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Goat anti mouse cd31

Manufactured by R&D Systems
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Goat anti-mouse CD31 is a primary antibody that recognizes the mouse CD31 (also known as PECAM-1) cell surface antigen. CD31 is expressed on the surface of endothelial cells, platelets, and certain leukocyte subsets. This antibody can be used for the identification and isolation of endothelial cells in mouse tissue samples.

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10 protocols using goat anti mouse cd31

1

Evaluation of APOL1 Antibodies in Kidney Tissue

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Formalin-fixed, paraffin-embedded kidney tissue sections were subjected to antigen retrieval as previously described [8 (link)]. Antibodies used to examine APOL1 expression in this paper was a rabbit anti-human APOL1 (Sigma, HPA018885, lot E105260, 1:400 dilution). Numerous lots of this Sigma rabbit polyclonal in addition to other commercial monoclonal antibodies were also evaluated and the results are summarized in Supplemental Table 1A-1C and Supplemental Figure 1 in S1 Data. Of note, many of these polyclonal antibody lots have been exhausted and are no longer available from Sigma. Other primary antibodies include: rabbit anti-mouse APOA1 (ThermoFisher, 1:500 dilution), goat anti-mouse CD31 (R&D Systems, 1:200 dilution), guinea pig anti-nephrin (USB, 1:200), and mouse anti-GLEPP1 (gift of Roger Wiggins, 1:50). FITC-labeled Lotus tetragonolobus lectin (Vector labs) was used to label proximal tubule cells as previously described [8 (link)]. For testing of commercial antibodies against human APOL1, kidney tissues were fixed using a variety of methods and paraffin embedded for immunohistochemistry using various antigen retrieval methods. Details for each of these processing methods are provided in the Supplemental Detailed Methods in S1 Data.
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2

Immunofluorescent Characterization of Pericytes

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Primary human brain vascular pericytes were obtained from ScienCell (Carlsbad, CA) and grown according to the vendor's instructions. Human recombinant TGF-β was purchased from Peprotech (100-21). Antibodies used in the immunofluorescent staining were purchased from commercial sources as follows: rabbit-anti-mouse collagen IV (Millipore, AB756P), mouse-anti-mouse-α-SMA-FITC (Sigma, F3777), goat-anti-mouse CD31 (R&D, AF3628), Alexa Fluor 555 conjugated goat-anti-Rabbit Ig (Invitrogen, A21429) and Alexa Fluor 488 conjugated goat-anti-human Ig (Invitrogen, A11013). Two monoclonal anti-CD248 antibodies, Clone 8 and 9G5, were generated in house by immunization of rabbits or rats (respectively) with a CD248ECD-Fc fusion protein. These antibodies were selected for all immunostaining and internalization assays as they do not compete with MORAb-004 for CD248 binding in a competition FACS assay (Figure S1C).
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3

Immunohistochemical Staining of Murine Tissues

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Paraffin-embedded murine tissues were cut at 3 um and placed on super-frost slides. After dewaxing and rehydration, antigen unmasking was performed with Decloaking Chamber in DIVA Buffer 1X (DV2005L2J Biocare Medical, Pacheco, CA, USA) (3 min at 125 °C, 5 min at 90 °C) (CD31, CD3, Ly6G); for IBA1 staining, antigen unmasking was not performed. Endogenous peroxidases were blocked with 2% H2O2 for 20 min and then rodent block M (for IBA1) or PBS/BSA (bovin serum albumin) 2% (for CD31, CD3, and Ly6G staining) were used to block unspecific binding sites. Sections were incubated with the following antibodies: rabbit anti-mouse IBA-1 (1:250, Wako), goat anti-mouse CD31 (1:1000, R&D), rat anti-mouse CD3 (1:1000, Serotec), and rat anti-mouse Ly6G (1:200, BD Biosciences). All the primary antibodies were incubated for 1 h in a humid chamber at room temperature. As secondary antibody, we used a Rat on Mouse HRP polymer kit (Biocare Medical) (CD3, Ly6G), Goat on Rodent (Biocare Medical) (CD31), and Mach1 (Biocare Medical) (IBA1). Reactions were developed with 3,3′-diaminobenzidine, DAB (Biocare Medical) and then counterstained with hematoxylin and mounted with Eukitt.
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4

