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3 protocols using nitrocellulose membrane 162 0115

1

Immunoprecipitation and Western Blot Analysis

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Cells were lysed in 50 mm Tris-HCl (pH 8.0), 150 mm NaCl, 5 mM EGTA (pH 8.0), 50 mm NaF (pH 8.0), 10% glycerol, 1.5 mm MgCl2, 1% Triton X-100 containing protease and phosphatase inhibitors (complete EDTA-free; Roche Applied Science, Mannheim Germany) and protein concentrations determined by Bradford method. One milligram of cell lysates, after preclearing with protein A-sepharose (GE Healthcare, Little Chalfont, Buckinghamshire, UK), was incubated with 5 μg of anti-EZH2 (sc-25383), anti-Snail (sc-28199; Santa Cruz Biotechnology Inc., Santa Cruz, CA, USA) or rabbit immunogobulin G (IgG) 12-370 (Millipore Corp., Bedford, MA, USA). The complexes were incubated for 2 h with protein A-sepharose. Immune complexes were washed, eluted and denatured in Laemmli buffer. Proteins from either cell lysates or immunoprecipitation were resolved on sodium dodecyl sulfate–polyacrylamide gel electrophoresis and transferred to nitrocellulose membrane (162-0115; Bio-Rad Laboratories). Blots were probed with primary anti-EZH2 05-1319 (Millipore Corp.) or anti-Snail L70G2 (Cell Signaling Technology Inc., Danvers, MA, USA) and immune complexes were detected with horseradish peroxidase-conjugated species-specific secondary antiserum (Bio-Rad Laboratories), followed by enhanced chemiluminescence reaction (Pierce, Rockford, IL, USA).
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2

EZH2 and Snail Protein Interaction Protocol

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Cells were lysed in 50 mM Tris-HCl (pH 8.0), 150 mM NaCl, 5 mM EGTA (pH 8.0), 50 mM NaF (pH 8.0), 10% glycerol, 1.5 mM MgCl2, 1% Triton X-100 containing protease and phosphatase inhibitors (complete EDTA-free; Roche Applied Science, Mannheim Germany) and protein concentrations determined by Bradford method. One milligram of cell lysates, after preclearing with protein A-sepharose (GE Healthcare, Little Chalfont, Buckinghamshire, UK), was incubated with 5 μg of anti-EZH2 39901 (Active motif), anti-Snail AF3639 (R&D systems) and as negative control Normal Rabbit IgG 12370 (Millipore) or Normal Goat IgG AB-108-C (R&D systems). The complexes were incubated for 3 h with protein A-sepharose. Immune complexes were washed, eluted and denatured in Laemmli buffer. Proteins from either cell lysates or immunoprecipitation were resolved on sodium dodecyl sulphate-polyacrylamide gel electrophoresis and transferred to nitrocellulose membrane (162-0115; Bio-Rad Laboratories). Blots were probed with primary anti-EZH2 05-1319 (Millipore Corp.) or anti-Snail L70G2 (Cell Signaling Technology Inc., Danvers, MA, USA) and immune complexes were detected with horseradish peroxidase-conjugated species-specific secondary antiserum (Bio-Rad Laboratories), followed by enhanced chemiluminescence reaction (Bio-Rad Laboratories).
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3

Molecular Signaling Assays with Diverse Reagents

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LPS (L6529), puromycin (P8833), and PMA (P8139) were purchased from Sigma-Aldrich. TNF-α (300-01A) and IL-1β (200-01B) were from Peprotech. Cell lysis buffer (9803) was from Cell Signaling. Phosphatase Inhibitor Cocktail 3 (P0044) and Protease inhibitor cocktail (P8340) were from Sigma-Aldrich. Dynabeads Protein G (10004D), Dynabeads Protein A (10001D), SuperSignal West Femto Maximum Sensitivity Substrate (34096), and Pierce BCA Protein Assay (23225) were from Thermo Fisher Scientific. Dual-Luciferase Reporter Assay System (E1910) was from Promega. Nitrocellulose membrane (1620115) was from Bio-Rad. Polyethyleneimine (PEI) (24313-2) was purchased from Polysciences. Purified recombinant IKKα (TP761707) and IKKβ (TP750220) were purchased from Origene.
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