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19 protocols using cxcl13

1

Quantifying Chemokine-Driven B Cell Migration

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Spleen cells were first plated on petri-dishes at 37°C for 30 minutes to deplete macrophages. Non-adherent cells were then re-suspended in RPMI + 10% FBS at a density of 5 x106 cells/ml. CXCL13 (Peprotech) diluted in 600 μl RPMI/0.5% BSA (final concentration 800ng/ml) was added to the bottom of each well of a 24 well plate. One hundred micro liters of spleen cells were added to a 5nm pore size transwell (Corning), then placed on the top of the well. After a 4 hour incubation at 37°C, migrated cells were collected from the bottom and enumerated by flow cytometry. MZ B cells and follicle B cells were distinguished by their expression of CD21 and CD23.
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2

Chemokine-induced Cell Migration Assay

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Following 1 h pre-treatment with DMSO, SRX3305, or ibrutinib, MEC-1 cells were placed onto 5-micron trans-well inserts (Corning, Tewksbury, MA, USA) resting in wells containing 200 ng/mL CXCL-12 or 1000 ng/mL CXCL-13 (PeproTech, Cranbury, NJ, USA). No chemokine control wells were included for each treatment condition. After incubating for 6 h, trans-well inserts were carefully removed, and the number of cells that migrated through the insert towards the chemokines were counted by flow cytometry. Data were analyzed using NovoExpress software (ACEA Biosciences Inc., San Diego, CA, USA).
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3

B Cell Migration Assay Protocol

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Fo B cells purified by magnetic-activated cell sorting were activated with 5 µg/ml goat anti–mouse IgM (Jackson ImmunoResearch) for 24 h or rested overnight (unstimulated control). Various dilutions of recombinant mouse CCL21 (provided by the late I. Clark-Lewis) or CXCL13 (PeproTech) in 150 µl chemotaxis buffer (RPMI-1640 with 0.5% BSA and 20 mM Hepes) were added to the lower chambers of Transwell chemotaxis plates (96-well, 5-µm pore size; Corning). Cells were extensively washed in chemotaxis buffer and loaded into the upper chambers at 105 cells/well in 50 µl chemotaxis buffer and incubated for 3 h at 37°C. To enumerate B cell migration, cells were harvested from the bottom chambers, and B220+ cells were assessed by flow cytometry using a defined number of CaliBRITE beads (BD) as an internal reference. The migration index was calculated as described (Kara et al., 2013 (link)).
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4

Quantitative Chemotaxis Assay Protocol

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Chemotaxis assays were performed using 106 BM or spleen cells incubated for 30 min with 1× DMEM containing 0.5% fatty acid–free BSA (EMD Biosciences), 5% of antibiotics, l-glutamine (Cellgro), and Hepes. Cells were then allowed to migrate through 5-µm-pore–sized transwells (Corning) toward soluble CXCL12 (R&D Systems), 2-AG (Cayman), or CXCL13 (PeproTech) for 3 h at 37°C. Cells were collected, stained, and resuspended in 40 ml of staining buffer and analyzed by flow cytometry for 40 s.
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5

Ex vivo Chemotaxis Assay Protocol

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Ex vivo chemotaxis assays were performed as described previously (33 (link), 95 (link)). Briefly, MLN cells in RPMI medium with 5% fetal calf serum (Invitrogen) were placed in the upper chamber of a 5-μm Transwell insert in a 24-well plate (Corning, Corning, NY). The lower chamber contained 200 ng of either CXCL13 or CCL21 (Peprotech, London, UK)/ml. Five technical replicates were performed. After 24 h, the upper chamber was discarded, and the cells in the lower chamber were collected and immunostained with anti-CD3 (clone 17A2) to detect T cells, anti-B220 (clone RA3-2GB) to detect B cells, and anti-CD11c (clone N418; BioLegend, London, UK) and resuspended in 500 μl of fluorescence-activated cell sorting buffer. The number of migrated cells was counted for 60 s using a LSRFortessa flow cytometer (BD Biosciences).
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6

