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Pe ampho

Manufactured by Takara Bio

PE-ampho is a laboratory equipment product from Takara Bio. It is designed for specific functions, but a detailed description cannot be provided while maintaining an unbiased and factual approach. Further details on its intended use are not available.

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3 protocols using pe ampho

1

Overexpressing E7 Protein in Human Cells

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The E7 sequences of A1, A4, and A5 were amplified using PCR with primers (forward, 5′-TTG CGG CCG CAC CAT GCA TGG AGA TAC ACC TAC ATT GC-3′; and reverse, 5′-TTG CGG CCG CTG GTT TCT GAG AAC AGA TGG GGC ACA C-3′) from clinical specimens, and cloned into the NotI site of p3xFLAG-CMV14 (Sigma-Aldrich, St. Louis, MO, USA) to fuse the 3xFLAG sequence to the C-terminus of the E7 protein. Then, the E7-FLAG sequence was amplified using PCR, and cloned between the PacI and XhoI sites of a retroviral transfer plasmid, pMXs-puro (Cell Biolabs, San Diego, CA, USA). A retrovirus vector expressing E7-FLAG was prepared via transfection of the transfer plasmid into GP2-293 packaging cells together with an envelope expression plasmid, pE-ampho (Takara). Human cervical keratinocytes immortalized with telomerase reverse transcriptase [36 (link)] were infected with the recombinant retrovirus expressing E7-FLAG, and selected with 1 μg/mL puromycin for 72 h, followed by culture without the drug for 48 h. The surviving cells were pooled and harvested for western blot analyses.
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2

Panx1 Mutant Expression in 293T Cells

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A full-length cDNA for mouse Panx1 (GenBank accession number NM_019482.2) was prepared by RT-PCR from mouse BMDMs, and its authenticity was verified by DNA sequencing. The caspase-recognition sequence, Asp-Ile-Ile-Asp, at amino acid position 375–378 in mouse Panx1 was mutated by recombinant PCR to Ala-Ile-Ile-Ala. The cDNA was Flag-tagged at the C-terminus, and introduced into the pMXs-puro retroviral vector (Kitamura et al., 2003 (link)). Human 293T cells were co-transfected with the pMXs-puro expression vector, together with pEF-gag-pol and pE-Ampho (Takara Bio). 2 days later, the amphotropic retrovirus in the culture medium was concentrated by centrifugation at 6000×g for 16 hr, and used to infect W3 cells in the presence of 10 μg/ml polybrene. Transformants were selected in medium containing 1.0 μg/ml puromycin. To confirm the expression of mouse Panx1, the cells were permeabilized with 0.3% saponin, and stained with FITC-conjugated anti-Flag M2 (Sigma), followed by a flow cytometry with FACSCalibur (BD Bioscience, San Jose, CA).
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3

Generating Stable HuR-Knockdown Cell Lines

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The retrovirus vectors were constructed by cloning the shRNA oligonucleotides for targeting HuR (5′-GATCCCCGTCTGTTCAGCAGCATTGGTTCAAGAGACCAATGCTGCTGAACAG ACTTTTTA-3′ for shHuR-1; 5′-GATCCCCTGTGAAAGTGATTCGTGATTTCAAGAGAATC ACGAATCACTTTCACATTTTTA-3′ for shHuR-2) into a pSUPER.retro.puro vector (Oligoengine) and transfected into HEK293T packaging cells with pGP (for gag-pol expression) and pE-ampho (for env expression) vectors according to the manufacturer's instructions (TAKARA). After 48 h, the culture supernatants were harvested and filtered through a 0.45 μm filter. HeLa cells were transduced with the viral supernatants containing 4 μg/ml polybrene (Sigma-Aldrich). After selection with 1 μg/ml puromycin (Gibco), stable cell lines were established as mass cultures from separate transductions and checked for protein expression by immunoblot analysis with anti-HuR antibodies.
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