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25 protocols using pe cy7 anti mouse cd45

1

Isolation and Characterization of Mouse Adipose-Derived Stem Cells

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Mouse adipose-derived stem cells (ASCs) were isolated from inguinal subcutaneous fat of C57BL/6 mice that were fed normal chow. The cells were cultured as described previously [12 (link)]. Briefly, subcutaneous adipose tissues were digested with collagenase type 1 (Sigma-Aldrich, St. Louis, MO, USA) in PBS (phosphate-buffered saline) by incubation in a shaker at 37 °C for 30 min. The digestion was terminated by the addition of 10% fetal bovine serum (FBS), and centrifuged at 1200 rpm for 5 min. Cells were suspended in complete medium made of DMEM/F12 (Dulbecco modified Eagle medium) medium supplemented with 10% FBS and 1% penicillin and streptomycin. Cells were cultured in 37 °C at 5% CO2 incubator. ASCs at passage 3–5 were used in all the experiments.
ASCs were identified by FACS as described previously [12 (link)] with fluorescence-conjugated anti-mouse antibodies, FITC Hamster Anti-Rat CD29 (BD Pharmingen; Cat.555005), Alexa Fluor 647 Rat anti-Mouse CD34 Clone RAM34 (RUO) (BD Pharmingen; Cat.560233), APC Rat Anti-Mouse CD90.2 Clone 53-2.1 (RUO) (BD Pharmingen; Cat.561974), APC anti-mouse CD105 (Biolegend; Cat.120413), PE anti-mouse CD31 (Biolegend; Cat.102407), or PE/Cy7 anti-mouse CD45 (Biolegend; Cat.103113), according to the manufacturer’s instructions. Flow cytometry was conducted on a Becton-Dickinson LSR I analyzer.
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2

Zymosan-Induced Peritoneal Inflammation

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C57BL/6J or apoA1 TG mice were administered 100 µg zymosan A (Sigma-Aldrich) in PBS. After 16 hr mice were sacrificed and peritoneal exudates collected by lavage with 5 ml of ice cold sterile PBS with 2 mM EDTA. Total cell counts and cellular composition of peritoneal exudate were determined as previously described (Iqbal et al., 2014 (link)). Antibodies used to identify neutrophils (CD45+/CD115lo/Ly6G+) and monocytes (CD45+/CD115hi/Ly6Chi/lo) were APC anti-mouse Ly-6G/Ly-6C (Gr-1), PE anti-mouse CD115 (CSF-1R), and PE/Cy7 anti-mouse CD45 from Biolegend (San Diego, CA). Total blood cell counts were determined with a Genesis blood counter (Oxford Science, CT).
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3

Neutrophil Infiltration Quantification in BALF

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To quantify neutrophil infiltration, the bronchoalveolar lavage fluid (BALF) from immunized mice 24 h post-challenge was collected and centrifuged. The pellet was stained using the following antibodies: PE/Cy7 anti-mouse CD45 and APC/Cy7 anti-mouse Ly-6G (Biolegend). Then, the samples were analyzed using BD FACSArray software TM on a BD FACS Array flow cytometer (BD Biosciences). In addition, the concentrations of pro-inflammatory cytokines in the supernatant, such as IL-1β and TNF-α, were quantified by a Mouse Quantikine ELISA. The protocol was performed based on the manufacturer's (Biolegend) instructions.
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4

