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27 protocols using ecl chemiluminescence

1

Whole-Cell Lysate Preparation and Immunoblotting

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Whole-cell lysates were prepared from fracture callus tissues or C2C12 cells, an osteoblast/myoblast precursor cell line that was purchased from ATCC (Manassas, Virginia). Homogenised fracture callus tissues with liquid nitrogen or cells were lysed with mammalian protein extraction reagent (Pierce Chemical, Dallas, Texas) containing a protease inhibitor mixture (Roche Applied Science, Indianapolis, Indiana). Whole cell lysates (10 μg protein/lane) were loaded in 10% Sodium Dodecyl Sulfate (SDS)-PAGE gels, transferred to a nitrocellulose membrane, and immunoblotted with antibodies to β-actin, ubiquitin (Santa Cruz Biotechnology) and Itch (BD Biosciences, San Jose, California). Bands were visualized using ECL chemiluminescence (Amersham Biosciences, Piscataway, New Jersey).
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2

VEGF-C Expression Analysis by Western Blot

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Whole cell lysates were harvested and samples (30μg protein/lane) were fractionated by SDS–PAGE and transferred to nitrocellulose membranes. Immunoblotting was carried out using antibodies to VEGF-C (Abcam, Cambridge, UK, Cat#ab191274) at dilution 1:100, and β-actin (Sigma-Aldrich Corp, cat. #A2228; lot. #052M4816V) at dilution 1:5000. Bands were visualized using ECL chemiluminescence (Amersham). All experiments were done in triplicate.
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3

Quantifying Dystrophin Protein Levels

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Protein samples from diagnostic biopsies were separated by SDS-PAGE on 3–8% gradient Tris-glycine gel, and transferred for 5 hours onto a nitrocellulose membrane. We used a primary monoclonal antibody against the dystrophin C-terminus. Visualization on X-ray films was performed by ECL-chemiluminescence (Amersham). Adult male control samples were loaded in the same gel to determine relative abundance. Dystrophin quantity was determined by densitometry of dystrophin bands (ImageJ software), normalized to myosin bands in the post-transfer Coomassie blue stained gels, with subtraction of background.
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4

VEGFR-2 Immunoprecipitation and Western Blot Analysis

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Cells were lysed in RIPA buffer (50 mM Tris-HCl (pH 7.4), 1% Nonidet P-40, 0.25% sodium deoxycholote, 150 mM NaCl, 1 mM EDTA, 1 mM NaF, and proteinase inhibitor cocktail). A total of 200 μg of cell lysate and 10 μl rabbit monoclonal anti-VEGFR-2 antibody (no.2749, Cell Signaling Technology; 1:100 dilution) were incubated in a shaker at 4 °C overnight. After 2 h of incubation with 25 μl of protein A/G ultraLink Resin (Thermo Scientific) at 4 °C, the beads were washed three times with PBS then boiled in SDS-PAGE sample buffer for 5 min to elute proteins for subsequent Western blotting for VEGF R2. For Western blotting, the proteins from placental tissue or first trimester HTR8 trophoblast cell lysates were separated on 12% SDS–polyacrylamide gels and blotted onto PVDF membranes and probed with anti-mouse antibodies for VEGF A, VEGF C, Dll4 (Abcam), Hey 2 and β-actin (Biovision). We used ECL chemiluminescence (Amersham Biosciences) to visualize the bands and recorded them using Konica SRX 101 A developer.
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5

Western Blot Analysis of Cultured MDDCs

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Cultured MDDCs (1×106) were suspended in a lysis buffer containing 20 mM Tris-HCl (pH 7.4), 50 mM NaCl, 1% Triton X-100, and protease inhibitors. The lysates were then subjected to sodium dodecyl sulfate-polyacrylamide (SDS) gel electrophoresis, after which they were transferred to nitrocellulose membranes that were blocked for 1 hour at 25°C with a blocking buffer and then incubated with primary Abs in blocking buffer overnight at 4°C. The samples were treated with secondary Abs in a blocking buffer. Signals were detected by ECL chemiluminescence (Amersham, Uppsala, Sweden).
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6

