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Mass hunter software version b 06

Manufactured by Agilent Technologies
Sourced in United States, Finland

Mass Hunter software version B.06.00 is a data analysis software for Agilent mass spectrometry instruments. It provides core functions for data acquisition, processing, and reporting.

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2 protocols using mass hunter software version b 06

1

Comprehensive Metabolite Profiling by QTOF-MS

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Full acquisition MS, auto MS/MS, and targeted MS/MS were performed with a 6540 QTOF Mass Spectrometer in both positive and negative ionization modes. Full acquisition MS spectra were collected over a mass range of m/z 100–1700, and the acquisition rate was 1 Hz at 1000 ms/scan. In the auto MS/MS and targeted MS/MS modes, the precursor MS spectrum was from m/z 100 to 1500, and the acquisition rate was 2 Hz with 500 ms/scan; the MS/MS spectrum was from m/z 50 to 1000, and the acquisition rate was 3 Hz with 333 ms/scan. The conditions of the ESI source were as follows: a drying gas (N2) flow rate of 11 (L/min); a drying gas temperature of 300 °C; a sheath gas temperature of 350 °C; a nebulizer at 40 psi; a capillary voltage of 3.5 kV (negative mode) or 4 kV (positive mode); a fragmentor at 175 V; a skimmer voltage of 60 V; and an octopole RF of 250 V. Every day, prior to the analyses of the samples, the mass axis was calibrated. All of the operations, acquisitions, and analyses of data were controlled by Mass Hunter software version B.06.00 (Agilent Technologies, Santa Clara, CA, USA).
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2

Lipidomic Analysis of Native LDL

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The lipids were extracted 49 from native LDL and isolated extracellular lipoprotein particles, dried under nitrogen flow, and dissolved in chloroform/methanol (1:2). The samples were spiked with a mixture of several quantitative standards, and just before the analysis, 1% (v/v) of NH 3 was added to each sample to support ionization and prevent adduct formation. The mass spectra, indicating all positive ions, all negative ions, or precursors of the ion m/z 184 (a specific fragment for the choline head group), were recorded by an Agilent 6490 Triple Quad LC/MS with iFunnel technology (Agilent Technologies, Santa Clara, CA). The data were further analyzed with MassHunter software version B.06.00, November 2012 (Agilent Technologies) and LIMSA (Somerharju Group, University of Helsinki, Helsinki, Finland) 50 software version 1.0 (Helsinki, Finland), the latter using the standards and a lipid library.
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