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4 protocols using 800cw goat anti rabbit 926 32211

1

Western Blot Analysis of Cellular Proteins

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Cell and supernatant samples were separated by SDS-PAGE on an 11% SDS gel at 27 mA for 1 hour. Proteins were then transferred onto nitrocellulose membranes at 16 V over night and blocked for 1 hour in 1% skimmed milk in 0.1% Tween/PBS. Membranes were blotted with primary antibodies for 1 hour at room temperature and washed in 0.1% Tween/PBS. Subsequently, membranes were blotted with secondary conjugated antibody for 1 hour at room temperature and washed again before being visualised on a LI-COR Quantitative Imager. The following antibodies were used according to the manufactures’ instructions: anti-HSP90 sc7947 (Santa Cruz), anti-PKM2 ab38237 (Abcam), anti-HK2 ab104830 (Abcam), anti-GAPDH ab8245 (Abcam), anti-caspase-3 9668S (Cell Signaling), 800CW goat anti-rabbit 926–32211 (LI-COR) and 680RD goat anti-mouse 926–68070 (LI-COR). HIV-1 Gag was detected with supernatant from the mouse hybridoma 183-H12-5C, which was a kind gift from Prof. M. Malim.
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2

Quantitative Western Blot Analysis

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Cell and supernatant samples were separated by SDS–polyacrylamide gel electrophoresis (SDS-PAGE) on 11% gel for p24Gag and 15% gels, according to the size of the target proteins, at 27 mA per gel. Proteins were transferred onto nitrocellulose membrane overnight at 16 V and blocked for 1 h with 1% fat-free milk in 0.1% Tween/PBS. Membranes were incubated with primary antibodies at room temperature for at least 1 h.
The following primary antibodies were used: anti-HIV-1 Gag antibody (mouse hybridoma 183-H12-5C supernatant—kind gift from Prof. M. Malim), anti-GFPT1 (Abcam AB125069), anti-KGA (Proteintech 20170-1-AP), anti-GAC (Proteintech 19958-1-AP), anti-PPAT (OriGene TA504769S) and anti-HSP90 (Santa Cruz sc-7947). After incubation with primary antibodies, membranes were washed and incubated with secondary antibodies 680RD goat anti-mouse 926-68070 and 800CW goat anti-rabbit 926-32211 (both LI-COR) at room temperature for 1 h. Membranes were then washed again before visualization with a quantitative LI-COR imager.
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3

Antibody Validation for Protein Analysis

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Affinity-purified rabbit antibodies against AnkB and GFP were generated in our laboratory and have been previously described (30 (link), 31 (link)). Other antibodies included mouse anti-alpha 1 sodium potassium ATPase (H-3, sc-48345), mouse anti-GFP (B-2, sc-9996), mouse anti-BCKDE1A (H-5, sc-271538), mouse anti-CD98 (E-5, sc-376815), mouse anti-FASN (G-11, sc-48357), and mouse anti-LAT1 (D-10, sc-374232) from Santa Cruz Biotechnology. Rabbit antibodies against mCherry (ab167453) and BCKDHA (phospho S293, ab200577) were purchased from Abcam. We also used rabbit anti-α-tubulin (11224-1-AP), rabbit anti Fabp4 (12802-1-AP), and mouse anti-GAPDH (2D4, 60004-I-AP) from Proteintech; rabbit anti-ASCT2 (ANT-082) from Alomone; and rabbit antibodies against GAPDH (D16H11 XP) and ACL (4332) from Cell Signaling Technologies. Secondary antibodies used for fluorescence imaging were purchased from Life Technologies and included donkey anti-rabbit IgG conjugated to Alexa Fluor 568 (#A10042) and donkey anti-mouse IgG conjugated to Alexa Fluor 568 (#A10037). Fluorescent signals in western blot analysis were detected using goat anti-rabbit 800CW (926–32211) and goat anti-mouse 680RD (926–68070) from LiCOR. Lipid droplets and nuclei were visualized by BODIPY 493/503 (D3922) and DAPI (D1306) staining, respectively, purchased from Life Technologies.
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4

Multimarker Immunoblotting and Imaging

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Primary antibodies: anti-K V 11.1, APC-062 (Alomone, Jerusalem, Israel, 1:500); anti-PKD1, H00005587-A01 (Abnova, Roskilde, Denmark, 1:500); anti-β-tubulin, MAB3408 (Millipore, Hellerup, Denmark, 1:4000).
Secondary antibodies: For western blot analyses; peroxidase conjugated affinipure F(ab)fragment donkey anti-rabbit and anti-mouse (Jackson ImmunoResearch, Suffolk, UK), donkey anti-mouse 680RD, 926-68072 (LI-COR Biosciences, Copenhagen, Denmark); goat anti-rabbit 800CW, 926-32211 (LI-COR Biosciences). For confocal imaging; Alexa Fluor®488-conjugated donkey anti-rabbit IgG (1:200), Alexa Fluor®568-conjugated donkey anti-mouse IgG (1:200). Alexa®Fluor 647 Phalloidin (1:200) was used to stain actin filaments and DAPI (1:300) was used to stain the nucleus. Secondary antibodies were purchased from Invitrogen (Glostrup, Denmark).
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