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43 protocols using na k atpase

1

Antibody Characterization and Applications

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The following antibodies were from Sigma: anti-hemagglutinin (HA)-tag (H3663; 1:1,000 IB), anti- FLAG-tag (F1804; 1:1,000 IB, 2 μg IP), and anti-Myc-tag (M4439; 1:1,000 IB, 2 μg IP). The following antibodies were from Cell Signaling Technology: non-phosphor (active) β-catenin (#8814; 1:100 IHC), Axin2 (#2151; 1:1,000 IB), β-TrCP (#4394; 1:1,000 IB), PKCδ (#2058; 1:1,000 IB), and phosphor-PKCδ (Ser643/676) (#9376; 1:1,000 IB). The following antibodies were from Santa Cruz Biotechnology: β-catenin (sc-7963; 1:1,000 IB, 2 μg IP), PKCδ (sc-937; 1:100 IF), Lamin B (sc-6216; 1:1,000 IB), tubulin (sc-8035; 1:1,000 IB), normal rabbit IgG (sc-2345; 2 μg IP), normal mouse IgG (sc-2025; 2 μg IP), β-actin (sc-47778; 1:10,000 IB), GST (sc-138; 1:1,000 IB), GSK-3β (sc-9166; 1:1,000 IB) and Cyclin D1 (sc-753; 1:1,000 IB). The following antibodies were from Bethyl Laboratories: TRIM33 (A301-060A; 1:1,000 IB, 2 μg IP), TRIM33 (IHC-00216; 1:100 IHC). The following antibody was from BD Transduction Laboratories: β-catenin (610153; 1:100 IF). The following antibody was from Abcam: Na-K-ATPase (ab76020; 1:1,000 IB). The phosphor-Ser715 β-catenin antibody (1:1,000 IB; 1:100 IHC) was produced by Signalway Antibody (College Park, MD).
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2

Immunoblotting of Flag, GAPDH, and Na+/K+-ATPase

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After the indicated transfection, HEK293 cells were rapidly washed with ice-cold phosphate-buffered saline (PBS). The total proteins were extracted using RIPA Lysis Solution (Beyotime, China) and the protein concentration was quantified by the BCA kit (Beyotime, China). A total of 30 μg of total protein was fractionated in 8% polyacrylamide gel and then transferred to nitrocellulose membranes. Membranes were then blocked with tris buffered saline (TBS) with Tween-20 (TBST) containing 5% skim milk at room temperature for 1 h to block non-specific binding sites. The primary antibody against Flag (1: 3,000, Sigma Aldrich, St. Louis, MO, USA), GAPDH (1: 3,000, ProTech, Chicago, IL, USA), or Na+/K+-ATPase (1:1,000, Abcam, Cambridge, MA, USA) was incubated overnight at 4°C and then washed with TBST. The horseradish peroxidase (HRP)-labeled secondary antibody incubation was then performed at room temperature for 1 h. Antibody binding was determined by chemiluminescence reaction. Target bands were quantified using Image J software (NIH, Bethesda, MD, USA).
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3

Immunofluorescence Staining of Cultured Cells

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Cultured cells were first washed with PBS containing Ca and Mg. Afterwards, cells were fixed using Cytofix (BD Biosciences, Franklin Lakes, NJ, USA). Permeabilization was performed using 10% donkey serum (Millipore, Burlington, MA, USA) diluted in Perm/Wash buffer (BD). Primary antibody incubation with NPHS2, SLC22A2, LRP2, Na/K-ATPase (all obtained from Abcam, Cambridge, UK), PAX2 (Life Technologies, Carlsbad, CA, USA), LHX1, AQP1, AQP2 and SLC12A3 (all obtained from Novus Biologicals, Centennial, CO, USA) occurred overnight at 4 degrees (antibody details described in Table S1). After washing three times with Perm/Wash, incubation with fluorescent-labeled secondary antibodies (Thermo Fisher Scientific) was performed in the dark at room temperature. Cells were washed again three times before the final staining of the nuclei using 4′,6-diamidin-2-phenylindol (DAPI, Sigma-Aldrich). Afterwards, DAPI solution was replaced finally with PBS with Ca and Mg. Control samples subjected to the staining procedure, including secondary antibody incubation but excluding primary antibody incubation, were used to assess the specificity of primary antibodies and for background subtraction. Cell images were obtained using the Opera Phenix High Content Screening device (PerkinElmer, Waltham, MA, USA) and final analysis was performed using Columbus Software (version 2.9, PerkinElmer).
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4

