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8 protocols using caki 2

1

Human Renal Cancer Cell Culture

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In this study, we used two human CCRCC cell lines. Caki-1 and Caki-2 cells were purchased from the Korean Cell Line Bank (KCLB, Seoul, Korea). The Caki-1 and Caki-2 cells were cultured in DMEM medium with 10% fetal bovine serum (Gibco BRL, Gaithersburg, MD) and streptomycin and penicillin (100 U/ml) in 5% CO2 and 37°C.
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2

Renal Cancer Cell Viability Assay

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Renal cancer cell lines (Caki-1, Caki-2, A498) were obtained from the Korean Cell Line Bank (Seoul, Korea) and American Type Culture Collection (Manassas, VA, USA), and cultured in McCoy’s 5A and RPMI1640 supplemented with 10% fetal bovine serum. VHL-null RCC4 cell lines were kind gift from Dr. Jong-Wan Park [38 (link)], and cultured in Dulbecco’s modified Eagle’s medium (DMEM) supplemented with 10% fetal bovine serum. Cells were incubated in a humidified atmosphere at 37 °C under normoxia (20% O2 and 5% CO2) or hypoxia (1% O2 and 5% CO2). Cell viability assay was performed using crystal violet staining [39 (link)]. Briefly, cells were cultured in 24-well tissue culture dishes with or without drug treatment. After incubation with drugs, washed cells were fixed using 4% paraformaldehyde, and then stained with 0.5% crystal violet solution for 20 min at room temperature. Optical density of crystal violet was analyzed using 1% SDS solution and measured by an absorbance reader (BioTek, Winooski, VT, USA) (OD570).
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3

Culturing Human Renal Cell Carcinoma Lines

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The human RCC cell lines used in this study, ACHN, A498, A704, Caki-1, Caki-2, SN12C, SNU-1272, and SNU4600, were purchased from the Korean Cell Line Bank (Seoul, Korea). ACHN, A498, A704, Caki-1, Caki-2, and SN12C cell lines were cultured in Dulbecco’s modified Eagle medium supplemented with 10% heat-inactivated fetal bovine serum (FBS; Gibco, Waltham, MA, USA) and 10 µg/ml gentamicin (Gibco). SNU-1272 and SNU-4600 cell lines were cultured in RPMI 1640 medium supplemented with 10% heat-inactivated FBS and 10 µg/ml gentamicin.
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4

Cultivation of Kidney Cancer Cell Lines

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The ACHN, SN12C, Caki-1, and Caki-2 cell lines were obtained from the Korean Cell Line Bank (Seoul, Korea) and American Type Culture Collection (ATCC, Manassas, VA, USA). All kidney cancer cells were grown in Dulbecco's modified Eagle's medium (DMEM) (Hyclone, Logan, UT, USA) supplemented with penicillin (100 U/mL), streptomycin (100 mg/mL), and 10% fetal bovine serum (FBS) and incubated at 37℃ in a humidified atmosphere containing 5% (v/v) CO2.
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5

Culturing ccRCC Cell Lines

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The human ccRCC cell lines SNU1272, Caki-2, SN12C and SNU482 were purchased from the Korean Cell Line Bank (Seoul, Korea). SNU1272 and SNU482 were maintained in RPMI1640 (Welgene, Daejeon, Korea), supplemented with 10% fetal bovine serum (FBS) and 1% penicillin/streptomycin (P/S). Caki-2 and SN12C were maintained in Dulbecco’s Modified Eagle’s Medium (DMEM; Welgene, Daejeon, Korea) supplemented with 10% FBS and 1% P/S, respectively. Cells were cultured at 37 °C under 5% CO2 and 95% relative humidity.
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6

Culturing Diverse Renal Cell Carcinoma Lines

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The human RCC cell lines Caki-1, Caki-2, 786-O, A498, and ACHN were purchased from Korean Cell Line Bank (Seoul, Republic of Korea). The immortalized human chRCC cell line UOK-276 was kindly provided by Dr. W. Marston Linehan (National Cancer Institute, Bethesda, MD, USA). Cell lines were cultured in RPMI-1640 or DMEM (Sigma-Aldrich, St. Louis, MO, USA) containing 10% fetal bovine serum (FBS; Sigma-Aldrich) and 1% antibiotic-antimycotic (Thermo-Fisher Scientific, Waltham, MA, USA). All cells were maintained in an incubator designed to maintain a 5% CO2 atmosphere, constant temperature, and humidity suitable for cell growth.
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7

Culturing Kidney and Renal Cancer Cells

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Human kidney proximal tubule cells (HK-2) and RCC cells (Caki-1, Caki-2, SNU-333, SNU-349, and SNU-1272) were purchased from the Korean Cell Line Bank, and cultured according to the supplier’s protocol. HK-2, SNU-333, SNU-349, and SNU-1272 cells were cultured in RPMI-1640 medium, and Caki-1 and Caki-2 cells were cultured in DMEM/high glucose. All media were from Welgene and contained 10% fetal bovine serum and 1% penicillin-streptomycin. The cells were grown in monolayers at 37 °C in a 5% CO2 incubator unless otherwise described.
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8

Kidney Cell Line Characterization and Pharmacological Inhibition

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HK-2 (#22190, a normal kidney cell line), Caki-1 (#30046), Caki-2 (#30047), SN12C (#80025), and ACHN (#21611) cells were obtained from the Korean Cell Line Bank (Seoul, Korea). Two RCC cell lines with lower SAMHD1 expression were used for SAMHD1 overexpression experiments, and two other RCC cell lines with higher SAMHD1 expression were used for SAMHD1 knockdown experiments. HK-2 cells were grown in RPMI 1640, and the other cells were grown in Dulbecco’s modified Eagle’s medium (DMEM) with 10% fetal bovine serum (FBS) and 1% penicillin/streptomycin in a humidified atmosphere of 5% CO2 at 37 °C. PF573228 (#PZ0117) and fasudil (#CDS021620) were purchased from Sigma‒Aldrich (St. Louis, MO, USA). NSC23766 (#S8301), ML141 (#S7686), and Dynasore (#S8047) were obtained from Selleckchem (Houston, TX, USA).
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