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79 protocols using coumaric acid

1

Phenolics Extraction and Quantification from Algae

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For total phenolics extraction from algae and subsequent quantification, aliquots of algal cultures containing about 120 × 106 cells were harvested by centrifugation (600× g, 10 min) and stored at −20 °C until extraction. For the preparation of extracts, algal biomass was mixed with methanol and then exposed to mechanical rupture as follows: 15 min of continuous vortexing, followed by 30 min in an ultrasound bath, and finally, further 10 min-long vortexing ([75 (link)], with modifications). Then, samples were centrifugated (1500× g, 10 min), and the supernatants were harvested for the quantification with the Folin–Ciocalteu reaction described in [75 (link)]. Briefly, 100 µL of samples were left to react for 5 min with 750 µL of Folin–Ciocalteu reagent (Merck, Darmstadt, Germany; 1:10 in distilled water); then, the mixture was added with 750 µL of Na2CO3 (60 gL−1) and let incubate for 1.5 h at RT. The mixtures were measured at 725 nm using the same Pharmacia spectrophotometer described above. The total phenolics concentration of the methanolic extracts was calculated on the basis of a calibration curve prepared using coumaric acid (Sigma Chemicals Co., St. Louis, MO, USA) as the standard and was expressed as mg equivalents of coumaric acid over total DW of algae cultures (mgCoum.Ac.Eq. gDW−1) [76 (link)].
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2

UHPLC-DAD Protocol for Phenolic Compound Quantification

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The phenolic compounds were identified and quantified using ultra-high-efficiency liquid chromatography (UHPLC) coupled to a diode array detector (DAD) with wavelength monitoring between 200 and 800 nm. A Shimadzu Shim-pack XR-ODS column (Shimadzu, Kyoto, Japan) with a particle size of 2.2 µm and a particle size of 2 mm × 75 mm was used. The injection rate employed was 2 µL with a 0.4 mL/min flow rate. The gradient used consisted of (A) water with 0.1% acetic acid (v/v) and (B) acetonitrile with 0.1% acetic acid (v/v). Identification was performed using analytical standards (3,4-hydroxycinnamic acid, catechin, gallic acid, ferulic acid, coumaric acid, maleic acid, rutin, quercertin, apigenin, and vanillin) obtained from Merck (Darmstadt, Germany) A curve was developed with the analytical standards at concentrations between 1 and 1000 µg/mL for quantification.
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3

Phenolic Compounds: Analytical Standards

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Cyanidin, peonidin 3-o-glucoside, malvidin-3-o-glucoside, quercetin, quercetin 3-o-glucoside, coumaric acid, gallic acid, syringic acid, epicatechin, catechin, and kaempferol (all analytical standard) were from Merck (Milan, Italy). Methanol, ethanol, and acetonitrile (all LC/MS grade solvents), ortophospforic acid 85%, Folin–Ciocalteu reagent and sodium carbonate were bought from Carlo Erba (Milan, Italy). Water was purified through a Milli-Q system from Millipore (conductivity: 18.2 MΩ cm at 25 °C; Milford, MA, USA).
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4

Extraction and Analysis of Polyphenols

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Methanol, acetonitrile (all HPLC grade), and formic acid (50%, LC–MS grade) were purchased from Sigma–Aldrich (Milan, Italy). Ultrapure water (18.2 MΩ cm at 25 °C) was obtained by ELGA PURELAB Ultra system (M-medical, Cornaredo, Milan, Italy). Anthocyanins (Cyanidin-3-O-glucoside and Peonidin-3-O-glucoside) were obtained from LGC Standard srl (Sesto San Giovanni, Milan, Italy). All the other polyphenol reference compounds (gallic acid, protocatechuic acid, p-hydroxybenzoic acid, vanillic acid, coumaric acid, ferulic acid, catechin, myricetin), chemicals, and reagents were of analytical grade and purchased from Merck KGaA (Darmstadt, Germany).
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5

Phenolic and Flavonoid Profiling by HPLC

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The principal flavonoids and phenolic compounds were detected and identified using an Agilent 1260 series HPLC system with an Eclipse C18 column (4.6 mm × 250 mm i.d., 5 μm) and water (A) and 0.05% trifluoroacetic acid in acetonitrile (B) as the mobile phase at a flow rate of 1 ml/min. The mobile phase elution linear gradient was used as follows: 0 min (82% A:18% B); 0–5 min (80% A:20% B); 5–8 min (60% A:40% B); 8–12 min (60% A:40% B); and 12–20 min (82% A:18% B). The multi-wavelength detector used was monitored at a wavelength of 280 nm. The injection volume for each sample was 5 μl and the column temperature was maintained at 40°C. Each sample’s phenolic and flavonoid composition was determined by comparing their retention times and spectral reference data with the external standard controls. All standards, namely gallic acid, chlorogenic acid, catechin, methyl gallate, caffeic acid, syringic acid, pyrocatechol, rutin, ellagic acid, coumaric acid, vanillin, ferulic acid, naringenin, querectin, cinnamic acid, kaempferol, and hesperetin were purchased from Sigma-Aldrich (Khalil et al., 2020 (link); Abdel-Aziz et al., 2021 (link)).
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6

