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7 protocols using anti p p65 3033

1

Immunoblotting Analysis of Aorta and Macrophages

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Fresh aorta issues or in vitro cultured macrophages were lysed and homogenized in precooled RIPA lysis buffer. The isolated extracts were used for protein quantification, and immunoblotting analysis was conducted as reported [21 (link),23 (link)]. All the primary antibodies used, including anti-ACE antibody (ARG41098, 1:1000, Arigo Biolaboratories Corp), anti-MasR (20080-1-AP, Proteintech Group), and anti-AT1R1 (25343-1-AP, Proteintech Group); anti-ACE2 (38241S, 1:1000), anti-P-p65 (3033, 1:1000), anti-p65 (8242, 1:1000), anti-P-Stat1 (9167S, 1:1000), anti-Stat1 (14995S, 1:1000), anti-β-actin (4970, 1:1000) or anti-GAPDH (5174S), were purchased from Cell Signaling Technology; and anti-3-nitrotyrosine (3-NT, sc-32757, 1:1000) was obtained from Santa Cruz Biotechnology.
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2

Immunohistochemical Protocol for p-p65

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After the brain sections were incubated with EDTA (pH 9.0) and heated in a water bath, they were treated with H2O2 and blocked with 10% bovine serum albumin (NA8692; Bomei Biotechnology, Hefei, China). Subsequently, the sections were incubated at 4°C overnight with a primary antibody (anti-p-p65, 3033; Cell Signaling Technology). Next, the sections were incubated using a Rabbit Two-step Detection Kit (PV-9001; ZSGB-BIO, Beijing, China). Finally, the sections were visualized using diaminobenzidine (ZLI-9018; ZSGB-BIO) and hematoxylin was used to label the nuclei.
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3

Investigating NF-κB Signaling Pathway

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LPS (L4391-1 MG), IL-1β (SRP3083), and TNFα (SRP2102) were purchased from Sigma‒Aldrich (St. Louis, MO). Anti-IKKα/b (2682), anti-p-IKKα (2078), anti-IκBα (9242), anti-p-IκBα (9246), anti-p65 (8242), anti-A20 (5630), and anti-p-p65 (3033) antibodies were purchased from Cell Signaling Technology (Danvers, MA, USA). Anti-Tubulin (T5168) and anti-OTUD4 (HAP036623) were purchased from Sigma‒Aldrich. Anti-MyD88 (sc-74532), anti-TLR4 (sc-293072), and anti-IRAK-1 (sc-5288) antibodies were purchased from Santa Cruz Biotechnology (Santa Cruz, CA, USA). The anti-RNF115/BCA2 antibody (ab187642) was purchased from Abcam (Cambridge, MA). Cells were harvested, lysed in RIPA lysis buffer supplemented with 1×Proteinase Inhibitor Cocktail (MedChemExpress, Monmouth Junction, NJ, USA, HY-K0010) and quantified using a BCA kit (Thermo Fisher). Briefly, ~40 µg of each protein sample was subjected to SDS‒PAGE and transferred to polyvinylidene fluoride (PVDF) membranes (Merck Millipore, Germany, #IPFL00010). The membrane was blocked with 5% milk for one hour and then incubated with primary antibody overnight at 4 °C. The membrane was incubated with horseradish peroxidase (HRP)-conjugated secondary antibodies (Invitrogen, #31460 & #31430) for 1 hour at RT. Chemiluminescence was detected using an ImageQuant LAS4000 biomolecular imager (GE, USA) with Western HRP substrate (US Everbright, S6009 L).
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4

Comprehensive Colorectal Cancer Protocol

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Azoxymethane (AOM, A2853) and 4′, 6-diamidino-2-phenylindole (DAPI, D8417) were purchased from Sigma-Aldrich. Dextran sulfate sodium (DSS, 36–50 KD, 0216011080) was purchased from MP Biomedicals. Myeloperoxidase (MPO, A044) activity assay kit was purchased from Nanjing Jiancheng Bioengineering Institute. ELISA kits for murine TNF-α (12-2720), murine IL-17A (12-2170), murine IFN-γ (12-2000), murine IL-1β (12-2012) and human IL-1β (12-1012) were purchased from Beijing Dakewe Biotech. Cytokines including IL-12, IFN-γ, IL-6, IL-2 were purchased from R&D. Anti-IFN-γ and anti-IL-4 were from Peprotech. Anti-p-p65 (3033) was purchased from Cell Signaling Technology. Anti-actin (sc-1616), anti-COX2 (sc-19999) and anti-PCNA (sc-56) were purchased from Santa Cruz Biotechnology. GTVisinTM anti-mouse/anti-rabbit immunohistochemistry analysis kit was purchased from Shanghai Gene Company.
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5