Immunofluorescent Staining of Tumor Antigens

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The FAP and EDA expressions were confirmed on 8 µm cryostat sections of SKRC52-hFAP fixed in ice-cold acetone. The primary antibodies utilized were 7NP2 IgG1, F8 IgG2a, KSF IgG4 (at 5 µg/mL) (the KSF antibody is specific for an irrelevant antigen), and rat anti-mouse CD31 for the staining of blood vessels (R&D AF3628). Detection was performed with goat anti-mouse Alexa 594 (Invitrogen A11005), goat anti-human Alexa 488 (Invitrogen A11013), and donkey anti-rat Alexa 594 (Invitrogen A11058). The tumor antigen expression was confirmed utilizing IL2-7NP2-TNFmut, IL2-F8-TNFmut, and IL2-KSF-TNFmut. In this case, the detection was performed with rat anti-IL2 (eBioscience 14-7029-85) and anti-rat AlexaFluor488 (Invitrogen A21208). For vascular staining, goat anti-mouse CD31 (R&D, Minneapolis, MI, USA, catalog: AF3628) and anti-goat AlexaFluor594 (Invitrogen A11058) antibodies were used. The cell nuclei were stained with DAPI (Invitrogen; D1306). Finally, the slides were mounted with a fluorescent mounting medium (Dako, Santa Clara, CA, USA) and analyzed with a wide-field Leica TIRF microscope using Leica LAS X Life Science Microscope Software (v 1.4.4, Wetzlar, Germany).
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5

Frozen Skeletal Immunofluorescence Staining

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Frozen sectioning for skeletal immunofluorescence staining were prepared according to a published protocol and our recent studies14 (link),18 (link),42 (link). Primary antibodies (rat anti-mouse CD200 (Abcam), rabbit anti-mouse SP7 (Abcam, USA), goat anti-mouse CD31 (R&D, USA) and rat anti-mouse endomucin (Santa Cruz, USA)) and species-specific secondary antibodies with Alexa Fluor 488 and 594 (Invitrogen, USA) were used in this study.
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6

Immunostaining Protocol for GFAP and CD31

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Cleared samples were labeled with staining antibodies using the DeepLabel antibody labeling kit (Logos Biosystems, Annandale, VA, USA). Samples were immersed in solution A at 37°C for 24 hours, incubated with the primary antibodies (1:100 diluted in solution B) at 37°C for 3 days in sealed plate, washed in 1 × PBS for 6 hours with the replacement of fresh PBS every 2 hours. Samples were then incubated with the secondary antibodies (1:100 diluted in solution B) at 37°C for 3 days in sealed plate, washed and stored in 1 × PBS. The primary antibodies include rabbit anti-mouse glial fibrillary acidic protein (GFAP) (Dako-Agilent, Santa Clara, CA, USA) and goat anti-mouse CD31 (pan-endothelial marker) (R&D, Minneapolis, MN, USA). Rabbit isotype control (Abcam, Cambridge MA, USA) and normal goat IgG (R&D) were tested for the immunostaining protocols. The secondary antibodies are Cy3 conjugated donkey anti-rabbit IgG, Cy3 conjugated donkey anti-goat IgG, and FITC conjugated donkey anti-goat IgG (Jackson ImmunoResearch, West Grove, PA, USA).
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7

Immunostaining of Bone Marrow Tissues

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Tissues frozen in OCT were sectioned as described above. Immunohistochemistry was performed using primary mouse antibodies at 1:100 (rat anti–mouse c-Kit (eBiosciences), rat anti–mouse sca-1 (eBiosciences), goat anti-mouse CD31 (R&D System) and rabbit anti-mouse Col1A1 (Millipore antibodies), incubated overnight at 4°C. Sections were incubated for 1 hr at RT with secondary antibodies (Molecular Probes, Carlsbad, CA) diluted 1:1000 then mounted in VectaShield with DAPI (Vector Laboratories, Burlingame, CA) for imaging and analysis. To visualize bone marrow vasculature, cryosections were also stained by using isolectin B4-FITC staining solution (Sigma-Aldrich) diluted in PBLec Buffer (1mM CaCl2, 1mM MgCl2, 0.1mM MnCl2, 1% tritonX100 in PBS). Images were captured with a Zeiss AxioVert 200M microscope and AxioCamMRM camera and AxioVision software (Carl Zeiss MicroImaging, Thornwood, NY).
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8

