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17 octadecynoic acid

Manufactured by Merck Group

17-octadecynoic acid is a fatty acid compound commonly used in laboratory research. It serves as a precursor and building block for various chemical and biological applications. The product's core function is to provide a reliable source of this specific fatty acid for experimental purposes, without interpretation or extrapolation on its intended use.

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2 protocols using 17 octadecynoic acid

1

Synthesis of Click-Sphingomyelin Analogue

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N-(Octadec-17-yn)-Sphing-4-enin-1-phosphocholine (click-SM) was synthesized as described before [36 (link)]: 5 mg (17.8 μmol) of 17-octadecynoic acid (Sigma-Aldrich, O8382) were dissolved under argon atmosphere in 4 ml of dry MeOH. 10.8 μmol (50 mg) D-erythro-sphingosylphosphorylcholine (M = 465.3 g/mol Avanti Polar Lipids, 860600P) in dry ethanol was added and the mixture was set to 45°C. 17 mg (68.8 μmol) of 2-ethoxy-1-ethoxycarbonyl-1,2-dihydroquinoline (EEDQ, Sigma-Aldrich, 149837) was added and the solution was stirred for 3.5 h. After another addition of 15 mg (60.7 μmol) of EEDQ and stirring for 45 min, the solution mixture was brought to RT and stirred for 16 h. The solvent was removed and the residue was purified by chromatography using silica gel 60 (0.063–0.200 mm, Merck, 1.07734.1000) and dichloromethane (25 ml), dichloromethane/MeOH (8:2, V/V, 25 ml) and dichloromethane/MeOH/H2O (50:25:6, v/v, 130 ml). Yield was 69%, (7.45 μmol, 5,4 mg, M: 727.57 g/mol). Mass was confirmed by precursor ion scan for m/z 184 on a triple-quadrupole-instrument (Quattro II, Micromass) as [M+H]+ 727.34.
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2

Click Chemistry for GFP-Claudin Analysis

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HEK293 cells transiently expressing GFP-tagged claudin were labeled with 25 µM 17-octadecynoic acid (Sigma-Aldrich, O8382) in a normal culture medium for 24 h. The cells were washed with PBS and lysed in RIPA buffer (50 mM Tris-HCl, pH 7.5, 150 mM NaCl, 1% NP-40, 0.5% sodium deoxycholate, 0.1% SDS, and protease inhibitors). Lysates were incubated with anti-GFP antibody overnight at 4 °C. Protein G Sepharose (GE Healthcare) was added to lysate and incubated for 3 h. Immunoprecipitated GFP-tagged proteins were eluted from the beads with 1% SDS, 50 mM HEPES pH −7.4 and adjusted to 1 mM CuSO4 (Wako, 030-04442), 1 mM Tris(2-carboxyethyl)phosphine hydrochloride (Sigma-Aldrich Co., C4706), 100 µM Tris[(1-benzyl-1H-1,2,3-triazol-4-yl)methyl]amine (Tokyo Chemical Industry, T2993), and 100 µM TAMRA-Azide-Biotin (Click Chemistry Tools, #1048). The reaction mixture was gently shaken at RT in darkness for 1 h. The click reactions were stopped by adding 10 volumes of ice-cold methanol, and proteins were precipitated overnight at −80 °C. The precipitated samples were spun down at 15,000 rpm at 4 °C for 30 min, rinsed in ice-cold methanol, and eluted in SDS sample buffer for analysis by SDS-PAGE. Gels were scanned with an Amersham Typhoon scanner (GE Healthcare).
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