Quantification of Kidney Proteins

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Purified hPTHrP1-34 and 1-84 and proteins extracted from kidney were quantitated by a kit (Bio-Rad, Mississauga, Ontario, Canada). Thirty µg protein samples were fractionated by SDS-PAGE and transferred to nitrocellulose membranes. Immunoblotting was carried out as described [22] (link) using antibodies against PTHrP1-34, TRPV5 (ECaC1), calbindin-D9K and calbindin-D28K, Na+/Ca2+ exchanger 1 (NCX1), and β-tubulin (Santa Cruz, CA, USA). Bands were visualized using ECL chemiluminescence (Amersham) and quantitated by Scion Image Beta 4.02 (Scion Corporation, NIH).
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7

Protein Expression Profiling of Mandibles

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Proteins were extracted from mandibles and quantitated using a protein assay kit (Bio‐Rad, Mississauga, Ontario, Canada). Protein samples (20 μg) were fractionated by SDS‐PAGE and transferred to nitrocellulose membranes. Immunoblotting was carried out as described19 using antibodies against Cyclin D (1:300, sc‐8396, Santa Cruz), CDK4 (1:300, sc‐23896, Santa Cruz), p27 (1:500, sc‐1641, Santa Cruz), p53 (1:500, sc‐126, Santa Cruz) and β‐actin (1:1000, AP0714, Bioworld Technology). Bands were visualized using ECL chemiluminescence (Amersham) and quantitated by Scion Image Beta 4.02 (Scion Corporation, NIH).
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8

GDF15 Protein Expression Analysis

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Equal amounts of total cell lysate proteins were loaded, separated by 10% SDS-PAGE, and transferred to polyvinylidene difluoride membranes. Membranes were incubated with primary antibodies against GDF15 (Santa Cruz Biotechnology, Santa Cruz, CA, USA) for 1 h and subsequently with horseradish peroxidase-conjugated secondary antibodies for 1 h. Band densities were detected by ECL chemiluminescence (Amersham Biosciences, Buchs, Switzerland) as described by the manufacturer. Tubulin (Cell Signaling Technology, Beverly, MA, USA) was used as an internal control. Images were scanned with a master imager (Microtek ScanMaker 9800XL, Shanghai, China) and semi-quantified with Photoshop 7.0 (Adobe, San Jose, CA, USA).
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9

Renal Protein Expression Analysis

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Renal lysates were subjected to Western blot analysis as previously described [21 (link),31 (link)]. Briefly, kidney samples were homogenized in ice cold modified RIPA buffer supplemented with inhibitors for proteases and phosphatases. Protein concentrations were determined by standard Bradford assay (Bio-Rad, Hercules, CA) using bovine serum albumin as the standard. Kidney protein samples (30–50 µg) were separated by SDS-PAGE then transferred onto a nitrocellulose membrane and incubated with primary antibodies. Antibodies for adenosine kinase, eNOS, adenosine A1 and A2A (Santa Cruz Biotechnology, Santa Cruz, CA) and β-actin (Sigma) were detected with a horseradish peroxidase-conjugated antibody and ECL chemiluminescence (Amersham BioSciences, Buckinghamshire, UK). Intensity of immunoreactivity was measured by densitometry and β-actin was used to verify equal protein loading (n=6/group).
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10

Immunoblotting Analysis of p53 in Fanconi Anemia

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Equal numbers of Lin cells isolated from Fanca−/−, Fancc−/−, or their WT littermates were washed with ice-old PBS, and resuspended in an ice-cold lysis buffer containing 50mM Tris-HCL (pH7.4), 0.1% NP40, and 1M NaCl supplemented with protease and phosphatase inhibitors (10 μg/ml of aprotinin, 25 μg/ml of leupeptin, 10 μg/mlof pepstatin A, 2mM PMSF, 0.1M NaP2O4, 25mM NaF, and 2mM sodium orthovanadate) for 30 minutes on ice. Cell debris was removed from the lysate by centrifuging them at 16873g for 30 minutes at 4°C. Protein lysate was resolved on SDS-PAGE and transferred onto nitrocellulose membranes. Immunoblots were then incubated with primary antibodies for total p53 (Clone PAb240; Calbiochem), p53-S18 (Clone ab1431; Abcam), and β-actin (Sigma-Aldrich) for 12–16 hours at 4°C. Signals were visualized by incubation with anti-mouse secondary antibody, followed by ECL chemiluminescence (Amersham Biosciences).
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