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1 2 dipalmitoyl sn glycero 3 phosphoethanolamine n lissamine rhodamine b sulfonyl rhod pe

Manufactured by Avanti Polar Lipids
Sourced in United States

1,2-dipalmitoyl-sn-glycero-3-phosphoethanolamine-N-(lissamine rhodamine B sulfonyl) (Rhod-PE) is a fluorescent lipid analog. It contains a rhodamine B fluorescent group covalently attached to the headgroup of a phosphatidylethanolamine lipid.

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2 protocols using 1 2 dipalmitoyl sn glycero 3 phosphoethanolamine n lissamine rhodamine b sulfonyl rhod pe

1

Preparation of Lipid Vesicles for In Vitro Assay

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Synthetic lipid components, including 1-palmitoyl-2-oleoylsn-glycero-3-phosphocholine (POPC), 1,2-dioleoyl-sn-glycero3-(phospho-L-serine) (DOPS), cholesterol (Chol), 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine-N-[methoxy(polyethylene glycol)-5000] (PEG-PE), and 1,2-dipalmitoyl-sn-glycero-3-phosphoethanolamine-N-(lissamine rhodamine B sulfonyl) (Rhod-PE), were purchased from Avanti Polar Lipids (USA). As indicators in the lipid mixing assay, the lipid analog fluorescent dyes DiI and DiD were used as FRET donor and acceptor dyes, respectively (Invitrogen, USA). Chloroform stock solutions were mixed, and the chloroform was removed under vacuum in a desiccator for 16 h. The molar ratio of POPC:DOPS:PEG-PE was 92:7:1, and 10‐5 mol % Rhod-PE was added for the formation of the supported lipid bilayer (SLB). For an in vitro lipid mixing assay, the molar ratio of POPC:DOPS:Chol:DiI (or DiD) was 71:7:20:2. The lipid mixtures were then rehydrated in 25 mM HEPES buffer with 100 mM KCl (pH 7.4), and ten freeze-and-thaw cycles were performed using liquid nitrogen and a water bath at 37°C. The solution was passed through a mini extruder (Avanti Polar Lipids) ten times with a 100 nm polycarbonate filter (Whatman, UK). Next, extrusion was performed to obtain monodisperse unilamellar vesicles using a mini extruder (Avanti Polar Lipids) with a 100 nm polycarbonate filter (Whatman).
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2

Preparation of Fluorescent Lipid Vesicles

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1,2-dioleoyl-sn-glycero-3-phosphocholine (DOPC), brain L-α-phosphatidylinositol-4-phosphate (PtdIns-4-P), 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine-N-(5-dimethylamino-1-naphthalenesulfonyl) (DNS-PE), and 1,2-dipalmitoyl-sn-glycero-3-phosphoethanolamine-N-lissamine rhodamine B sulfonyl (Rhod-PE) were from Avanti Polar Lipids. Dehydroergosterol (DHE) was from Sigma Aldrich. The concentration of the DHE stock solution in methanol was determined by UV-spectroscopy using an extinction coefficient of 13,000 M−1.cm−1.
Lipids, stored in stock solutions in CHCl3 or methanol, were mixed at the desired molar ratios. Solvent was removed in a rotary evaporator under vacuum. For lipid films containing PtdIns-4-P, the mix was pre-warmed to 33°C for 5 minutes prior to drying. The films were hydrated in 50mM Hepes, pH 7.2, 120mM K-acetate (HK buffer) to obtain a suspension of multilamellar liposomes. After five thawing-freezing cycles with liquid nitrogen, the suspensions were extruded through polycarbonate filters of 0.2mm pore size using a mini-extruder (Avanti Polar Lipids). Liposomes were stored at 4°C in the dark when containing light-sensitive lipids (DHE, DNS-PE, Rhod-PE), and used within 2 days.
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