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7 protocols using primescript rt pcr reagent kit

1

Quantifying Gene Expression in Arabidopsis

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Total RNAs were extracted from 2-week-old plants of the wild-type and atmyb44 mutant plants using the RNAiso Plus reagent from Takara (Otsu, Japan). The cDNA was synthesized from 1 μg of total RNAs with PrimeScript RT-PCR reagent Kit of Takara. qRT-PCR was performed using the CFX96 real-time PCR detection system from Bio-Rad Laboratories (Hercules, CA, USA) and SYBR Premix Ex Taq II from Takara (Otsu, Japan). The relative expression levels were calculated using the ΔΔCt method [43 (link)], which was normalized against the expression level of ACTIN2/8. For all qRT-PCR analyses, three technical replicates and three independent biological repetitions were performed. Statistical significance was assessed by Student’s t-test. Values of p < 0.05 were considered significant. Primers used for this assay are listed Table S2.
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2

Quantifying Inflammatory Markers in HUVECs

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HUVECs were pretreated with cholesterol or 7-ketocholesterol for 18 h, followed 0.1 ng/ml TNF-α for an additional 2 h. Total RNA was isolated with an RNeasy mini column kit (Qiagen, Hilden, Germany). RNA purity and concentration were determined by measuring the absorbances at 260 and 280 nm, respectively. cDNA was produced from 0.5 μg of RNA using a PrimeScript RT-PCR reagent kit (TAKARA BIO Inc., Kyoto, Japan). Real-time quantitative RT-PCR to quantitate the mRNA expression of IL-8, MCP-1 and 18rs in HUVECs was performed using a Thermal Cycler Dice (TAKARA BIO Inc., Kyoto). Quantitative RT-PCRs used a KAPA SYBR® FAST universal qPCR Master Mix (2x) kit (Sigma-Aldrich) with 18rs as an internal control.
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3

ABA-responsive Gene Expression Analysis

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Two-week-old seedlings were incubated in liquid MS medium with or without 50 μM ABA for 3 h. Total RNAs was extracted using the RNAiso Plus reagent from Takara (Otsu, Japan). The cDNAs were synthesized from 1 μg of total RNAs using the PrimeScript RT-PCR reagent Kit of Takara. qRT-PCR was performed using the Bio-Rad CFX96 real-time PCR detection system and SYBR Premix Ex Taq II from Takara. ACTIN2/8 was used as an internal control. RT-PCR was conducted with the gene-specific primers described by Zhang et al. (2018) (link).
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4

RT-PCR Analysis of Gene Expression

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Total RNA was extracted from treated and untreated cultures using TRIzol reagent
according to the manufacturer's protocol (Invitrogen). First-strand cDNA was
synthesized using the PrimeScript RT-PCR reagent kit (Takara, China), according to
the manufacturer's instructions. The specific primers used for RT-PCR are shown in
Table 1. β-actin was amplified as an
internal control for normalization. PCR products were separated on 1.5% agarose gels
and visualized by ethidium bromide staining (19 (link)), and the images were analyzed by the GEL DOC 2000 system (Bio-Rad,
USA), where relative expression level (%) equaled gene band density divided by
β-actin band density.
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5

Real-Time PCR and RT-PCR Analysis of Gene Expression

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Total RNA was isolated from indicated cells using TRIzol reagent (Takara Bio, Dalian, China) and subsequently used for reverse transcription with a PrimeScript RT‐PCR reagent kit (Takara Bio). cDNA was subjected to real‐time quantitative polymerase chain reaction (RT‐qPCR) with an SYBR Green PCR kit (Takara Bio) on an ABI7500 Real‐time PCR system (Applied Biosystems, Inc., Austin, TX, USA). The primer sequences used in this study were shown as follows: SF3B1‐F, 5′‐GTGGGCCTCGATTCTACAGG‐3′; SF3B1‐R, 5′‐GATGTCACGTATCCAGCAAATCT‐3′; PPP2R5A‐F, 5′‐AGAGCCCTGATTTCCAGCCTA‐3′; PPP2R5A‐R, 5′‐TTTCCCATAAATTCGGTGCAGA‐3′; Myc‐F, 5′‐GTCAAGAGGCGAACACACAAC‐3′; Myc‐R, 5′‐TTGGACGGACAGGATGTATGC‐3′; ACTB‐F, 5′‐ACTCGTCATACTCCTGCT‐3′; ACTB‐R, 5′‐GAAACTACCTTCAACTCC‐3′. The 2‐ΔΔCt method was used to calculate the relative expression of target genes. The ACTB gene was used as an internal control. For reverse transcriptase polymerase chain reaction (RT‐PCR), the primers used in this study were shown as follows: PPP2R5A‐F, GCCTAGCATTGCAAAACGAT; PPP2R5A‐R, GCAATGCAAAGCCATTGATA.
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6

Quantitative Gene Expression Analysis

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Total RNA was extracted from treated and untreated cultures using TRIzol reagent according to the manufacturer's protocol (Invitrogen). First-strand cDNA was synthesized using the PrimeScript RT-PCR reagent kit (Takara, China) according to the manufacturer's instructions. The specific primers used for BMP-2 were reverse primer, 5′-TCTCTGTTTCAGGCCGAACA-3′ and forward primer, 5′-TCTGACTGACCGCGTTACTC-3′. β-Actin was amplified as an internal control for normalization. PCR products were separated on 1.5% agarose gels and visualized by ethidium bromide staining, and the images were analyzed by the GEL DOC 2000 system (Bio-Rad, USA), where relative expression level (%) equaled gene band density divided by β-actin band density.
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7

Quantitative Analysis of PTPRH Expression

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According to the manufacturer's protocol, total RNA was extracted from tissue samples by using Trizol (Invitrogen, Carlsbad, CA) and then converted to cDNA by PrimeScript RT-PCR reagent kit (Takara, Japan). Quantitative analysis was performed on ABI 7500 Real-Time PCR system (Applied Biosystems, USA) using SYBR Green Master Mix (Takara, Japan). Primer sequences are shown below: PTPRH: forward primer: GGCGGCACAACAGAGACTC, reverse primer: CTGTGGCAGTAGTGACAGTCC; GAPDH: forward primer: GGAGCGAGATCCCTCCAAAAT, reverse primer: GGCTGTTGTCATACTTCTCATGG. The relative expression of PTPRH was quantified by using the 2-Δ∆Ct method. The experiment was conducted in triplicate.
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