Comprehensive Chemical Inventory for Scientific Research

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All the required chemicals including chloride (FeCl3), Sodium hydroxide (NaOH), nitric acid (HNO3), iron hydrochloric acid, Folin-Ciocalteu, sodium carbonate (Na2CO3), glibenclamide, 2, 2-diphenyl 1-picrylhydrazyl, potassium ferricyanide, phosphate buffer, and aluminum trichloride (AlCl3) were procured from the Sigma Aldrich Company based in St. Louis, MO, USA. Analytical grade chemicals and reagents were utilized in this study except for pure methanol, ethanol, quercetin, vanillin, hydrochloric acid, acetic acid, acetonitrile, tannic acid, caffeine acid, gallic acid, ascorbic acid, rosmarinic acid, coumaric acid, quercetin, rutin, apigenin, catechin, catechol, naringenin, L-Hystidine, Mueller-Hinton, Sabouraud gel, and D-glucose, which were procured from Sigma-Aldrich in Steinheim, Germany.
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7

Comprehensive Phytochemical Analysis Protocol

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Standards quinic acid (1), caffeic acid (2), gallic acid (4), vanillic acid (5), catechin (7), epicatechin (9), ferulic acid (13), chrysin (15), rutin (16), quercetin-3,4′-di-O-glucoside (26), kaempferol-3-O-rutinoside (28), ellagic acid (35), coumaric acid (37), eriodictyol (39), methy-O-ellagic acid (42), protocatechuic acid (44), quercetin (45), luteolin (46), kaempferol (48) betulinic acid (50) and oleanolic acid (51) were purchased from Sigma-Aldrich (St. Louis, MO, USA) (Fig. 1). LC–MS grade solvents (acetonitrile methanol and formic acid) were also purchased from Sigma–Aldrich (St. Louis, MO, USA) and used throughout the study. Ultra-pure water was produced by Milli-Q Advantage system (Millipore, Milford, MA, USA). AR grade ethanol (Merck, Darmstadt, Germany) was used in the preparation of the ethanolic extracts.

Chemical structures of standard compounds.

Fig. 1.
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8

Phytochemical Profiling and Antioxidant Assays

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GA, chlorogenic acid (ClA), caffeic acid, syringic acid, coumaric acid, ferulic acid (FA), ellagic acid, cinnamic acid, catechol, myricetin, quercetin, kaempferol, apigenin, 2,2-diphenyl-1-picrylhydrazyl (DPPH), 2,2’-azino-bis(3-ethylbenzothiazoline-6-sulphonic acid) (ABTS), sodium carbonate, aluminum chloride, potassium acetate and all other chemicals and biochemicals unless otherwise noted were from Sigma (St. Louis, MO, USA). All the positive controls used were of high-performance liquid chromatography (HPLC) grade. Folin Ciocalteau reagent, Methanol and acetic acid of HPLC grade were supplied by Merck, Germany. All other chemicals used were of the standard analytical grade.
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9

Antioxidant Capacity Evaluation Methods

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Quercetin, rutin, ferulic acid, coumaric acid, pinocembrin, DPPH (2,2-diphenyl-1-picrylhydrazyl), ABTS (2,2′-azino-bis (3-ethylbenzothiazoline-6-sulfphonic acid), TPTZ (2,4,6-tris(2-pyridyl)-s-triazine), Folin–Ciocalteu phenol reagents, Trolox, β-carotene/linoleic acid, 1,2-Bis(dimethylamino)ethane (TEMED), ethylenediamine tetraacetic acid (EDTA) and streptozotocin (STZ) were obtained from Sigma-Aldrich (St. Louis, MO, USA).
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10

HPLC-MS/MS Analysis of Polyphenol Compounds

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All of the solvents, salts, acids and bases were of analytical grade and were purchased from Sigma-Aldrich-Merck (Darmstadt, Germany) or Carlo Erba (Milan, Italy). (Poly)phenol standards used for identification and quantification purposes with HPLC-MS/MS were as follows: protocatechuic acid, gallic acid, (+)-gallocatechin, (−)-epigallocatechin, caftaric acid, (+)-catechin, (−)-epicatechin, trans-coutaric acid, astringin, trans-fertaric acid, 2,6-dihydroxybenzoic acid, 4-hydroxybenzoic acid, chlorogenic acid, caffeic acid, vanillic acid, rutin, piceid, coumaric acid, sinapic acid, ferulic acid, luteolin, quercetin, apigenin, kaempferol, procyanidin B1 (Sigma-Aldrich-Merck, Darmstadt, Germany) and procyanidin B2 (Extrasynthese, Genay Cedex, France).
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