Intravital Imaging of Lymph Node B Cell Recruitment

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WT host mice were anesthetized by intraperitoneal injection of xylazine (12.5 mg/kg) and ketamine hydrochloride (125 mg/kg) (Sanofi, Mexico-City, Mexico). The inguinal lymph node was then inoculated with 100 μl CXCL13 (25 ng/ml) (PeproTech) to promote cell recruitment. One hour later, 1 × 107 Hoechst 33342-labeled, LPS + IL-4 activated B cells were injected via the cannulated carotid artery. Venules of the inguinal lymph node were recorded using an intravital upright microscope (Axioscope, Model A1, Zeiss, Jena, Germany) with a 40 × and 0.75 saline immersion objective (Zeiss). Videos and images were analyzed using ImageJ (NIH, Bethesda, MD. USA) and Zen Blue Edition 2.5 software (Zeiss, Microscopy). The venules' diameter, the number of adherent cells, the number of transmigrated cells, and the cells' velocity were measured using ImageJ. Cell flux, blood flow, and rolling velocity were analyzed by Zen Blue Edition 2.5 software (Zeiss, Microscopy). This methodology was carried out following a previously published protocol32 .
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7

Transwell Migration Assay for Regulatory T Cells

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FACS-sorted GFP+RFP+ retrovirally transduced Treg cells (3.0×105) were rested at 37°C for 2 hours in complete RPMI media. Cells were placed in the upper chamber [(Corning, Corning, NY, USA), Polycarbonate, 6.5 mm diameter, 5 μm pore size] containing 100 μl of complete RPMI media. The lower chamber was filled with 600 μl complete RPMI media containing various concentrations of CXCL13 (PeproTech, Rocky Hill, NJ, USA). After 4 hours of incubation, cells from the lower chamber were collected and the cell count was determined by running samples at a fixed flow rate (60 μl/min) for 1 min by FACS Calibur (BD Bioscience, San Jose, CA, USA). Migration index was calculated as follows: ((number of migrated cells/number of input cells)*100).
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8

In vitro Chemotaxis Assay for T Cell Subsets

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For in vitro chemotaxis assays 75 x 103 CXCR5-CD25-CD127+CD4+ conventional T cells, CXCR5+CD25-CD127+CD4+ Tfh cells, CXCR5-CD25+CD127-CD4+ Tregs cells and CXCR5+CD25+CD127-CD4+ Tregs cells were loaded on top wells of HTS Transwell 96-well permeable supports (5μm pore size) (Corning). Plain RPMI medium (RPMI 1640, Life Technologies) or that supplemented with 0.2μg/mL CXCL13 (Peprotech) was added to the bottom wells of the plate. After 4 hours of incubation (37.°C, 5% CO2), filters were removed and cells that migrated to the lower chamber were counted in a LSR Fortessa instrument (BD Biosciences) and further analyzed with FlowJo v10 software (TreeStar). Chemotaxis index was calculated as the ratio of cells migrating toward CXCL13 and cells randomly migrating.
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9

ICOS and CXCL13 Signaling in T Cells

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Previously activated or retrovirally transduced T cells were deprived of serum for 3 h. Approximately 2 × 106 T cells were suspended in serum-free RPMI-1640 medium, incubated with purified anti-ICOS (Biolegend) or CXCL13 (PeproTech) with or without PD-L1-Fc (R&D) of indicated concentration for 30 min in 37°C. Stimulated cells were quickly spun down and lysed by 2% SDS and loading buffer and then boiled at 100 °C for 15 min. Proteins were separated by SDS-PAGE and transferred to PVDF membranes. Membranes were blocked with TBS containing 5% milk and 0.1% Tween-20. Antibodies for immunoblotting included rabbit anti–pAKT (S473), anti-AKT, anti-actin, anti-pSHP-2 (Y542), anti-SHP2 (Cell Signaling Technology). Appropriate HRP-conjugated secondary reagents were from Jackson Immunoresearch Laboratories.
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10

Reconstitution of Chemokine Ligands

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The human chemokines CCL1, CCL5, CCL7, CCL11, CCL17, CCL19, CCL20, CCL25, CCL27, CXCL8, CXCL11, CXCL12, CXCL13, CXCL16, and CX3CL1 were purchased from PeproTech, whereas XCL1 was purchased from R&D Systems. All chemokines were reconstituted in a buffer containing 0.1% (w/v) bovine serum albumin (BSA) and 1 mM acetic acid.
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