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3 protocols using 5 bromo 4 chloro 3 indolyl β d galactoside x gal

1

Senescence-Associated β-Galactosidase Assay and Oil Red O Staining

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SA-β-gal activity was examined as described previously9 (link). Briefly, cells were fixed with 0.25% Glutaraldehyde in PBS at room temperature for 15 min, then washed with PBS 1 time, followed by incubation for 1–2 h at 37 °C in β-gal staining solution containing 1 mg ml–1 5-bromo-4 chloro-3-indolyl-β-D-galactoside (X-gal, Takara), 5 mmol l–1 potassium ferrocyanide, 5 mmol l–1 potassium ferricyanide, 150 mmol l–1 NaCl, 2 mmol l–1 MgCl2, 0.01% sodium deoxycholate, and 0.02% Nonidet P-40. Then the stained cells were taken 5 photomicrographs with BZ-9000 or BZ-X810 (Keyence). Quantification of SA-β-gal activity was performed with the ImageJ program (version 1.53a). Atherosclerotic plaque was estimated by assessing sections with Oil Red O staining. Briefly, whole aortas were dissected to remove adventitial fat, opened, and pinned flat for fixing in 4% paraformaldehyde for 12 h at room temperature. Then the pinned aortas were washed for 1 min with 60% isopropyl alcohol and incubated in 0.5% Oil Red O solution (Sigma-Aldrich) in 60% isopropyl alcohol) for 15 min at 37 °C for staining. Subsequently, the samples were briefly immersed in 60% isopropyl alcohol solution and then washed with double distilled water. After the Oil Red O-stained specimens were photographed, quantification of the plaque area was done with ImageJ.
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2

Efficient Biochemical Detection Reagents

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5‐bromo‐4‐chloro‐3‐indolyl‐β‐d‐galactoside (X‐gal) was from Takara Bio. The stock solution contained 20 mg ml−1 X‐gal in N, N‐dimethylformamide. Phos‐tag acrylamide AAL‐107 was purchased from Wako Pure Chemical. The stock solution contained 5.0 mM Phos‐tag acrylamide AAL‐107 in 3% (v/v) methanol. Bis(2‐hydroxyethyl)iminotris(hydroxymethyl)methane (Bis‐Tris) was from Wako Pure Chemical. Other chemicals were purchased from Sigma‐Aldrich, Wako Pure Chemical, Nacalai Tesque, and BD.
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3

Recombinant Protein Expression and Purification

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The TIANprep Midi Plasmid Kit was used for plasmid or genomic DNA extractions and the E com BL21 (DE3) Chemically Competent Cell was the host-expressing cell; the Uniclone One Step Seamless Cloning Kit recombinant plasmid construction kit and the total RNA Extraction Kit were purchased from Genesand company. T4 DNA Ligase, BamH I restriction endonuclease, and other reagents were used to construct the expression vectors. Kanamycin (30 mg/mL), ampicillin (10 mg/mL), 5-Bromo-4-chloro-3-indolyl β-Dgalactoside (X-Gal), and Isopropyl β-D-Thiogalactoside (IPTG) solutions were purchased from TaKaRa and used as the recombinant strain selection medium. The Mag-Beads His-Tag protein puri cation beads were used for the puri cation of the His-Tag target protein, and the target protein concentration was determined by BCA Protein Assay Kit. Western blot analysis was performed on the target protein (PvdQ enzyme). Anti-6 His-Tag mouse monoclonal antibody was used as the primary antibody, HRP-conjugated rabbit anti-mouse IgG was the second antibody, and the EasyBlot ECL kit was used to observe the color reaction. The AHL standard reagents were purchased from Sigma (C4-HSL, C6-HSL, C8-HSL, 3-HSL, 3oxo-C8-HSL, C10-HSL, 3-oxo-C10-HSL, C12-HSL, C14-HSL, 3-oxo-C14-HSL) and dissolved with methanol (HPLC grade, 99.9%), sealed, and stored at -20°C.
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