Corneal Neovascularization Quantification

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The mice were sacrificed on days 7 and 14, and the right eyes were harvested and fixed for 30 minutes at 4 °C in 4% paraformaldehyde. The corneas were separated and blocked with 0.5% Triton X-100 in PBS for 20 minutes at −80 °C and then for 10 minutes at room temperature. Corneas were incubated overnight at 4 °C with goat anti-mouse CD31 (1:20; catalog no. AF3628; R&D Systems, Minneapolis, MN, USA), 2% bovine serum albumin (BSA), 5% normal donkey serum (NDS), and 2% Triton X-100 in PBS. After rinsing in PBS, the corneas were incubated with Alexa Fluor 555-conjugated donkey anti-goat IgG antibody (1:500; catalog no. A-21432; Thermo Fisher Scientific, Waltham, MA, USA) for 2 hours at room temperature. Under the microscope, the corneas were flat mounted on glass slides using mounting medium and coverslips after 3 washes in PBS. In the vehicle control group and the melatonin-treated group, 6 cornea flat mounts were detected at each time point, and in the normal group, a total of 6 corneas were examined. All the flat mounts were captured with a confocal microscope (Carl Zeiss LSM 880, Germany). The degree of CNV was expressed as a percentage of the corneal area by using the confocal microscope built-in software (ZEN 2.3 blue edition, Carl Zeiss Microscopy GmbH, Germany).
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9

Multicolor Immunofluorescence Staining Protocol

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Paraffin sections (30 μm) were cut on a HM355S microtome (Thermo Fisher Scientific) and allowed to adhere to Superfrost Plus slides (Thermo Fisher Scientific). Sections were permeabilized and blocked in PBS containing 0.3% Triton X-100 (Sigma-Aldrich) and 10% FBS followed by staining in the same blocking buffer. The following primary antibodies were used for staining: goat anti-mouse CD31 (1:100, R&D Systems); rabbit anti-mouse LYVE1 (1:200, Novus Biologicals); rabbit anti-cKit (CD117) (1:100, Abcam). The following secondary antibodies were used for staining: Alexa Fluor 647 donkey anti-rabbit IgG (H+L), Alexa Fluor 568 donkey anti-goat IgG (H+L) (Thermo Fisher Scientific). Rabbit anti-mouse Glutamine Synthetase (AbCam) was directly conjugated with Zenon Alexa Fluor 488 Rabbit-IgG.
Stained slides were mounted with Fluorescence Mounting Medium (Agilent Dako) and images were acquired on an inverted Leica microscope (TCS STED CW SP8, Leica Microsystems) with a motorized stage for tiled imaging. To minimize fluorophore spectral spillover, we used the Leica sequential laser excitation and detection modality. The bleed-through among sequential fluorophore emission was removed applying simple compensation correction algorithms to the acquired images. Lif files were imported into Imaris (Bitplane) for background adjustment and exported as tiff images.
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10

Intratumoral OMV Injection Enhances Immune Cell Infiltration

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CT26 tumors were excised 24 h after a single intratumoral injection of 10 μg OMVΔ60 in 50 μL PBS, or PBS alone (50 μL). Tumors were embedded in Tissue-Tek® O.C.T. (Leica, Mannheim, Germany) and rapidly frozen in dry ice. Cryosections of 8 μm in size were obtained from frozen tumors at Cryostat (Leica, Mannheim, Germany). CT26 tumors were stained with primary antibodies for rabbit anti-mouse Caspase 3 (Invitrogen, Waltham, MA, USA), rat anti-mouse NKp46 (Biolegend, San Diego, CA, USA), rat anti-mouse Dendritic Cell marker 33D1 (Biolegend, San Diego, CA, USA), and goat anti-mouse CD31 (R&D System, Minneapolis, MN, USA). Three secondary antibodies were used: donkey anti-rat IgG Alexa Fluor 488 (Invitrogen, Waltham, MA, USA), donkey anti-goat IgG Alexa Fluor 594 (Invitrogen, Waltham, MA, USA) and goat anti-rabbit IgG Alexa Fluor 488. DAPI (ThermoFisher Scientific, Waltham, MA, USA) was used to detect the nuclei. Stained sections were mounted with Dako fluorescence mounting medium (Agilent, Santa Clara, CA, USA) and examined with a Eclipse Ti2 microscope (Nikon, Minato, Tokyo, Japan). Images were analyzed with Fiji for Mac OS X software.
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