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5 protocols using z aad cmk

1

Cytotoxicity Assay with Inhibition

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The cytotoxicity assay procedure was prepared as mentioned previously. For GZMB inhibition, the effector cells were pre-incubated in IMDM + 10% FBS supplemented with 100 µM Z-AAD-CMK (Enzo Life Sciences; Farmingdale, NY) for 1 h. The effector cells were then added to the wells in a working solution of IMDM,10% FBS and 100 µM Z-AAD-CMK. For GZMA inhibition, the effector cells were pre-incubated in IMDM + 10% FBS supplemented with 5 µM nafamostat mesylate (Selleck Chem; Houston, TX) for 1 h. The effector cells were then added to the wells in a working solution of IMDM,10% FBS and 5 µM nafamostat mesylate.
For antibody blocking, the effector cells were incubated with 10 µg/mL anti-human FasL (CD178) monoclonal antibody (Clone NOK1, BioLegend) for 1.5 h with periodic agitation. The effector cells were then added to the wells in a working solution of IMDM,10% FBS and 10 µg/mL anti-FasL antibody. For IFN-γ and TNF-α blocking, the effector cells were incubated with 5 µg/mL anti-human IFN-γ monoclonal antibody (Clone 4 S.B3, BioLegend) and 5 µg/mL anti-human TNF-α monoclonal antibody (Cline MT25C5, Mabtech; Cincinnati, OH) for 1.5 h with periodic agitation. The effector cells were then added to the wells in a working solution of IMDM,10% FBS and 5 µg/mL anti-IFN-γ and anti-TNF-α antibodies.
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2

Neutrophil-mediated MRSA killing assay

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Whole blood from healthy donors was collected and neutrophils isolated by negative selection using a direct neutrophil isolation kit (Stem Cell Technologies), yielding purity of >99%. For MRSA killing assays, 4 × 105 neutrophils were incubated in RPMI medium with PBS or IL-21 (100 ng/ml), followed by the addition of 50 μl of MRSA (at a 1:1800 dilution of an optical density at 600 nm (OD600) = 0.25) pre-incubated in 10% autologous serum. For granzyme B inhibition, neutrophils were pre-incubated for 20 min with 100 μM Z-AAD-CMK (Enzo Life Sciences). Tubes were rotated at 37°C for 3 hr, and serial dilutions then spread on blood agar plates, incubated overnight, and CFU determined. De-identified whole blood from healthy volunteer donors from the NIH Department of Transfusion Medicine was obtained and met the Office of Human Subjects Research criteria for a waiver for the need for IRB approval.
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3

Interferon Alpha Signaling Modulation

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Universal Type I IFN Alpha (PBL) was used at 5–500 U/mL. Lipofectamine 3000 (Thermo Fisher Scientific) was used to deliver cGAMP (InvivoGen). Z-AAD-CMK (Enzo Life Sciences) was dissolved in water at 10 mM and diluted in medium at a final concentration of 100 μM. Ruxolitinib (LC Laboratories) was dissolved in DMSO at 5 mM and then diluted in medium at a final concentration of 2.5 μM.
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4

CFSE-based Cytotoxicity Assay

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In vitro cytotoxiocity assay was performed using CFSE-based labeling6 (link). SK37 or peptide-pulsed SK29 were labeled with 0.5 μM CFSE, whereas peptide-unpulsed SK29 was labeled with 5 μM CFSE. In some experiments, cancer cells were treated with 20 μg/ml Fas-ligand antibodies (eBiosciences) for 1 hour before addition to T cells. Fas-ligand antibody was also present during co-culture. 2 U/ml of recombinant IL-2, combination of 10 μg/ml anti-CD25 (IL-2Rα) antibody (BD Bioscience) and anti-IL-2 antibody (eBioscience), 0.1 nM concanamycin A (Sigma-Aldrich) or 100 μM Z-AAD-CMK (Enzo Biochem, Inc.) were added at the initiation of T cell culture. Cells were incubated in 5 mL round-bottom tubes for 14–16 hours. Cancer cells were harvested by treatment with trypsin/EDTA and analyzed for CFSE staining levels by FACSCalibur flow cytometer (BD Biosciences) to enumerate the percentages of SK37 and SK29. Acquisition data were analyzed by FCS Express Version 3 software (De Novo Software) or FlowJo software. Cytotoxicity was calculated using the following formula: % cytotoxicity = 100 × {1−(%SK29/%SK37)without T cells/(%SK29/%SK37)with T cells}.
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5

Evaluating MDSC's Immunosuppressive Activity

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An in vitro T-cell assay was performed as described to evaluate the MDSC’s activity [22 (link)]. Briefly, 1 × 105 carboxy fluorescein diacetate succinimidyl ester (Invitrogen, California, USA) labeled T-cells were activated with a 1/800 dilution of anti-CD3/CD28 antibody coated beads (Invitrogen, California, USA) and cultured with or without 5 × 104 WT or KO MDSCs. When indicated, the GzmB inhibitor, Z-AAD-CMK (Enzo Life Sciences, Antwerpen, Belgium), was added (10 μM). T-cell proliferation and viability were determined in flow cytometry.
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