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11 protocols using fitc anti gr 1

1

Quantifying IFN-γ-secreting CD8+ T Cells

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Antibodies used in the current study were Anti-CD11b PE (eBioscience M1/70)/APC (BD,M1/70), anti-GR-1 FITC (BD RB6-8C5), anti-Ly6G FITC (RB5-8C5) APC (RB5-8C5), anti-Ly6C PreCP-Cr™5.5 (BD AL-21), anti-IL10 FITC (BD), anti-IL12 (P40/P70) (BD), anti-p-Stat3 PE (BD PY705), anti-NOS2 PE (eBioscience CXNFT), arginase FITC (R&D), anti-CD8 PE (BD), anti-IFNγ FITC (BD).
The numbers of IFN-γ-secreting CD8+ T cells were analyzed by flow cytometry after adding Golgi plug (1 μg/mL, BD Pharmingen) for 8 hours. Analysis was performed on a Becton-Dickinson FACScan with CELLQuest software (Becton-Dickinson Immunocytometry System, Mountain View, CA) and Flowjo 10 software.
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2

Splenic Immune Cell Profiling

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At the time of sacrifice, spleens were collected and single-cell suspensions were prepared from each animal. Samples were stained with anti-CD3-Alexa 700, anti-CD4-PB, anti-Gr-1-FITC, anti-B220-PerCP (BD Bioscience, San Jose, CA), anti-CD8-PO (Life Technologies, Carlsbad, CA), anti-NK1.1-APC-Cy7, anti-CD69-PE (Biolegend, San Diego, CA), anti-CD11b-APC, and anti-CD11c-PE-Cy7 (eBioscience, San Diego, CA). CountBright absolute counting beads (Life Technologies) were added to cell suspensions and were used according to manufacturer’s instructions to determine absolute cell counts. Samples were run on an LSR II flow cytometer (BD Biosciences). Resulting flow cytometry standard files were analyzed using FlowJo software (version 10.0.7, TreeStar, Ashland, OR).
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3

Comprehensive Immunophenotyping by Flow Cytometry

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Flow cytometry analysis was performed as previously described [28 (link), 30 (link)]. Samples were measured on a FACSCalibur or FACSCanto II (BD Bioscience, Franklin Lakes, USA) and analyzed with FlowJo (Tree Star, Ashland, USA). Dead cells were identified by using a Zombie Aqua™ Fixable Viability Kit (Biolegend, San Diego USA). Doublets were excluded in every analysis. Samples were stained with anti-sca1-APC (R&D Systems, Minneapolis, USA) anti-flk-1-PE (BD Bioscience, Franklin Lakes, USA), anti-B220-APC (BD Bioscience, Franklin Lakes, USA), anti-IgM-Per-CP/Cy5.5 (BD Bioscience, Franklin Lakes, USA), anti-CD11b-APC/Cy7 (BD Bioscience, Franklin Lakes, USA), anti-CD5-PE (BD Bioscience, Franklin Lakes, USA), anti-sca1-FITC (BD Bioscience, Franklin Lakes, USA), anti-flk1-PE-Cy7 (BD Bioscience, Franklin Lakes, USA), anti-CD3-FITC (BD Bioscience, Franklin Lakes, USA), anti-CD4-PE/Cy7 (eBioscience, Waltham, USA), anti-CD8-APC (Biolegend, San Diego, USA), anti-sca1-PerCP/Cy5.5 (eBioscience, Waltham, USA), anti-CD11b-PE (BD Bioscience, Franklin Lakes, USA), anti-CD115-APC (Biolegend, San Diego USA), anti-Gr1-FITC (BD Bioscience, Franklin Lakes, USA) and anti-CD45 FITC (BD Bioscience, Franklin Lakes, USA).
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4

Multiparametric Flow Cytometry Analysis

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Spleen and inguinal lymph node (LN) cells were harvested from immunized mice at the time of sacrifice. Joint tissues were minced and treated with collagenase (0.25 mg/ml), and joint cell populations were examined for surface markers using antibodies anti-CD4-AF700, anti-CD8a-PE-Cy7, anti-CD19-PE, anti-CD11b-Pacific Blue, anti-CD11c-APC-Cy7, anti-F4/80-APC, and anti-GR-1-FITC (BD Pharmingen, San Jose, CA, USA). For intracellular cytokine staining, cells were stimulated with Phorbol 12-myristate 13-acetate (25 ng/ml) and ionomycin (500 ng/ml) (Sigma-Aldrich) and treated with GolgiPlug (BD Pharmingen) for 4 hours. After cell surface staining with anti-CD3e-PE-Cy7 and anti-CD4-APC-Cy7, cells were permeabilized using the Cytofix/Cytoperm Plus kit (BD Pharmingen) and stained with anti-IFNγ-APC and anti-IL-17A-FITC. A BD LSRII cytometer was used for cytometry and data were analyzed using BD FACS Diva Software.
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5

Neutrophil Progenitor Characterization

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Staining for cellular and nuclear morphology was performed on cytospins from cultures of progenitors or differentiated neutrophils by incubating with Giemsa solution (Merck, Darmstadt, Germany) after methanol fixation. Analysis by brightfield microscopy was performed using a Keyence BZ9000 microscope at a magnification of x40 (Keyence, Neu-Isenburg, Germany).
Expression of cell surface markers was measured by staining cells with anti-Gr-1-FITC (BD Biosciences, San Jose, CA, USA), anti-CD11b-APC (eBioscience, San Diego, CA, USA), anti-c-kit-APC (eBioscience) or anti-CXCR2-APC (Biolegend, San Diego, CA, USA) followed by flow cytometry analysis on a FACS Calibur (BD Biosciences, Heidelberg, Germany).
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6

