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24 protocols using dorsomorphin dihydrochloride

1

Cardiac Differentiation of mESCs

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mESCs were submitted to cardiac differentiation according to Chen et al. [13 (link)]. mESCs were dissociated by 0.25% trypsin–EDTA (Gibco) and cultured using the hanging drop (HD) method to form embryoid bodies (EBs). Approximately 600 cells in each 20-μl drop of differentiation medium (high glucose (4.5 g/l) Dulbecco’s Modified Eagle’s medium (DMEM; Gibco) supplemented with 20% (v/v) FBS, 2 mM l-glutamine (Sigma-Aldrich), 50 U/ml penicillin–streptomycin (Gibco), 1% (v/v) nonessential amino acids (Gibco), 0.1 mM β-mercaptoethanol (Gibco), 2 μM dorsomorphin dihydrochloride (Tocris Bioscience) and 1% dimethyl sulfoxide (DMSO; Sigma-Aldrich)) were plated on the lids of 100-mm plates (Corning) and cultured using the HD technique for 2 days. Subsequently, EBs were cultured in suspension in 60-mm plates (Corning) coated with poly 2-hydroxyethyl methacrylate (Sigma-Aldrich) in the same differentiation medium described earlier, excluding dorsomorphin, for 3 days. EBs were transferred to 0.1% (v/v) gelatin-coated dishes (35 mm; Corning) and cultured in differentiation medium, without dorsomorphin and DMSO, for another 10 days.
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2

Induced Neuronal Differentiation

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FUW‐tetO‐LoxP and pLKO.1/p53shRNA were purchased from Addgene. The GSK inhibitor CHIR 99021 was purchased from Reagents Direct (R&D). Dorsomorphin dihydrochloride and SB431542 were obtained from Tocris. Y27632 was purchased from Sigma‐Aldrich, and Purmorphamine was obtained from Swlleckchem. The Recombinant human factors (GDNF, BDNF, and NGF) were purchased from PeproTech. Human Ascl1 and miR‐124 sequences were subcloned to the EcoRI site in the FUW‐tetO‐LoxP vector (Jiang et al., 2015). All the plasmids were confirmed by sequencing directly.
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3

Efficient Neural Induction Protocol

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The cells were switched to the neural induction medium containing 1:1 mixture of N2/B27 medium containing 10 ng/ml basic fibroblast growth factor (b-FGF), 1 µM Dorsomorphin dihydrochloride (Tocris, 3093), 10 µM SB431542 (Tocris, 1614), 100 ng/ml mouse recombinant Sonic Hedgehog (SHH)-C25II (Genscript, Z03050-50), and 10 µM CHIR99021 (Sigma, SML1046). The N2 medium consisted of DMEM/F12 medium (Gibco) with 1× N2 supplement (Gibco, 17502048), 5 µg/ml insulin (Sigma, 19278), 1 mM L-Glutamine (Lonza, 17605E), 100 µM MEM-Non-Essential Amino Acid solution (NEAA) (Gibco), 100 µM 2-mercaptoethanol (Sigma, M3148), and 1:100 Penicillin-Streptomycin (Lonza, 17602E). The B27 medium consisted of a Neurobasal medium (Gibco) and 1× B27 supplement (Gibco, 17504044). The cells were washed daily using DPBS and maintained in the induction medium.
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4

Differentiation of mESCs to Cardiomyocytes

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mESCs were submitted to cardiac differentiation using a protocol adapted from Chen et al. [18 (link)]. mESCs were dissociated by 0.25% trypsin-EDTA and cultured using the hanging drop (HD) method to form embryoid bodies (EBs). Approximately 600 cells in each 20 µL drop of differentiation medium [high glucose (4.5 g/L) Dulbecco’s Modified Eagle’s medium (DMEM; Gibco) supplemented with 20% (v/v) FBS, 50 U/mL penicillin-streptomycin (Gibco), 2 mM L-glutamine (Sigma-Aldrich), 0.1 mM β-mercaptoethanol (Gibco), 1% (v/v) nonessential amino acids (Gibco), 2 µM dorsomorphin dihydrochloride (Tocris Bioscience) and 1% dimethyl sulfoxide (DMSO; Sigma-Aldrich)] were plated on the lids of 100 mm plates (Corning) and cultured as HD for 2 days. After that, EBs were transferred to 60 mm plates (Corning) coated with poly 2-hydroxyethyl methacrylate (Sigma-Aldrich) and cultured in suspension using a medium with the same specification, except for dorsomorphin. On day 5, EBs were transferred to 0.1% (v/v) gelatin-coated dishes (35 mm; Corning) and cultured in differentiation medium, without dorsomorphin and DMSO for ten more days. In this step, the culture media was changed every 2 days. On day 15, the cardiomyocytes derived from the mESC (CM-mESC) were obtained.
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5

Pharmacological Modulators of Cellular Signaling

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Sodium iodoacetate (IAA), 2.4-dinitrophenol (DNP), adenosine 2′,3′-cyclic monophosphate (2′,3′-cAMP), adenosine 2′-monophosphate (2′-AMP), adenosine 3′-monophosphate (3′-AMP) were from Sigma–Aldrich (St. Louis, MO). Dorsomorphin dihydrochloride and MRS 1754 were from Tocris Bioscience (Bristol, UK). 8-Bromoadenosine-2′3′-cyclic monophosphate (8-Br-2′3′-cAMP) was from BIOLOG (Bremen, Germany).
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6

