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Fluoro jade

Manufactured by Merck Group

Fluoro-Jade is a fluorescent stain used for the detection of neurodegeneration in histological samples. It is a sensitive and specific marker for the identification of degenerating neurons.

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5 protocols using fluoro jade

1

TUNEL and Fluoro-Jade Staining Protocol

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Samples were initially fixed with 4% paraformaldehyde for 10 mins at room temperature. Then, samples were processed with 0.1% Triton X for 5 mins, followed by 5% BSA blocking for 1 hr at room temperature. The slides were then transferred to the TUNEL (Biotium, 30074) working solution for 1 hr at 37 °C and then rinsed. To combine with Fluoro-Jade, the slides were then transferred to the Fluoro-Jade (Sigma, AG325) working solution for 10 mins and then rinsed, air dehydrated, xylene cleared. Nuclei were counterstained with 4,6-diamidino-2-phenylindole (DAPI), and coverslips were placed. Immunostaining images were obtained with a fluorescence microscope (Nikon ECLIPSE Ti-S) or Nikon A1SiR Confocal Microscope.
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2

Fluoro-Jade C Protocol for Neurodegeneration

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The tissue cryostat sections were mounted on Superfrost Plus microscope slides (FisherScientific, 22–230-892) and dried at 50 °C for 30 min. The slides were immersed in the following solutions at room temperature in order: 0.2% NaOH in 80% ethanol for 5 min, 70% ethanol for 2 min, distilled water for 2 min, 0.06% potassium permanganate for 10 min, distilled water for 2 min, 0.0001% Fluoro-Jade C (Sigma-Aldrich, AG325) in 0.1% acetic acid for 10 min and 3 times distilled water for 1 min. The slides were dried at 50 °C for 10 min, immersed in xylene for 1 min and coverslipped with DPX Mounting medium (Millipore Sigma, 06522).
For double labeling, regular Immunofluorescence protocol as described above was performed first, followed by the Fluoro-Jade staining protocol.
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3

Fluoro-Jade C Protocol for Neurodegeneration

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The tissue cryostat sections were mounted on Superfrost Plus microscope slides (FisherScientific, 22–230-892) and dried at 50 °C for 30 min. The slides were immersed in the following solutions at room temperature in order: 0.2% NaOH in 80% ethanol for 5 min, 70% ethanol for 2 min, distilled water for 2 min, 0.06% potassium permanganate for 10 min, distilled water for 2 min, 0.0001% Fluoro-Jade C (Sigma-Aldrich, AG325) in 0.1% acetic acid for 10 min and 3 times distilled water for 1 min. The slides were dried at 50 °C for 10 min, immersed in xylene for 1 min and coverslipped with DPX Mounting medium (Millipore Sigma, 06522).
For double labeling, regular Immunofluorescence protocol as described above was performed first, followed by the Fluoro-Jade staining protocol.
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4

Fluoro-Jade and H&E Staining of DRG and Spinal Cord

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After behavioral testing was complete, all animals were euthanized. Transcardiac perfusion was performed using heparinized saline (4 L), followed by 4% paraformaldehyde (buffered, 5 L). The left L5 DRG, the left dorsal horn innervated by the DRG (DH; T15 to LI in swine), and the left CPN were removed. Samples were embedded in paraffin and then sliced at 5 μm. Fluoro-Jade (Sigma-Aldrich) and H&E staining were done using a modified protocol.31 (link) Samples were imaged using a Zeiss AXIO Imager M2 microscope (×40) with a Hamamatsu Ocra-Flash 4.0 digital camera.
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5

Quantification of Neuronal Loss in I/R

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Neuronal loss was quantified as previously described.101 (link) Briefly, 3 and 6 h after I/R (R3h, R6h), animals were deeply anesthetized and transcardially perfused with 0.9% NaCl saline followed by ice-cold 4% paraformaldehyde in 0.1 M phosphate-buffered saline (PBS). Brain sections (4 µm) were processed for NeuN staining with mouse anti-NeuN (1:1000; Servicebio, GB11138) and reacted with conjugate-absorbed goat anti-rabbit Cy-3 (1:300, Servicebio, GB21303) to determine surviving neurons. The sections were dried overnight for Fluoro-Jade (Sigma-Aldrich), which selectively stains degenerating neurons. The slides were immersed for 3 min in 100% ethanol, for 1 min in 70% ethanol, for 1 min in distilled water, and then transferred to a solution containing 0.01% Fluoro-Jade and 0.1% acetic acid (1:10) for 30 min on a shaker. After three 10-min washes, the slides were finally coverslipped. Labeled sections were imaged with a confocal laser-scanning microscope (Nikon ECLIPSE Ti-S). The number of cells in each section was divided by the area sampled, which was determined using imaging probes.
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