Flow Cytometry Analysis of Tumor Immune Cells

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After being harvested and weighed, tumor tissues were cut into small pieces and mixed with IV collagenase for 2 h. Tissues were homogenized and filtered through a 70 μm filter to remove remaining undigested tissue. The single cell suspension was centrifuged at 500 g for 5 min, incubated with 2 μl extracellular antibody for 30 min, and then fixed with 4% paraformaldehyde for 20 min. Finally, the suspension was incubated with intracellular antibody for another 30 min before being tested by flow cytometry (NovoCyte, ACEA Biosciences, San Diego, USA). APC-Anti-CD4 (#553051), PE-Cy7-anti-CD25(#552880), PE-anti-FOXP3(#563101), PE-Cy7-anti-CD11b (#552850) and FITC-anti-Gr-1(#553126) were purchased from BD pharmingen™.
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7

Antibodies and Reagents for DNA Damage Response

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The anti‐α‐tubulin antibody, aphidicolin, and nocodazole were purchased from Sigma‐Aldrich. The anti‐p‐ATM (Ser1981), cGAS, and GFP antibody were from Santa Cruz. Antibodies against ATM, Flag, mouse cGAS, human cGAS, STING, MRE11, PARP1, H2A, H2A.X, γ‐H2A.X p‐IRF3, and IRF3 were from Cell Signaling Technology; Alexa 488‐anti‐Sca‐1 was from Invitrogen and PECY7‐anti‐cKit; V450‐Ly6G and FITC‐anti‐GR1 were from BD Pharmingen; 2′,3′‐cGAMP and immunostimulatory DNA (ISD) were from InvivoGen; and ATP was from New England Biology, while GTP, Rad51, and Lamin B1 antibody were from Abcam.
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8

Flow Cytometry Analysis of Murine and Human Immune Cell Markers

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The following conjugated anti-murine antibodies were used for flow cytometry: FITC-anti-CD45.1 (A20, #11-0453), FITC-anti-CD9 (MZ3, #11-0091), PE-Cy7-anti-CD45.2 (104, #12-0454), PE-anti-CD127 (A7R34, #12–1,271), efluor450-anti-CD19 (eBio1D3, #48-0193), efluor-anti-CD45.2 (104, #48-0454), PECy7-anti-CD117 (2B8, #25–1,171), efluor-anti-CD34 (RAM34, #50-0341; eBioscience); APC-Cy7–anti-B220 (RA3-6B2, #103224), APC-anti-CD22 (OX-97, #126110), PE-Cy7-anti-CD93 (AA4.1, 136506; Biolegend); PE-anti-CD22 (Cy34.1, #553384), APC-anti-CD11b (M1/70, #553312), PE-anti-BP1 (BP-1, #553735), FITC-anti-GR1 (RB6-8C5, #553127; BD Biosciences). CAR detection was performed using protein-L with PE-Streptavidin (BD Biosciences). The following conjugated anti-human antibodies were used: efluor45-anti-CD19 (HIB19, #48-0199), FITC-anti-CD19 (HIB19, #11-0199)), efluor-anti-CD34 (4H11, #48-0349), PE-Cy7-anti-CD11b (ICRF44, #25-0118), FITC-anti-CD14 (61D3, #11-0149), APC-anti-CD117 (104D2, #17–1,178), PE-anti-CD33 (WM-53, #12-0338), PerCP-Cy5.5-anti-CD45 (HI30, #45-0459; eBioscience); PE/Cy7-anti-CD10 (H110a, #312214, Biolegend); PE-anti-CD22 (S-HCL1, #347577) and PE-anti-HLA-DR (G46-6 #556644; BD Biosciences). Samples were analysed on a BD LSR-Fortessa (BD Biosciences), data collected using FACS Diva software and analysed using FLowJo version 9.6.4 (Treestar).
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9

Multilineage Blood Cell Analysis

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For analysis of multilineage blood cells, FITC‐Anti‐GR‐1 (BD), FITC‐Anti‐CD45R/B220 and FITC‐Anti‐CD11b antibodies were used for the test of the peripheral blood. And the proportion of positive marked cells was measured on a flow cytometer (BD Accuri™ C6 Plus).
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10

Multiparameter Flow Cytometry Analysis

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Splenocytes were stained with FITC-anti-Gr-1, PE-anti-CD11b PE-Cy7-anti-CD11c, PerCP-Cy5.5-anti-CD3 (BD Pharmingen, USA) and APC-anti-Ly6G, PE-Cy7-anti-Ly6C, APC-anti-F4/80, and APC-anti-I-Ab (Biolegend, USA) antibodies. For intracellular cytokines staining, DLN cells and PBMC were stimulated with 50 ng/ml phorbolmyristate acetate (PMA) plus 500 ng/ml ionomycin (both from Sigma, USA) for 5 h in the presence of 10 μg/ml brefeldin A (eBiosciences, USA). Cells were fixed, permeabilized, and stained with PE-anti-IL-17A (BD Pharmingen, USA) after staining with FITC-anti-CD4 antibodies. To analyze the frequency of Foxp3+regulatory T cells (Treg) in DLN, after stained with FITC-anti-CD4 and PE-anti-CD25 (eBioscience, USA) antibodies, cells were fixed, permeabilized, and stained with PE-Cy5-anti-Foxp3 antibody (eBioscience, USA). Data were acquired using Beckman flow cytometer (USA).
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