Phagocytosis Assay of Klebsiella Pneumoniae

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The phagocytosis assay was performed as previously described (23 (link)). Briefly, MF and neutrophils isolated from the bone marrow by gradient percoll separation were incubated in the presence of acetate (1 mM) and opsonized-pHRodo-marked Kp (MOI1:1). Cells [0.5 × 106 for neutrophils and 0.5 × 105 alveolar macrophage (AM)] were incubated in RPMI 1640 medium without antibiotics supplemented with 10% heat-inactivated FBS for 60 (AM) or 120 min (neutrophils). Cells were then washed, resuspended in 100 µL PBS, and incubated with anti-F4/80 (APC anti-mouse F4/80 Clone BM8, BioLegend, San Diego, CA, USA) and −CD45 (Pe-Cy7 anti-mouse CD45, BioLegend) or anti-Ly-6G (PE anti-mouse Ly-6G Clone 1A8, BioLegend). Trypan blue at a final concentration of 0.5% was added to quench the fluorescence of non-internalized bacteria. Negative controls consisting of cells incubated without Kp were used to set the fluorescence. Samples (10,000 events) were analyzed by flow cytometry (Gallios, Beckman Coulter, Brea, CA, USA). Both the percentage of cells that internalized bacteria and the mean fluorescence of bacteria within the cells were analyzed.
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5

Quantifying Neutrophils and Cytokines

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To quantify the neutrophils infiltration, cells in BALF from mice 24 hours post challenge were collected and stained using the following antibodies: PE/Cy7 anti-mouse CD45 and APC/cy7 anti-mouse Ly-6G (Biolegend, Inc, USA). Samples were then analyzed using BD FACSArray softwareTM on a BD FACS Array flow cytometer (BD Biosciences).
To quantify pro-inflammatory responses, cytokines such as TNF-α, IL-1β and IL-6 in BALF were collected 8 and 24 hours after infection with PAO1. The concentrations of pro-inflammatory cytokines were determined using a Mouse Quantikine ELISA kit for TNF-α, IL-1β or IL-6 (R&D Systems, USA), respectively, according to the manufacturer’s instructions.
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6

Radioisotope Production and Cellular Analysis

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The radioisotope 211At was produced via 209Bi (α, 2n) 211At reaction through CS-30 cyclotron according to the published protocol [25 (link)]. Bovine serum albumin (BSA), Manganese chloride tetrahydrate (MnCl2·4H2O), and sodium hydroxide (NaOH) were from Sigma-Aldrich. Roswell park memorial institute (RPMI) 1640 medium, penicillin-streptomycin, and fetal bovine serum (FBS) were obtained from Gbico. The cell counting kit-8 (CCK-8) was obtained from Biosharp. The anti-mouse PD-L1 antibody was obtained from BioXcell (clone:10F.9G2). APC anti-mouse CD45(Catalog: 103111), FITC anti-mouse CD3 (Catalog: 100203), BV421™ anti mouse CD4(Catalog: 100437), APC/Cy7 anti-mouse CD8a (Catalog: 100714), PE anti-mouse FOXP3 (Catalog: 126403), FITC anti-mouse CD11c (Catalog: 117305), PE anti-mouse CD86 (Catalog:105007), APC anti-mouse CD80 (Catalog: 104713), PE/Cy7 anti-mouse CD45 (Catalog: 103113), PE anti-mouse CD44(Catalog:103023) and BV421- anti-mouse CD62L (Catalog: 104435) antibodies were obtained from Biolegend, Tumor necrosis factor alpha (TNF-α) and interferon gamma (IFN-γ) ELISA kit was purchased from Multisciences Biotech, Co., Ltd.
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7

