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5 protocols using adenosine triphosphate (atp)

1

Bone Marrow-Derived Macrophage Culture Protocol

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Male C57BL/6 mice aged 6–8-weeks-old were purchased from Zhejiang Academy of Medical Sciences, Hangzhou, China. Following euthanasia by cervical dislocation, the lack of heartbeat was confirmed in each animal in accordance with the approved Zhejiang Academy of Medical Sciences protocol. BMDMs from the bilateral posterior femur of mice were rinsed using the DMEM (Genom, Hangzhou, China) medium. BMDMs were cultured in DMEM media supplemented with 50 ng/mL mouse recombinant macrophage colony-stimulating factor, 10% fetal bovine serum (FBS), penicillin (100 U/mL), and streptomycin (100 µM) in a humidified atmosphere containing 5% CO2 at 37 °C. After 7 days of culture, the cells were divided into different groups as follows: vehicle; DI (0.25 mM, Sigma, USA) + vehicle; Dimethyl sulfoxide (DMSO, Sigma, USA) + LPS (500 ng/mL, for 4 h, Sigma, USA) + ATP (5 mM, for 1 h, Sigma, USA); DI (0.25 mM, pre-treatment for 2 h) + LPS + ATP; N-acetyl-L-cysteine (NAC, 1 mM, Sigma, USA) or ML385(10 µM, Selleck, China), DI (0.25 mM, con-treatment for 2 h) + LPS + ATP. The concentrations were performed as described [18 (link), 19 (link)]. The Ethics committee of the Zhejiang Academy of Medical Sciences approved the experimental protocol. All animal experiments met the ARRIVE guidelines [20 (link)].
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2

Immune Signaling Pathway Modulation

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Pam3CSK4 (tlrl-pms), Poly(I:C) (tlrl-piclv), LPS (tlrl-peklps) and Flagellin (tlrl-pafla) were purchased from Invivogen. TNF-α (300–01A), IFN-γ (300–02) and IL-1α (200–01A) were purchased from Peprotech. HMGB1 (1690-HMB) was from R&D system. Rapamycin (S1039), Torin-1 (S2827), z-DEVD-FMK (S7312), z-VAD-FMK (S7023), GSK’872 (S8465) and ATP (S5260) were purchased from Selleck. Ac-YVAD-CMK (SML0429) and necrosulfonamide (480,073) were purchased from Sigma.
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3

Modeling LPS-induced Renal Inflammation

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A rat renal proximal tubular cell line (NRK-52E) was kindly provided by Xiao-li Nie, a professor of School of Traditional Chinese Medicine, Southern Medical University. The cells were cultured at 37°C with 5% CO2 in DMEM/basic medium (Gibco BRL, USA) supplemented with 10% fetal bovine serum (Gibco BRL, USA) and 1% penicillin/streptomycin (Gibco BRL, USA). To investigate LPS-induced renal inflammation in NRK-52E cells, cells were stimulated with 5 μg/mL LPS (L4391, Sigma) for 3 h and total protein or RNA was extracted. Besides, to investigate the levels of inflammatory cytokine secretion in the supernatant through an enzyme-linked immunosorbent assay experiment, cells were treated with 5 μg/mL LPS for 24 h. To investigate the anti-inflammatory effect of MCL in vitro, cells were pretreated with different concentrations of MCL (1.25 μM, 2.5 μM, and 5 μM) (Accendatech Co., Ltd., Tianjin, China) for 48 h and then incubated with LPS. To induce NLRP3 inflammasome activation, cells were incubated with LPS and then with 3 mM ATP (S1985, Selleck, USA) for 1 h before the cells were extracted. In some experiments, cells were treated with 1 μM mitoquinone (MitoQ) (MedChemExpress) for 24 h or 1 μM rotenone (MedChemExpress) for 24 h.
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4

Inhibition of CD39, CD73, and A2AR

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For the inhibition of CD39, freshly isolated cells were firstly preincubated with 10 μM sodium metatungstate (POM‐1) (Selleck) for 2 h. Next, 100 μM ATP (Selleck) was added to the culture system, and the cells were incubated for 24 h. For the inhibition of CD73, freshly isolated cells were firstly preincubated with 1 μM LY‐3475070 (Selleck) for 2 h. Next, 100 μM adenosine monophosphate (AMP) (Selleck) was added to the culture system, and the cells were incubated for 24 h. For the inhibition of A2AR, freshly isolated cells were firstly preincubated with ZM241385 (1 μM) (TargetMol) or Istradefylline (1 μM) (Selleck) for 2 h. Next, 5 μM ADO (Selleck) was added to the culture system, and the cells were incubated for 24 h. A total of 1 million cells were added to each well. When it is difficult to meet the cell number requirement, we would make the number of cells in the experimental group as the same as that in the control group.
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5

Culturing and Transfecting Avian Cell Lines

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Chicken fibroblast (DF-1) cells and chemically immortalized leghorn male hepatoma (LMH) cells were maintained in Dulbecco’s modified Eagle’s medium (DMEM) supplemented with 10% fetal bovine serum (FBS), 100 U/mL penicillin and streptomycin and 2 mM L-glutamine. All cells were incubated at 37 °C in 5% CO2. For functional validation experiments, 5.0 μM ATP (Selleck, Houston, TX, USA, S1985) and 10 μM oxaloacetic acid (OAA, Sigma Aldrich, St. Louis, MO, USA, O7753) were added to the medium according to specific requirements. DF-1 and LMH cells were transfected with Lipofectamine 2000 (Invitrogen, Carlsbad, CA, USA) as recommended by the manufacturer.
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