Local and Whole-Embryo Chemical Treatments

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For local treatment with chemicals or proteins, AG1X2-formate beads (for chemicals) or Affigel Blue beads (BIO-RAD, 1537302; for BMP4) were soaked in different concentrations of the desired protein or chemical overnight at 4 °C. Beads were washed in PCS before grafting. Dimethyl sulfoxide (DMSO, 0.2%) or BSA (0.1%) was used to dilute the chemicals or proteins, respectively, and for soaking the control beads. Final concentrations used for microbead-soaking: 50 ng/μl recombinant human BMP4 (R&D systems, 312-BP), 200 µM dorsomorphin dihydrochloride (Tocris, 3093), 2 µM ionomycin (Sigma, I9657). For chemical treatment to the whole embryo, the chemical was diluted first in PBS (1:10 v:v) and then in egg albumen (9:10 v:v), which was used to culture the embryos (under the vitelline membrane). For treatments with VIVIT (Tocris, 3930) and BAY 11-7821 (Tocris, 1744), embryos were first soaked in the chemical diluted in PCS for 1 h, prior to culture with albumen containing the same concentration of the chemical. Final concentrations used for treatment of whole embryos: 20 µM dorsomorphin, 200 µM flufenamic acid (Sigma, F9005), 2 µM ionomycin, 50 µM, nicardipine (Sigma, N7510), 20 µM U73122 (Sigma, U6756), 20 µM U73343 (Sigma, U6881), 12 µM VIVIT (Tocris, 3930), 12.5 µM BAY 11-7821 (Tocris, 1744).
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7

Xeno-free Culture of Human iPSCs

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The study was approved by the Ethical Committee of the CHA University Bundang CHA Hospital, Republic of Korea (application number: KNC12005). Human adult dermal fibroblasts (ScienCell Research Laboratories, Carlsbad, CA, USA) were cultured in DMEM (WelGENE, Daegu, Korea) supplemented with 10% fetal bovine serum (FBS), 2 mM L-glutamine (Invitrogen) and 1x penicillin/streptomycin (P/S) (all from Invitrogen, Carlsbad, CA, USA).
Human iPS cells were cultured on vitronectin XF (Primorigen Biosciences, Madison, USA) coated culture dishes using our recently established xeno-free/feeder-free hPSC culture medium with minor modifications [17 (link)]. Briefly, the medium consisted of DMEM/F12, 15% KnockOut SR XenoFree CTS, 1x nonessential amino acids (NEAA), 1x GlutaMAX, 0.1 mM β-mercaptoethanol, 1x P/S (all from Invitrogen), 10 ng/mL basic fibroblast growth factor (bFGF) (CHA Biotech Co., Daejeon, Korea), 10 nM trichostatin A (TSA) (Sigma-Aldrich, St. Louis, MO, USA), 5 uM Gö6983 (Tocris, Ellisville, MO, USA), and 1 mM dorsomorphin dihydrochloride (Tocris).
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8

Stem Cell Differentiation Protocol

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Gelatin, putrescine, selenium, progesterone, apotransferrin, glucose and insulin were obtained from Sigma (Steinheim, Germany). Accutase was from PAA (Pasching, Austria). FGF-2 (basic fibroblast growth factor), noggin and sonic hedgehog were obtained from R&D Systems (Minneapolis, MN, USA). Y-27632, SB-43154 and dorsomorphin dihydrochloride were from Tocris Bioscience (Bristol, UK). MatrigelTM was from BD Biosciences (Massachusetts, USA). All cell culture reagents were from Gibco/Invitrogen (Darmstadt, Germany) unless otherwise specified.
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9

Efficient Stem Cell Culture Protocols

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Gelatine, putrescine, sodium selenite, progesterone, apotransferrin, glucose, insulin, ascorbic acid, valproic acid and ICRT3 were obtained from Sigma (Steinheim, Germany). Accutase was from PAA (Pasching, Austria). FGF-2 (basic fibroblast growth factor), FGF-8b, Sonic hedgehog and noggin and were obtained from R&D Systems (Minneapolis, MN, USA). Y-27632, SB-43154, CHIR99021 and dorsomorphin dihydrochloride were from Tocris Bioscience (Bristol, UK). MatrigelTM was from BD Biosciences (Massachusetts, USA). All cell culture reagents were from Gibco/Invitrogen (Darmstadt, Germany) unless otherwise specified.
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10

Plasma Hormone Measurement and Manipulation

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Plasma LH was measured using a sensitive sandwich ELISA37 (link) with a theoretical detection range of whole blood mLH (in a 1:30 dilution) of 0.117–30 ng ml−1. The intra- and interassay coefficients of variation were 6.05% and 4.29%, respectively. The GnRH antagonist cetrorelix acetate (Sigma, 0.5 mg Kg−1) was injected i.p. 1 h before i.c.v. injection, while the ALK inhibitor (dorsomorphin dihydrochloride, Tocris, 100 μM) was injected intravenously 2 h before. Animals were killed by cervical dislocation and trunk blood was collected in sterile Eppendorf tubes and left on ice until centrifugation, plasma was frozen and stored at −80 °C until use. Plasma FSH and AMH levels were measured using, respectively, a commercial ELISA kit (Endocrine Technologies, Inc.) and a competitive ELISA kit (CUSABIO; #CSB-E13156m), following manufacturer's instructions.
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