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10 protocols using xylene

1

Immunohistochemical Analysis of Ki-67

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The specimens were fixed using 10% formalin (Solarbio, China) and embedded in the paraffin wax (Solarbio, China) followed by slicing. After deparaffinization using xylene (Solarbio, China) and rehydration by ethanol (Solarbio, China). The primary antibody against Ki-67 (Beyotime, China) was applied and incubated at 4°C for 16 h. The DAB Histostaining kit (Solarbio, China) was selected to localize Ki-67 in clinical tissues.
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2

Cresyl Violet Staining of Brain Tissues

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Paraffin-embedded tissues being sectioned and deparaffinized, were then stained with 30 μl of 1% cresyl violet solution (Solarbio, Beijing, China) in a wet incubator for 9 min. After washes with distilled water, Nissl Differentiation solution was added onto the sections for 2 min. Subsequently, 95% ethanol was added for swift differentiation until Nissl bodies were purple and other tissues were colorless. Finally, specimens were dehydrated by absolute ethyl alcohol (Tianjin Youpu Chemical Reagent Co., Ltd., Tianjin, China), transparentized by xylene (Solarbio, Shanghai, China) and sealed by neutral gum (Biosharp, Shanghai, China). Images of the brain tissues were captured using a light microscope (Leica, Solms, Germany).
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3

Hematoxylin-Eosin Tissue Staining

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First, the sections were dewaxed. Afterward, the sections were soaked in hematoxylin (Beijing Solarbio Science & Technology Co., Ltd., Beijing, China) for approximately 5 min and stained with eosin (Beijing Solarbio Science & Technology Co., Ltd., Beijing, China) for 3 min. The sections were dehydrated in an increasing gradient of alcohol (70%, 80%, 90%, 95%, 100%) and xylene (Beijing Solarbio Science & Technology Co., Ltd., Beijing, China), cleared, and subsequently sealed with neutral gum (Beijing Solarbio Science & Technology Co., Ltd., Beijing, China) for preservation.
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4

Nissl Staining of Rat Hippocampal Tissue

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Paraffin‐embedded rat hippocampal tissue sections were dewaxed and stained with 1% toluidine blue solution (Solarbio) for 10 min. Then, after washing with distilled water, Nissl differentiation solution was added dropwise to the tissue sections for 2–4 min. Subsequently, 95% ethanol was added for rapid differentiation, and after the Nissl changed to purple and the other tissues became colorless. The sections were dehydrated with anhydrous ethanol (Solarbio), transparent with xylene (Solarbio), and finally sealed with neutral glue (Solarbio) to seal the sections. Images were captured using an optical microscope (Olympus).
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5

Purifying Proteins and Nucleic Acids

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Nucleic acid purification kits were purchased from Huashun Biological Engineering Co., Ltd., Shanghai, China. Restriction enzymes, PCR Ladder Marker, Taq DNA polymerase, pfu Taq, Buffer, and dNTPs were purchased from Nanjing Genescript Co.Ltd. Trizol kits were purchased from Invitrogen. Chelating Sepharose Fast Flow, SP Sepharose Fast Flow were purchased from GE Life Sciences. Indomethacin, carrageenan and xylene were purchased from Solarbio. Plasmid pSYPU-1b, E. coli strain DH5α, E. coli strain BL21, PVDF membrane (Merk Millipore, Billerica, MA), anti-Nav1.7 (1:500, Abcam), anti-Nav1.8 (1:500, Abcam), anti-β-actin (1:2000, Abcam), ELISA kits were purchased from Baolai Biotechnology (Jiangsu, China).
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6

Histological Analysis of Femur Bone

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Right femurs were fixed with 4% paraformaldehyde (Solarbio, Beijing, China) for 7 days, and decalcified, dehydrated, embedded in paraffin, cut into 5-μm sections, and then deparaffinized by xylene (Solarbio, Beijing, China) together with ethanol (in the following order: 100, 95, 90, 80, 70%). The sections were immersed in distilled water, and hematoxylin-eosin staining (Baso, Zhuhai, China) was performed according to the protocol. Bone trabeculae were observed under a microscope (Carl Zeiss, Germany), and bone cavity volume ratio was measured by Image-Proplus5 (IPP).
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7