Murine Allergic Inflammation Assay

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Extract from Dermatophagoides farinae (Df) was obtained from Greer Laboratories (XPB81D3A25; Lenoir, NC). Ovalbumin (OVA) and PBS were obtained from Sigma-Aldrich (St Louis, Mo). The mMCP-1 EIA kit was purchased from eBiosciences (San Diego, Calif). LTA4, LTC4, LTD4, LTE4, MK571, and HAMI3379 were obtained from Cayman Chemical (Ann Arbor, Mich). Histamine, thromboxane receptor B2, PGD2, and cysLT EIA kits were obtained from Cayman. IL-4, IL-5, IL-13, ICAM-1, and VCAM-1 EIA kits were from R&D Systems (Minneapolis, Minn). The CXCL7 EIA kit was purchased from Abcam (Cambridge, Mass). The HMGB1 EIA kit was from LifeSpan (Providence, RI). The monoclonal goat anti-mouse IL-33 was purchased from R&D Systems (Minneapolis, Minn), and the rat anti-mouse IgG (H1L) secondary antibody, fluorescein isothiocyanate (FITC) anti-mouse CD11c, FITC anti-mouse/human CD11b, FITC anti-mouse IgE, FITC anti-mouse CD3ε, FITC anti-mouse CD19, FITC anti-mouse CD8a, FITC anti-mouse NK-1.1, FITC anti-mouse Ly-6G/Ly-6C (Gr-1), allophycocyanin (APC) anti-mouse CD45, APC/cyanine 7 (Cy7) anti-mouse/human CD44, PerCP/Cy5.5 anti-mouse CD90.2, phycoerythrin (PE) anti-mouse CD278 (inducible costimulatory molecule), APC anti-mouse CD41, PE/Cy7 anti-mouse CD62P, APC anti-human CD61, anti-mouse CD16/32, PE/Cy7 anti-mouse CD45, and PE anti-mouse Siglec F were all obtained from BioLegend (San Diego, Calif).
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8

Pancreatic Immune Cell Profiling

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Freshly harvested pancreatic tissue samples were digested in 0.75 mg/mL collagenase-P (Roche Basel, Switzerland) solution at 37°C for 15 min. Subsequently, tissue was homogenized in gentleMACS™ Dissociators (Miltenyi Biotec, Bergisch Gladbach, Germany) and filtered through 75 μm filter screen with phosphate buffer saline (PBS). Single-cell suspensions were incubated for 15 min at room temperature in PBS with the following antibodies: PE/Cy7 anti-mouse CD45, Alexa Fluor 488 anti-mouse F4/80, Brilliant Violet 421 anti-mouse/human CD11b, PE anti-mouse CD206 (MMR), Alexa Fluor 647 anti-mouse Ly6G and APC anti-mouse CD86 from Biolegend (CA, USA). Isotype-matched controls were included in all experiments. Gating methods of fluorescence-activated cell sorting were programmed as CD45+CD11b+Ly6G+ (for neutrophils), CD45+CD11b+F4/80+CD86+ (for M1 macrophages) and CD45+CD11b+F4/80+CD206+ (for M2 macrophages). Stained cells were analyzed on an Attune NxT flow cytometer (Thermo Fisher Scientific, MA, USA).
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9

Quantifying Lung Neutrophils and Cytokines in Pneumonia

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To quantify the neutrophils’ infiltration of lungs in the pneumonia model, cells in bronchoalveolar lavage fluid (BALF) from mice 24 h post challenge were collected and stained using the following antibodies: PE/Cy7 anti-mouse CD45 and APC/cy7 anti-mouse Ly-6G (Biolegend Inc., United States). Samples were then analyzed using BD FACSArray software on a BD FACS Array flow cytometer (BD Biosciences).
To quantify proinflammatory responses, cytokines such as TNF-α, IL-1β, and IL-6 in BALF were collected 24 h after infection. The concentrations of proinflammatory cytokines were determined using a Mouse Quantikine ELISA kit for TNF-α, IL-1β or IL-6 (R&D Systems, United States) according to the manufacturer’s instructions.
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10

Immune Cell Detection in Mice

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In 96-well, U-bottom plates, 1 × 106 erythrocyte-depleted cells in PBS and 2% FBS were added for a total volume of 100 μl. For the detection of macrophages in mouse spleens, single cell suspensions were stained with PE/Cy7 anti-mouse CD45 and APC anti-mouse F4/80. For the detection of neutrophils in mouse blood, cells were stained with PE/Cy7 anti-mouse CD45 and APC/cy7 anti-mouse Ly-6G (Biolegend, Inc., USA). Samples were then analyzed using BD FACSArray softwareTM on a BD FACSArray flow cytometer (BD Biosciences).
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