The largest database of trusted experimental protocols

Nonspecific control sirna

Manufactured by Thermo Fisher Scientific
Sourced in United States, China

Nonspecific control siRNA is a laboratory reagent used to evaluate the effects of small interfering RNA (siRNA) transfection in cell-based experiments. It serves as a negative control, allowing researchers to distinguish between the cellular responses induced by the specific siRNA and any nonspecific effects caused by the transfection process.

Automatically generated - may contain errors

9 protocols using nonspecific control sirna

1

siRNA Knockdown Assays for Cell Invasion

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells were transfected with 20 nM ITGAV- or WASL-specific siRNA, or a nonspecific control siRNA (all from Ambion, Darmstadt, Germany), essentially as previously described [10 (link)]. Knockdown efficiency was confirmed by qPCR and Western blotting. Matrigel invasion chamber assays, quantitative AFM analysis and digital holographic microscopy were performed 72h after transfection.
+ Open protocol
+ Expand
2

Survivin Inhibition in MFH/UPS Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
To assess the effects of survivin inhibition on apoptotic activity and cell proliferation in human MFH/UPS cells in vitro, we performed siRNA transfection with either survivin-siRNA (Ambion Inc., Austin, TX, USA) or non-specific control siRNA (Ambion Inc.) in MFH/UPS cell lines using Lipofectamine™ 2000 Transfection reagent, according to the manufacturer's instructions (Invitrogen, Carlsbad, CA, USA). Efficacy of survivin knockdown was assessed by quantitative real-time PCR (qPCR).
+ Open protocol
+ Expand
3

siRNA Transfection of Colorectal Cell Lines

Check if the same lab product or an alternative is used in the 5 most similar protocols
Small interfering RNA (siRNA) and nonspecific control siRNA were synthesized (Invitrogen Biotech, Shanghai, China). Each sample was analyzed in triplicate and transfected into HCT116 and SW480 cells using Lipofectamine 2000 (Invitrogen, USA) according to the manufacturer's instructions. The siRNA sequences are displayed in Table S2. Every test was carried out in triplicate, with three technical replicates.
+ Open protocol
+ Expand
4

siRNA Transfection and Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Twenty-four hours after cells were plated in six-well plates, the small interfering RNA (siRNA) and nonspecific control siRNA was (Carlsbad, California, USA) transfected into cells using Lipofectamine 2000 (Invitrogen, Shanghai, China), according to the manufacturers' instructions. Sequences of siRNAs are described in Supplementary Table S1 Sheet2. Cells were harvested 48 h after transfection for qRT-PCR and Western blot analysis.
+ Open protocol
+ Expand
5

Evaluating SETDB1 Knockdown Efficiency

Check if the same lab product or an alternative is used in the 5 most similar protocols
The two siRNAs specific for SETDB1 named S5 and S9 and a nonspecific control siRNA were purchased from Invitrogen (Invitrogen, Shanghai, China). The specific siRNA sequences for SETDB1 used in this study were as follows:
S9 sense sequence: 5’-CGUGACUUCAUAGAGGAGU-3’; antisense sequence: 5’-ACUCCUCUAUGAAGUCACG-3;
S5 sense sequence: 5’-GAUCUAUCGAGGCUCUACA-3’; antisense sequence: 5’-UGUAGAGCCUCGAUAGAUC-3’.
An evaluation of the efficiency of the siRNA knockdown experiments was performed. We compared the SETDB1 expression in normal 22RV1 cells cultured for 72 h with S5 and S9 siRNA 72 h post-infected 22RV1 cells and siRNA control post-infected 22RV1 cells. The transfection method and gene expression assay method are the same as those described above.
+ Open protocol
+ Expand
6

HOTTIP Knockdown and Overexpression

Check if the same lab product or an alternative is used in the 5 most similar protocols
To knockdown the HOTTIP expression, the siRNA and non-specific control siRNA were synthesized (Carlsbad, California, U.S.A.) and transfected into cells using Lipofectamine 2000 (Invitrogen, U.S.A.). To overexpress HOTTIP, the full length coding sequence for HOTTIP was amplified and subcloned into the pcDNA 3.1(+) vector (Invitrogen) according to the manufacturer’s instructions. Cells were transfected with a negative control vector or the HOTTIP-expressing plasmid according to the manufacturer’s protocol. Cells were harvested after 48 h for qRT-PCR analyses.
+ Open protocol
+ Expand
7

Silencing MyD88 to Investigate PCV2 Infection

Check if the same lab product or an alternative is used in the 5 most similar protocols
We designed the siRNA to target myeloid differentiation primary response gene 88 (MyD88). The MyD88 siRNA and a non-specific control siRNA were chemically synthesized by Invitrogen (China). The siRNA sequences used were as follows: MyD88, 5'-AUGCCUGAGCAUUUUGAUGTT-3' (sense) and 5'-CAUCAAAAUGCUCAGGCAUTT-3' (antisense); and non-specific control siRNA, 5'-CUGCCCCAGCGAUAUCCAGTT-3' (sense) and 5'-CUGGAUAUCGCUGGGGCAGTT-3' (antisense). PAMs were transfected with 10 nM siRNA using Lipofectamine 2000 (Invitrogen, China) for 24 h and were then inoculated with PCV2 virus after washing twice with PBS buffer. The siRNA dose was optimized in pilot experiments, and no appreciable cellular toxicity was observed.
+ Open protocol
+ Expand
8

Dusp2 silencing in RAW264.7 cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
RAW264.7 cells were treated with siRNA specific to Dusp2 or nonspecific control siRNA (Life Technologies) (Table 1). Cells were transiently transfected in Opti-MEM I medium using Lipofectamine RNAiMAX (Life Technologies). The efficiency of silencing was assessed with PCR 48 h after transfection.
+ Open protocol
+ Expand
9

Dusp2 silencing in RAW264.7 cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
RAW264.7 cells were treated with siRNA specific to Dusp2 or nonspecific control siRNA (Life Technologies) (Table 1). Cells were transiently transfected in Opti-MEM I medium using Lipofectamine RNAiMAX (Life Technologies). The efficiency of silencing was assessed with PCR 48 h after transfection.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!