The largest database of trusted experimental protocols

3 protocols using cd137 clone 4b4 1

1

Antigen-Specific T Cell Activation Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cryopreserved PBMCs were thawed and 106 live cells were plated out in 96 well U-bottom plates. Spike protein peptide pool (GenScript, New Jersey, USA), or Chimpanzee Adenovirus Y25 hexon protein peptide pool (JPT Peptide Technologies, Berlin, Germany) was added to each well at 1 μg/mL and cells incubated for 20–24 h at 37°C. For surface staining of AIM markers, cells were incubated in 1 μg/mL human Fc block (BD Biosciences) and fixable viability solution 780 (BD Biosciences) in PBS for 15 min and washed in PBS. An antibody cocktail containing antibodies against CD3 (clone UCHT1, BD Biosciences), CD4 (clone M-T477, BD Biosciences), CD8 (G42-8, BD Biosciences), CXCR5 (J252D4, BD Biosciences), CD38 (HIT2, BD Biosciences), PD-1 (EHI2.1, BD Biosciences), CD69 (clone FN50, BD Biosciences), CD137 (clone 4B4-1, Biolegend), OX40 (clone Ber-ACT35, Biolegend), CCR7 (clone 2-L1-A, BD Biosciences), and CD45RA (clone HI100, BD Biosciences)were added directly to cells and incubated for a further 30 min at 4°C. Following surface staining, cells were washed twice in PBS. All samples were acquired on a BD FACS Symphony and analyzed using FlowJO software v18 (FlowJo, Ashland, USA). The gating strategy for AIM+ T cells is shown in (Methods S3). Data were imported into R v4.2 and visualized with the ggplot2 v3.3.6 package.
+ Open protocol
+ Expand
2

Multiparameter Flow Cytometry for NK Cell Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Flow cytometric data where acquired using a CytoFLEX (Beckman Coulter). Antibodies from Thermo Fisher Scientific were anti-HLA-E (clone 3D12; Thermo Fisher). Antibodies from BioLegend were: anti-pan-HLA class I (clone W6/32), CD3 (clone HIT3a), CD4 (clone RPA-T4), CD8 (clone SK1), CD56 (clone 5.1H11), CD16 (clone 3G8), CD57 (clone HNK-1), KIR2DL2/3 (CD158b, clone DX27), KIR2DL1/S1/3/5 (CD158a,h, clone HP-MA4), CD107a (clone H4A3), CD137 (clone 4B4-1), anti-NKG2D (CD314, clone 1D11), anti-NKp30 (clone P30-15), anti-NKp44 (clone P44-8), anti-NKp46 (clone 9E2). Antibodies from Miltenyi Biotec were anti-NKG2A (CD159a, clone REA110), anti-NKG2C (CD159c, clone REA205). Antibody stainings were performed in PBS (Thermo Fisher Scientific) supplemented with 0.5% BSA (Sigma-Aldrich) and 2 mM EDTA (Sigma-Aldrich), termed MACS buffer. Of note, the clone W6/32 does not recognize the sc-HLA-E due to the covalently linked N-terminus of the incorporated B2M (79 (link)), enabling discrimination between endogenous HLA class I and the sc-HLA-E. Analysis was performed using the CytExpert software (Beckman Coulter) and FlowJo V10.6.2 (Becton Dickinson).
+ Open protocol
+ Expand
3

Comprehensive Immunophenotyping of Engineered T Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cell surface expression of L1CAM (clone REA163, Miltenyi Biotec), GD2 (clone 14.G2a; BD), CD3 (clone Hit3a, BioLegend, San Diego, CA, USA) and CD8 (clone SK1; BioLegend) was detected by fluorophore-conjugated monoclonal antibodies on a Fortessa X-20 (BD Biosciences, Franklin Lakes, NJ, USA) 4-laser flow cytometer. EGFRt expression was detected using biotinylated cetuximab (Bristol-Myers Squibb, New York, NY, USA) and a phycoerythrin (PE)-conjugated streptavidin antibody (cat #12-4317-87, BioLegend). Activation was assessed by fluorophore-conjugated monoclonal antibodies detecting TNFRSF9 (formerly CD137, clone 4B4-1; BioLegend) and IL2RA (formerly CD25, clone BC96; BioLegend). The Annexin V/7-AAD detection kit (BioLegend) was used to assess apoptosis. Dead cells were excluded from analyses using the LIVE/DEAD™ Fixable Green Dead Cell Stain Kit (cat#L23101, Life Technologies). Precision count beads (BioLegend) were used to quantify T cell infiltration according to the manufacturer’s instructions. Flow cytometry data was processed using FlowJo_V10 Software (Tree Star Inc., Ashland, OR, USA).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!