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6 protocols using celltiter96 mts reagent

1

Cytotoxicity and Synergy Assays

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Cells were plated in 96-well plates with drugs at varying concentrations alone or in combination (Vel, Gilt, and Quiz alone for cytotoxicity assays, Vel and/or Gilt or Tal and/or Gilt for synergy assays). Plates were incubated for 72 h and were then terminated with CellTiter96 MTS Reagent (Promega) and incubated for an additional 2–4h for reagent metabolism. Absorbance was measured and used to determine the fraction of cells affected by treatment. Combination indices (if determining synergism) were calculated according to the Chou-Talalay method using CompuSyn software.
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2

Combination Drug Cytotoxicity Assay

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Cells were plated on 96-well plates and treated with various concentrations of drugs alone or in combination at a constant ratio (1:20 BMN:AZA and 1:1 BMN:DAC). Following daily treatments for 7 days, the assays were terminated using CellTiter96 MTS reagent (Promega) and absorbance values were used to determine the fraction of cells affected (Fa) in each treatment and determine combination indices according to the Chou-Talalay method using CompuSyn software.
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3

Synthesis and Characterization of DES

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All chemicals were analytical grade and used without further purification. Sulfuric acid-hydrolyzed CNCs (98% freeze-dried powder, 0.8–0.9% S) were purchased from the University of Maine, USA. Ascorbic acid, butylated hydroxyanisole (BHA), copper (II) bromide (CuBr2), dimethylformamide (DMF), glycerol, proline, potassium carbonate (K2CO3), p-toluenesulfonyl chloride, sodium azide (NaN3), triethylamine, 6-hydroxy-2,5,7,8-tetramethylchroman-2-carboxylic acid (Trolox), and syringaldehyde were purchased from Sigma-Aldrich. Propargyl bromide (80 wt% in toluene) was acquired from Acros Organics, and diethyl malonate and pyridine were from Tokyo Chemical Industries (TCI). 2,2-diphenyl-1-picrylhydrazyl (DPPH) radical was acquired from Bio-Strategy Pty Ltd, Australia. Dulbecco’s Modified Eagle Medium (DMEM) was purchased form Gibco™, and CellTiter 96® MTS reagent was purchased from Promega, Australia. Cream N (Neutrogena® Oil-Free Moisture) and Cream S (Neutrogena® Oil-Free Moisture Sun Protection Factor (SPF) 15,13.5% active ingredients) are commercially available facial creams purchased in a local pharmacy. DES was synthesized via proline-mediated Knoevenagel condensation of syringaldehyde and diethyl malonate (Figure S1), as we have reported previously [14 (link)].
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4

Globo H Impacts Cell Viability

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The effect of Globo H on live
cells was measured with an assay for cell viability. MCF-7 cells (5000/well)
in medium were added to the wells of a 96-well plate from Corning
(Corning, NY) and grown for 3 days in the presence of Ac32FF (100 μM in 0.1% v/v DMSO),43 (link),44 (link) DMSO (0.1%
v/v) alone, or H2O2 (1 mM). The medium was replaced
with serum-free medium, and RNases in PBS were added at various concentrations.
Cells were then incubated for 44 h. The medium was removed, and the
cells were incubated in CellTiter 96 MTS reagent from Promega (Madison,
WI) for 2 h. The absorbance was then measured at 490 nm and normalized
to that from cells treated with 0.1% v/v DMSO alone (100%) and 1 mM
H2O2 (0%).
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5

Cell Viability Assay with Tetrazolium Dye

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Assays for cell viability in the presence of a drug(s) were performed with a tetrazolium dye-based assay for cellular metabolic activity (20 (link)). Cells in complete growth medium were plated at 5,000 cells per well in a 96-well microplate, which was incubated for 24 hours. Cells were then treated with increasing concentrations of each compound, either kinase inhibitors or QBI-139. After 48 h, the medium was removed, and cells were incubated for 2 hours with CellTiter 96 MTS reagent from Promega. Absorbance was recorded on an M1000 fluorimeter from Tecan (Morrisville, NC) at 490 nm. Data were analyzed with Prism 5.0 software from GraphPad (La Jolla, CA). Values of EC50, which is the concentration of a drug that gives half-maximal cell viability, were calculated with the equation:
y=ymin+ymaxymin1+10(logEC50x)h
where y is cell viability, x is the concentration of drug, and h is the Hill coefficient. Data were plotted on a log scale with each data point being the mean of 3 biological replicates.
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6

Cell Viability Assay Protocol

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Cells were cultured in complete media (described above) in the absence or presence of the respective Cmax concentration determined for each respective drug dose curve. Cells were seeded at a concentration of 1.0 × 104 cells per well in a 96-well plate. Culture plates were kept in incubation at 37 °C, 5 % CO2 for 72-h. After 72-h, CellTiter96 MTS Reagent (Promega) was used according to manufacture instructions. Absorbance was recorded at 490 nm using a 96-well plate reader.
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