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Phosphate buffered saline (pbs)

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PBS (Phosphate-Buffered Saline) is a widely used buffer solution that maintains a physiological pH and ionic balance. It is commonly used in various laboratory applications, including cell culture, immunoassays, and protein purification.

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6 protocols using phosphate buffered saline (pbs)

1

Isolation of Mononuclear Cells from Multiple Myeloma Bone Marrow

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Under sterile conditions, 5 ml bone marrow from patients with multiple myeloma and control group was extracted and added with heparin (1:10). The fresh bone marrow specimens were carefully added on the lymphocyte separation medium. Then it was centrifuged for 10 min, at 1,500 × g. The mononuclear cells in the middle layer were collected. After centrifugation for 10 min at 700 × g, the supernatant was absorbed and then precipitated by 1X PBS (Beckman Coulter, Brea, CA, USA) and washed 3 times to obtain cells.
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2

Anaerobic Fecal Microbiota Isolation

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Fresh feces were aliquoted in a CO2-rich/O2-low atmosphere and stored at −80°C. Then microbiota were isolated by gradient purification under anaerobic conditions, as previously described (Juste et al., 2014 (link)). In brief, a density gradient of Nycodenz solution was prepared. Then, thawed stool was diluted in 1X-PBS (Eurobio), 60% Nycodenz, and 0.03% sodium deoxycholate and loaded on the gradient. After ultracentrifugation (45 min, 14,567 ×g, 4°C; Beckman Coulter ultracentrifuge), fecal bacteria were extracted and washed three times in 1X-PBS and 0.03% sodium deoxycholate and centrifuged. The final bacterial pellet was diluted in 1X-PBS-10% glycerol, immediately frozen in liquid nitrogen, and stored at −80°C.
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3

MDSC Quantification in Hepatocellular Carcinoma

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We collected 4 mL of fasting peripheral venous blood from all HCC patients before GSM–TACE, 10 days after surgery, and 30 days after surgery using heparin anticoagulation tubes. We then added 100 μL whole blood to a dry blank tube, lysed it with 500 μL OptiLyse C Lysing Solution (Beckman Coulter Diagnostics, Brea, California, US), vortexed the solution, and incubated the lysed blood at room temperature for 15 min to assure lysis was complete. Then we added 2 mL phosphate-buffered saline (PBS), and we vortexed and centrifuged the mixture at 300 g for 5 min. After centrifugation, we aspirated the supernatant, resuspended the cell pellet in 500 μL PBS, added 5 μL each of CD14, CD11b, and HLA-DR antibodies, and mixed the solution low speed for 5 s. Finally, we analyzed the samples on a flow cytometer.
2.2.2 Antibodies and laboratory equipment: To determine MDSC frequency, we performed multicolor fluorescence-activated cell sorting analysis using Beckman Coulter CytExpert software version 1.1. We also used a DxFLEX Flow Cytometer (Beckman Coulter), a Labofuge 400R Centrifuge (Thermo Fisher Scientific, Waltham, Massachusetts, US), a LP Vortex Mixer(Thermo Fisher Waltham, Massachusetts, US), and the following anti-human monoclonal antibodies: CD11b-APC-Alexa Fluor 750, CD14-PC7, anti–HLA-DR-ECD, OptiLyse C solution, and PBS (all Beckman Coulter).
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4

Anti-HLA Antibody Quantification

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Serum samples were frozen at -80°C for at least 10 minutes, then thawed at 2-4°C, and brought to room temperature for preparation. Aggregates were removed by centrifugation for 5 minutes at 7400×g. Serum was treated with Adsorb Out Beads (ADSORB, One Lambda) according to the manufacturer's instructions, and EDTA, 0.5 M pH 8.0±0.1, was added to serum in a 1:20 ratio (e.g., 5 μl EDTA to 95 μl serum). Serum dilutions were performed in PBS (Beckman Coulter), and all assays were performed by one technologist. Consecutive samples from each patient were batched to minimize assay variability. Anti-HLA antibody testing was performed using LABScreen Single Antigen HLA class I (catalog LSA1A04, One Lambda) and LABScreen Single Antigen HLA class II (catalog LS2A01, One Lambda), and data were acquired on a LABScan 3D flow analyzer and analyzed in HLA Fusion 4.6 software.
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5

Isolation and Characterization of Extracellular Vesicles

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Prior to harvest the supernatant, cells were grown in all cases in three 75 cm2 tissue culture flasks until 50-60% confluency, then cells were washed 2 times with PBS (Capricorn-Scientific) and cultured in DMEM supplemented with 1% EV-depleted FBS (Biowest) for three days. The collected supernatants were centrifuged at 500 g for 5 minutes to remove floating cells and cell debris. Supernatants were stored at -80°C until further use. On the day of the experiments, the frozen supernatants were thawed slowly, centrifuged at 3,000 g for 15 minutes, and filtered through a 0.2 µm syringe filter unit (Sarstedt). Then the filtered samples were subjected to ultracentrifugation (Beckman L7-55 Ultracentrifuge, TYPE 50.2 Ti rotor) at 100,000 g for 1.5 hours at 4 °C and the pellets (EV) were suspended in 300 µl of PBS and used for treatments on the day of the isolation.
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6

Multicolor Flow Cytometry Analysis of AML

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Peripheral blood from AML patients was placed in an anticoagulant tube containing heparin. Following that, 10 µl of PerCP‐CD34, APC‐CD45, PE‐CD117 FITC‐CD59, and FITC‐FLAER, the FITC‐IgG1 as isotype control antibodies, the specimens were allowed to incubate at 4°C for 30 min. Next, erythrocytes were lysed with 2 ml of erythromycin for 10 min and centrifuged at 400 g for 5 min. After two washes with phosphate‐buffered saline (PBS), the cells were centrifuged at 400 g for 5 min. Before acquisition on FCM, the cells were fixed in 300 µl PBS (106 cells/tube) (Beckman Coulter Inc, US). Kaluza software (Beckman Coulter) was employed for statistical analysis. All antibodies were provided by BD PharMingen company.
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