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Ttf 1

Manufactured by Leica
Sourced in United Kingdom, United States

The TTF-1 is a compact, high-performance laboratory equipment designed for precise and efficient analysis. It serves as a versatile tool for various research and diagnostic applications. The core function of the TTF-1 is to provide accurate and reliable measurements, enabling users to obtain consistent and reproducible results.

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4 protocols using ttf 1

1

Immunohistochemical Analysis of NEDD9 Expression

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Immunohistochemistry was performed on 4 µm thick sections by standard protocols with primary antibodies including TTF-1 (Novocastra, Great Britain), CK7 (Dako, Denmark), napsin A (Novocastra, Great Britain), CK5/6 (Dako, Denmark) and p63 (Novocastra, Great Britain).
The NEDD9 monoclonal antibody (Abcam, San Francisco, CA, USA) was used in 1:400 dilution with EnVision kit for visualization. Normal bronchial epithelium present in tumor surroundings was used as negative control. The ‘hot spot’ was determined by inspection on whole specimen at x40 magnification by two investigators blinded for the clinicopathologic data. The immunohistochemical reaction was examined at x400 magnification.
The percentage of NEDD9 positive tumor cells was assessed semiquantitatively, as follows: 0-25% of positive cells scored 0 or negative; 26%-50% as 1 (weakly positive); 51%-75% as 2 (mildly positive); and more than 75% of positive tumor cells as 3 (strongly positive). Positivity was evaluated separately for nuclei and cytoplasm. The intensity of staining was also scored in the range of 0-3 (negative, weakly stained, mildly or strongly stained) (Fig. 1).
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2

Colocalization of Epithelial and Mesenchymal Markers in IPF

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Ethical approval for analysis of archived tissue from control subjects (histologically normal sections obtained from areas remote from tumor at the time of lobectomy for lung cancer) and those fulfilling clinical diagnostic criteria for IPF(1 (link)) was obtained from St. Vincent’s University Hospital Ethics Committee. Immunohistochemical co-localization of epithelial (thyroid transcription factor (TTF)-1 Novocastra Laboratories, Newcastle, UK) and mesenchymal markers (α-SMA), (actin muscle specific HHF35, Cell Marque)) was performed on formalin-fixed paraffin embedded (FFPE) tissue. Staining was performed using the Ventana Benchmark® XT automated staining system according to manufacturers instructions. Cells colocalizing α-SMA with TTF-1 were counted in 4 areas in control and IPF lung tissue, each with over 1000 TTF-1 positive cells at power ×40. In the IPF lung samples, cells were counted in 2 areas of normal appearing lung and 2 areas of subpleural and paraseptal fibrosis, where FF are commonly found. Immunohistochemical of FFPE tissue staining for CXCR3 was performed manually using an anti-CXCR3 antibody (R&D Systems).
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3

Immunophenotyping of Lymph Node Aspirates

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The preparation of FNAB (fine needle aspiration biopsy) lymph node sample, cell counting, sample preparations for flow cytometric immunophenotyping, acquisition of cells with flow cytometer and measurement result analysis were performed as previously described.20 (link) Monoclonal antibodies against CD45, CD19, CD20, CD3, CD10, CD5, CD23, FMC7, κ and λ LCs (BD Biosciences, New Jersey, U.S.) were used. The samples were acquired using a four-colour flow cytometer FACSCalibur (BD Biosciences, New Jersey, U.S.), a six-colour flow cytometer FACSCanto II (BD Biosciences, New Jersey, U.S.) or a ten-colour FACSCanto X (BD Biosciences, New Jersey, U.S.). The measurement results were analysed using CellQuest (BD Biosciences, New Jersey, U.S.) or BD FACSDiva software (BD Biosciences, New Jersey, U.S.). For immunocytochemical staining, methanol and Delaunay-fixed cytospines were prepared. Stainings were carried out on the Ventana Benchmark Ultra platform using antibodies against CD56, CK AE1/AE3, CK18 (DAKO), CD20 (Cell Marque, Rocklin, California, U.S.), synaptophysin (Termo Scientific, Waltham, Massachusetts, U.S.), CD3 and TTF-1 (Leica Biosystems, Nussloch, Germany).
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4

Immunohistochemical Profiling of Neuroendocrine Tumors

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Unstained sections (4 mm) of the local cases were cleared and deparaffinized. Slides were processed using the BenchMark ULTRA Autostainer (Ventana Medical Systems) with 24 minutes cell conditioning one antigen retrieval at 100 C. Slides were incubated with CDX2 (Clone EPR2764Y, catalog no., ILM2353-C1, 1:200; Immunologic) and TTF1 (Clone SPT24, RRID: AB_442138, 1:60; Leica Biosystems) at 36 C for 32 minutes, and visualized with Optiview DAB (Ventana Medical Systems). Islet-1 IHC was performed manually. Briefly, peroxidase activity was blocked with 0.6% H 2 O 2 in methanol. Slides were cooked in 10 mmol/L citrate (pH 6) buffer for 20 minutes. After applying Pierce Protein-Free Blocking Buffer (Thermo Fisher Scientific), slides were incubated with Islet-1 antibody (Clone EP283, catalog no., 431R-15, 1:400, Cell Marque) in Normal Antibody Diluent (Immunologic) at 20 C for 60 minutes. The signal was amplified using the BrightVisionþ Poly-HRP-Anti Mouse/Rabbit IgG Biotin-free Kit (Immunologic), and detected with Bright-DAB (Immunologic) for 8 minutes. Slides were counterstained with hematoxylin. Scoring was performed in consensus by a neuroendocrine tumor researcher (W.M. Hackeng) and an experienced neuroendocrine tumor pathologist (L.A.A. Brosens).
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