Subcellular Fractionation and Immunoblotting

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Subcellular heart protein lysates of membrane, cytoplasmic and nuclear extracts were prepared using the Subcellular Protein Fractionation kit for tissues (Thermo Scientific, Pierce Biotechnology, Rockford, IL). Equal amounts of proteins (30 μg) were resolved by 10% SDS–PAGE and semi-dry transferred to nitrocellulose membranes (BIO-Rad), which undergone blocking for 2 hrs with Odyssey Blocking Buffer (LI-COR Biosciences, Lincoln, NE), then probed overnight at 4°C with a mixture of ERα (1:500, Abcam, Cambridge, MA), NA/K ATPase (1:2000, Abcam, Cambridge, MA), β-actin (1:5000, Abcam), and Laminin B (1:2000, Santa Cruz Biotechnology, Santa Cruz, CA) antibody, respectively. The membranes were then incubated for 60 min with a mixture containing IRDye680-conjugated goat anti-mouse and IRDye800-conjugated goat anti-rabbit (1:15,000, LI-COR Biosciences). Bands were detected by Odyssey Infrared Imager and quantified by integrated intensities with Odyssey application software version 5.2 (LI-COR Biosciences).
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5

Immunostaining and Histochemical Analysis of Mouse Corneas

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Corneas of mice were dissected under a binocular microscope and fixed with 4% PFA (P0099; Beyotime) for 1 hour. Then, mouse corneas were permeabilized with 0.1% Triton X-100 (P0096; Beyotime) in PBS for 5 minutes and blocked in 3% bovine serum albumin (BSA) in PBS for 30 minutes. Subsequently, anti-zonula occludens-1 (ZO-1) antibody (40-2200; Invitrogen) and anti-sodium potassium ATPase (Na+-K+-ATPase) antibody (Ab76020; Abcam) in 1% BSA-PBS was used to incubate the corneal cups at 4°C overnight, respectively. After that, secondary anti-rabbit fluorescein isothiocyanate (FITC; ab150077; Abcam) was applied to conduct the secondary antibody incubation. Corneal cups were flattened by four radial cuts and mounted by DAPI mounting medium (0100-20; Southern Biotech). The graphs of ZO-1 and Na+-K+-ATPase staining were captured using the laser confocal scanning microscope (Leica SP8; Wetzlar, Germany).
For periodic acid–Schiff (PAS) staining, paraffin tissue slices of mouse corneas were dewaxed and oxidized by 0.5% periodate acid solution. Then, corneal slices were stained in PAS reagent in the dark for 30 minutes. Subsequently, nuclear dying using hematoxylin, dehydration, and slice seal were performed. The images of PAS staining were obtained using an optical microscope.
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6

Biochemical and Oxidative Stress Analysis

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Analytical-grade sodium chloride, DMSO, NaN3, NaH2PO4•2H2O, and Na2HPO4•12H2O were purchased from Sinopharm Chemical Reagent Co. Ltd. (Shanghai, China). HPLC-grade CHCl3 and CH3OH were obtained from Merck (Darmstadt, Germany). D2O (99.9% in D) containing sodium 3-(trimethyl-silyl) propionate-2, 2, 3, 3, d4 (TSP) as an internal standard for chemical shift reference was provided by Sigma‒Aldrich (MO, USA). A buffer system containing 0.2 M Na2HPO4/NaH2PO4 in D2O at pH 7.4 was prepared to prevent the pH effect on the chemical shifts of metabolites at different concentrations. The assay kits for the determination of sodium-potassium ATPase (Na-K-ATPase), cholinesterase (AChE) and lactate dehydrogenase (LDH) were purchased from Abcam (USA). The assay kits for dopamine (DA) were purchased from RD, USA, the assay kits for epinephrine (E) and norepinephrine (NE) were from Abnova, Taiwan, 5-hydroxytryptamine (5HT) assay kits were from BioSource, and gamma-aminobutyric acid (GABA) assay kits were from Santa Cruz, USA. The assay kits of superoxide dismutas (SOD), malonyldialdehyde (MDA), and glutathione peroxidase (GPx) were purchased from Cayman, USA.
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7