Histological Analysis of Mouse Ovaries

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Immediately after mice were sacrificed, the bilateral ovaries were dissected and fixed in 75% alcohol for 5 min. In the ultra‐clean table, cut the abdominal wall, take out the bilateral ovaries, quickly put them into a 35‐mm Petri dish containing PBS (preheated at 37°C), fix them with 4% paraformaldehyde (Solarbio). After 24 h of fixation, increasing concentrations of ethanol dehydrated the ovarian tissue, xylene (Solarbio, Beijing, China) clarified the ovarian tissue, and the tissues were paraffin‐embedded. The paraffin was sectioned (4 μm thick) for hematoxylin and eosin staining to observe the morphological structure of the mouse ovaries under an optical microscope.
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8

Hematoxylin and Eosin Staining Protocol

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Hematoxylin and eosin (H&E) staining was performed as previously described (15 (link),16 (link)). To deparaffinize the paraffin sections, slides were submerged for 5 min in a slide jar filled with xylene (Sinopharm Chemical Reagent Co., Ltd.), repeating this procedure twice and using fresh xylene each time. Subsequently, sections were rehydrated by running slides through a series of decreasing concentrations of EtOH (Sinopharm Chemical Reagent Co., Ltd.). Hematoxylin (Shanghai Jingke Chemical Technology Co., Ltd.) was used to stain the tissues for 5 min at room temperature, and after washing with tap water, differentiation in staining was visualized by submerging for 30 sec in 1% acetic acid. To visualize the blue staining, the sections were rinsed under running tap water for 5 min, after which the slices were dyed in eosin solution (Shanghai Jingke Chemical Technology Co., Ltd.) for 2 min at room temperature. After dehydration with EtOH and transparency with xylene, the slices were sealed with neutral balsam (G8590-100; Solarbio). Finally, tissues were imaged under an electron microscope (400x magnification; OLYMPUS CX-21; Shanghai Xinyu Biotechnology Co., Ltd.).
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9

Detailed Mouse Lung Tissue Analysis

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Aluminum hydroxide [Al(OH)3, alum] was provided by Waltham, USA. OVA, acetyl-β-methyl choline chloride (methacholine), and phosphate-buffered saline (PBS) were purchased from Sigma, United States. Reagents utilized in lung tissue staining (hydrochloric ethanol, masson bluing solution, masson ponceau s staining solution, phosphomolybdic acid solution, aniline blue, paraformaldehyde, xylene, hematoxylin, eosin, periodic acid, and fuchsin basic) were provided by Solarbio Life Sciences (Beijing, China). RIPA buffer, TBST buffer solution, primary antibody dilutions, secondary antibody dilutions, antibody eluent, and goat anti-rabbit IgG labeled with horseradish peroxidase were supplied by Servicebio Biology (Wuhan, China). Antibodies against phosphatidylinositol3 kinase (PI3K, cat.4691T), phospho-PI3K (P-PI3K, cat.17366S), RAC-α serine/threonine-protein kinase (AKT, cat.4691T), phospho-AKT (P-AKT, cat.4060T), and glyceraldehyde-3-phosphate dehydrogenase (GAPDH, cat. 2118T) were purchased from Cell Signal Technology (Beverly, MA, United States).
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10

Immunohistochemical Analysis of Ki-67 and ASCT2

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Paraffin sections were incubated with Xylene (Solarbio) for 25 min for dewaxing. They were then hydrated with alcohol, eluted with PBS and placed in sodium citrate buffer (Solarbio) for antigen repair. The sections were blocked with goat serum (Solarbio) and incubated with primary antibodies of ki‐67 (ab15580, 1:1000, Abcam) and ASCT2 (ab237704, 1:1600, Abcam) at room temperature for 1 h. Then, DBA color developer (Solarbio) and hematoxylin (Solarbio) were added to these sections for 2 min. After that, the slices were sealed by dehydration and observed under a microscope.
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