Comprehensive Immune Response Analysis in Murine Model

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Poly I:C-HMW (tlrl-pic) was bought from Invivogen (San Diego, California). ELISA kits for TNF-α, IL-6 and IL-1β were purchased from Dakewei (Beijing, China). Anti-p-p65 (3033) was purchased from Cell Signaling Technology (Beverly, MA) were purchased from Cell Signaling Technology (Beverly, MA, USA). β-Actin (M20011) was purchased from Abmart (Shanghai, China). Anti-MUC5AC (RLN0880), anti-MUC5B (RLN0881) were purchased from Ruiying Biological company (Suzhou, China). Anti-CD3-APC, anti-CD11b-PE, anti-Gr1+-FITC antibodies were bought for eBioscience. GTVisin™ anti-mouse/anti-rabbit immunohistochemical analysis KIT was purchased from Gene Company (Shanghai, China). Andrographolide sulfonate (Andro-S, trade name: Xi-Yan-Ping Injection) was provided by Jiangxi Qingfeng Pharmaceutical Co., Ltd (Ganzhou, China). All other chemicals were obtained from Sigma–Aldrich (St. Louis, MO).
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6

NF-κB Activation Pathway Evaluation

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Antibodies against Iκκβ (ab32135) and p65 (ab7970) and Alexa Fluor 555 Donkey anti-Rb IgG (H + L) antibody (ab150074) were obtained from Abcam (Cambridge, MA, USA). The other antibodies used were as follows: anti-IKB-α (sc-1643) and anti-p-IKB-α (sc-8404) (Santa Cruz Biotechnology, CA, USA), anti-p-p65 (3033S; Cell Signaling Technology, Danvers, MA, USA), and anti-NFKB1 (NF-κB p50) (14220-1-AP; ProteinTech, Rosemont, IL, USA). Anti-GAPDH (H301; TransGen Biotech, Beijing, China) was used as normalized control. Enzyme-linked immunosorbent assay (ELISA) kits for IL-6 (CSB-E04638h), IL-8 (CSB-e04641h), and TNF-α (CSB-EQ023955HU) were obtained from Cusabio Biotech (Wuhan, China). M-MLV Reverse Transcriptase (M1701) and GoTaq qPCR Master Mix (A6001) were obtained from Promega (Madison, WI, USA).
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7

Antibody Characterization for Cell Signaling

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Anti-mRip3, p-Rip3, Fadd and Mlkl antibodies were described previously19 (link). Anti-Ppm1b antibody was raised in rabbit using GST-tagged full-length human Ppm1b-L as the antigen. Anti-human Rip3 (ab72106, dilution 1:1,000) and anti-Ppm1a (ab14824, dilution 1:1,000) antibodies were from Abcam. Anti-Flag (F7425, dilution 1:500), Myc (A7470, agarose affinity gel) and HA (A2095, agarose affinity gel) antibodies were obtained from Sigma. Anti-Myc (sc-40, dilution 1:500), HA (sc-805, dilution 1:500) and anti-β-actin (sc-47778, dilution 1:10,000) antibodies were obtained from Santa Cruz Biotechnology. Anti-Rip1 (610459, dilution 1:1,000) antibody was obtained from BD Biosciences. Anti-Gapdh (60004-1-Ig, dilution 1:2,000) and anti-Canx (10427-2-AP, dilution 1:500) antibodies were from Proteintech. Anti-p-p65 (3033s, dilution 1:1,000), p65 (8242s, dilution 1:200), p-p38 (9216S, dilution 1:1,000), p38 (9212s, dilution 1:200) and H3 (9715, 1:5,000) antibodies were obtained from Cell Signaling Technology. Mouse TNFoc was purchased from eBioscience. zVAD was obtained from Calbiochem. Propidium iodide (PI), 4-hydroxytamoxifen (4-OHT) and Protease Inhibitor Mix were from Sigma. λ-phosphatase (λ-Ppase) was from NEB. AP21967 (A/C Heterodimerizer) was obtained from ARIAD Pharmaceuticals.
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