Protein Expression Analysis in Cardiomyocytes

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Cardiomyocytes and cardiac fibroblasts were collected and lysed to extract the proteins. The membrane proteins were extracted with a cell membrane protein extraction kit (Biyuntian Institute of Biotechnology, Shanghai, China) following the manufacturer's instructions. The protein concentration was detected using a BCA assay. The proteins were resolved by 10% sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE) and transferred to polyvinylidene fluoride (PVDF) membranes. Then, the PVDF membranes were blocked with 5% skim milk for 1 h and incubated with antibodies against MR (1 : 60, Abcam), EGFR (1 : 1200, Abcam), pEGFR (1 : 800, Abcam), ERK1/2 (1 : 1000, Abcam), pERK1/2 (1 : 600, Cell Signaling Technology, Inc., USA), Na-K ATPase (1 : 1000, Abcam), and β-actin (1 : 1000, Abcam) overnight at 4°C. After the membranes were washed with TBST, they were incubated with secondary antibodies for 4 h at room temperature. Finally, immunoreactivity was visualized with an ECL kit (Millipore, MA, USA). The relative expression levels (ratio compared to Na-K ATPase or β-actin expression) of the target proteins were quantified by ImageJ software.
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8

Antibody Characterization and Applications

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The following antibodies were from Sigma: anti-hemagglutinin (HA)-tag (H3663; 1:1,000 IB), anti- FLAG-tag (F1804; 1:1,000 IB, 2 μg IP), and anti-Myc-tag (M4439; 1:1,000 IB, 2 μg IP). The following antibodies were from Cell Signaling Technology: non-phosphor (active) β-catenin (#8814; 1:100 IHC), Axin2 (#2151; 1:1,000 IB), β-TrCP (#4394; 1:1,000 IB), PKCδ (#2058; 1:1,000 IB), and phosphor-PKCδ (Ser643/676) (#9376; 1:1,000 IB). The following antibodies were from Santa Cruz Biotechnology: β-catenin (sc-7963; 1:1,000 IB, 2 μg IP), PKCδ (sc-937; 1:100 IF), Lamin B (sc-6216; 1:1,000 IB), tubulin (sc-8035; 1:1,000 IB), normal rabbit IgG (sc-2345; 2 μg IP), normal mouse IgG (sc-2025; 2 μg IP), β-actin (sc-47778; 1:10,000 IB), GST (sc-138; 1:1,000 IB), GSK-3β (sc-9166; 1:1,000 IB) and Cyclin D1 (sc-753; 1:1,000 IB). The following antibodies were from Bethyl Laboratories: TRIM33 (A301-060A; 1:1,000 IB, 2 μg IP), TRIM33 (IHC-00216; 1:100 IHC). The following antibody was from BD Transduction Laboratories: β-catenin (610153; 1:100 IF). The following antibody was from Abcam: Na-K-ATPase (ab76020; 1:1,000 IB). The phosphor-Ser715 β-catenin antibody (1:1,000 IB; 1:100 IHC) was produced by Signalway Antibody (College Park, MD).
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9

Isolation and Characterization of Mitochondrial Proteins

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Mitochondrial proteins were isolated from mice heart by means of a dounce potter in a lysis buffer solution holding EGTA (1 mM), K+ Hepes pH 7.5 (20 mM), MgCl2 (1.5 mM), sucrose (250 mM), EDTA (0.1 mM), KCl (10 mM), protease inhibitors, PMSF (100 μM), Na3VO4 (0.2 mM), NaF (50 mM), DTT (1 mM), digitonin 0.025%. The amount of protein contained in the lysates was evaluated by means of protein assay kit (BIO-RAD, Milan, Italy). Cx43 and pCx43 expression was evaluated by Western blot analysis, as previously described. Primary antibody anti-TOM20 (Santa Cruz, 1:250) was used as loading control. The purity of mitochondrial protein extraction was performed by means of Western blot analysis by evaluation of the presence of proteins expressed only in the mitochondria (ox-Phos Complex II, Abcam, 1:7000) and the absence of proteins expressed in other cellular compartments (Na+/K+ ATPase, Abcam, 1:3000) [45 (link)].
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10

Hepatic ABCC6 Protein Localization

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Immunostaining of liver samples was performed on 6 μm frozen sections. The rat monoclonal anti-human ABCC6 antibody M6II-7 (Cell Sciences) was used to identify human ABCC6 protein. A mouse monoclonal antibody was used to label the basolateral plasma membrane marker Na,K-ATPase (Abcam, Cambridge, MA). The Alexa Fluor 488 donkey anti-rat and Alexa Fluor 594 goat anti-mouse secondary antibodies (Invitrogen) were used. Images were acquired with EVOS FL Auto Imaging Microscopy (Thermo Fisher).
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