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4 protocols using mouse monoclonal anti nestin

1

Immunofluorescence Analysis of Rbm8a in RPCs

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RPCs were plated on glass coverslips (VWR, West Chester, PA, USA) coated with laminin (Sigma-Aldrich, Saint Louis, MO, USA) in 24-well plates. Following transfection with miR-29a mimic, miR-29a inhibitor, siRbm8a or Rbm8a clone, cells were fixed with 4% paraformaldehyde (Sigma- Aldrich), and permeabilized with 1% Triton X-100 (Invitrogen) [46 (link)]. Then, The cells were incubated with an optimal concentration of rabbit polyclonal anti-RBM8A antibody (Novus; 1:100), mouse monoclonal anti-nestin (BD, San Jose, CA, USA; 1:200), mouse monoclonal anti-Ki-67 (BD; 1:200), mouse monoclonal anti-β3-tubulin (Chemicon, Billerica, MA, USA; 1:100), mouse monoclonal anti-Rhodopsin (Chemicon; 1:100) or mouse monoclonal anti-glial fibrillary acidic protein (GFAP) (Chemicon; 1:200) overnight at 4°C followed by an incubation with fluorescently labeled secondary antibodies (Alexa Fluor546-goat anti-mouse/rabbit, BD, San Jose, CA, USA; 1:800). After rinsing three times with PBS, nuclei were stained with 4′,6-diamidino-2-phenylindole (Hoechst; Invitrogen, Molecular Probes). Negative control samples were processed in parallel but without the primary antibody. Immunoreactive cells were visualized, and images were recorded using a fluorescence microscope (Olympus BX51, Japan).
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2

Immunofluorescence Staining Protocol

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The antibodies used include: rabbit polyclonal anti-PITPNA (ProteinTech), rabbit polyclonal anti-PITPNB (Hamilton et al., 1997 (link)), rabbit polyclonal anti-GOLPH3 (Abcam), rabbit polyclonal anti-GRASP65 (Abcam), rabbit polyclonal anti-GM130 (Proteintech), rabbit polyclonal anti-GOLGA1 (Cell Signaling), chicken polyclonal anti-GFP (Aves Labs), goat polyclonal anti-GFP (Abcam), rabbit polyclonal anti-mCherry (Abcam), mouse monoclonal anti-Pax6 (Developmental Studies Hybridoma Bank), rabbit polyclonal anti-Tbr2 (Abcam), mouse monoclonal anti-Nestin (BD Biosciences), mouse monoclonal anti-ı-actin (GenScript), rabbit polyclonal anti-activated Caspase 3 (Cell Signaling), and rabbit anti-Ser10-phosphorylated histone H3 (Genscript). Secondary antibodies were from Jackson Immuno Research Laboratories, Inc (West Grove, PA) with minimal species cross reactivity.
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3

Quantitative Protein Analysis of miRNA-Transfected RPCs

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After the transfection of miRNAs into RPCs, the total proteins of the cells were harvested at specified time points. A BCA kit (Pierce, Rockford, IL, USA) and sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) were used to analyze the protein concentrations and separate the proteins, respectively24 (link). Following SDS-PAGE, the proteins were transferred to 0.22 mm polyvinylidene fluoride membranes (Millipore, Billerica, MA, USA). Next, the membranes were blocked with 5% nonfat milk, and they were then incubated with rabbit polyclonal anti-TLX (Santa Cruz Biotechnology, 1:200), mouse monoclonal anti-nestin (BD, 1:500), and mouse anti-β-actin (Sigma, 1:0000) at 37°C for 2 hours. The membranes were next incubated with horseradish peroxidase (HRP)-conjugated secondary antibodies (Sigma, 1:5000). Protein expression images were visualized using Odyssey V 3.0 image scanning (LI-COR, Lincoln, NE, USA). Quantification of the densitometric intensities of the protein bands was performed using the Bandscan 5.0 software, and the values were normalized against β-actin for each sample.
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4

Immunohistochemical Analysis of Neurogenesis

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Frozen 30-μm-thick sections were incubated in blocking solution (10% normal donkey serum or 10% normal goat serum and 0.3% Triton X-100 in PBS, pH 7.5) for 2 h at room temperature (RT) and then incubated with primary antibodies in 5% serum and PBS for 24 h at 4°C. The sections were subsequently incubated for 3 h at RT with fluorophore-conjugated secondary antibodies. To prepare the sections for BrdU staining, they were incubated in 2 N HCl for 0.5 h at 37°C.
Rat monoclonal anti-BrdU (1:100; Abcam, UK) primary antibodies were used to mark proliferating cells, mouse monoclonal anti-Nestin (1:100; BD Pharmingen, USA) primary antibodies were used as a marker for NSCs, and mouse monoclonal anti-NeuN (1:100; Chemicon, USA) primary antibodies were used to label mature neurons. The following secondary antibodies were used: Alexa Fluor 594-labeled donkey anti-rat IgG and Alexa Fluor 488-labeled donkey anti-mouse IgG (1:200 for both; Invitrogen, USA).
The stained slides were dehydrated, cover-slipped in anti-quenching agent (p-phenylenediamine, PPD) and analyzed using a confocal laser-scanning microscope (Olympus, Tokyo, Japan). The number of positive cells was counted in a blinded manner in the ipsilateral SGZ using 20X and 40X objectives in OLYMPUS FV10-ASW Viewer.
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