PARP (#9541), and XIAP (#2042) (Cell Signaling Technology); β-actin (A5441), and TFAM (SAB1401383) (Sigma); LAMP2 (ab18529), OPA1 (ab42364), and APIP (ab98153) (Abcam); NRF2 (sc-13032) (Santa Cruz Biotechnology); and ASCT2 (Proteintech). Lenvatinib was purchased from Shelleckchem.
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7

Protein Extraction and Analysis from Frozen Gastrocnemius

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The gastrocnemius muscles were segregated and placed in liquid nitrogen for rapid freezing. Frozen samples were pulverized and lysed with 500 µl of the RIPA buffer (Beyotime, China). The lysates were ultrasonicated for 6*3 sec on ice and placed on ice for 45 min. Then the lysates were centrifuged at 4,500 g for 15 min at 4°C and the precipitate was discarded. Protein concentrations in the supernatants were determined using the Bradford reagent (Bio-Rad, Hercules, CA). The protein samples (10 µg) were resolved by 10%-12% sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) and transferred onto PVDF membrane (Millipore, Billerica, MA, USA). Finally, immunodetection was performed using an enhanced chemiluminescence detection kit (DW101, TransGen Biotech, Beijing, China), then images were captured by Syngene Bio Imaging (Synoptics, Cambridge, UK). The following primary antibodies were used: HSP75 (10325-1-AP, Proteintech, USA), HSP60 (15282-1-AP, Proteintech, USA), HSP10 (sc-376313, Santa Cruz, USA), LONP1 (15440-1-AP, Proteintech, USA), CHOP (15204-1-AP, Proteintech, USA), ATF4 (sc-200, Santa Cruz, USA), Nrf2 (sc-13032, Santa Cruz, USA), Keap1 (10503-2-AP, Proteintech, USA), Foxo3 (10849-1-AP, Proteintech, USA), SOD1 (10269-1-AP, Proteintech, USA), SOD2 (A1340, Abclonal, USA), UCP2 (11081-1-AP, Proteintech, USA), GAPDH (AC002, Abclonal, USA).
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