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15 protocols using ecl detection reagent

1

Protein Expression Analysis of Rat Striatal Region

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Under deep anesthesia (sodium pentobarbital i.p.; 50 mg/kg), rats were euthanized at 24 h. The striatal region of the brain was rapidly isolated and homogenized, and total proteins were extracted using protein extraction buffer (Mammalian Cell-PE LBTM, Geno Technology, USA) containing protease and phosphatase inhibitors (Complete Mini, Roche Diagnostics, Indianapolis, IN, USA). Lysed tissues were centrifuged at 12,500 rpm for 15 min (at 4 °C), and the supernatant was collected for storage at −80 °C or to perform a Western blot analysis. Proteins were separated by gel electrophoresis, and then electroblotted onto polyvinylidene difluoride (PVDF) membranes (PerkinElmer Life Sciences, USA). Membranes were blocked with 5% non-fat milk, and then incubated overnight at 4 °C with the indicated antibodies, including heme oxygenase (HO)-1, Bax, cleaved caspase-3, Beclin-1, LC3-I/II, and p62 (1:103 dilution) followed by an appropriate secondary antibody (1:2 × 104 dilution) for 1 h at room temperature. Signals were visualized using enhanced chemiluminescent (ECL) detection reagents (PerkinElmer Life Sciences). The membrane was then stripped and reprobed with an antibody specific for β-actin (1:104 dilution) to ensure the accuracy of each loading. Protein expression was quantified by a BioImaging System (Level Biotechnology).
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2

HBP1 Regulation via PI3K Inhibition

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All chemicals were purchased from Sigma (St. Louis, MO) and antibodies were from Santa Cruz Biotechnology (Santa Cruz, CA), respectively, unless specified otherwise. Antibody for HBP1 was from Novus Biologicals (Littleton, CO), and α-tubulin was from Abcam (Cambridge, MA). PVDF membranes and ECL detection reagents for Western blotting analysis were purchased from Perkin Elmer Life Sciences, Inc. (Waltham, MA). Dual-light® system was from Applied Biosystems (Foster City, CA). PI3K inhibitor LY 294002 was purchased from Sigma (St. Louis, MO). Small interfering RNA (siRNA) molecules specific for HBP1 was purchased from Invitrogen (Carlsbad, CA).
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3

Protein Expression Analysis by Western Blotting

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For Western blotting analysis, the cells were lysed on ice for 30 min in a lysis buffer containing fresh protease and phosphotase inhibitor cocktails (Sigma). The lysates were then centrifuged (12000 g at 4 °C for 15 min). Protein concentrations were determined by protein assay (Bio-Rad, Hercules, CA). Equivalent proteins were denatured in protein loading buffer, loaded onto 10% SDS-PAGE gels, and subsequently transferred to polyvinylidene difluoride (PVDF) membranes (Millipore, Billerica, MA) by electroblotting. The PVDF membranes were blotted with 5% nonfat milk in TBST buffer (Bio-Rad) for 1 h and incubated overnight at 4°C with antibodies against galectin-1, COX2, β-actin (Abcam) and AKT, p-AKT, mTOR, p-mTOR (CST). Signals were detected using ECL detection reagents (Perkin-Elmer Life Sciences, Boston, USA) following the manufacturer's instructions.
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4

Protein Isolation and Western Blot Analysis

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After treatment the cells were lysed in RIPA buffer supplemented with protease and phosphatase inhibitors. Lysates were then centrifuged for 15 min at 13,000 rpm at 4°C. Supernatants were collected and the protein concentrations were determined using a BCA assay kit (Thermo Scientific, Rockford, IL). An aliquot of 20 µg protein from each sample (cell or liver lysates) was prepared in SDS buffer and run on 10% Tris-SDS acrylamide gels. Nitrocellulose membranes were used for transfer. The blots were then blocked in 1% BSA and incubated in a primary antibody solution overnight followed by 1 h incubation in HRP-conjugated secondary antibody. ECL detection reagents (PerkinElmer, Boston, MA) were used to detect protein bands that were exposed on blue X-ray film (Phenix Research Products, Candler, NC).
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5

Brain Tissue Lysis and Protein Detection

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Brain tissue samples were lysed in sucrose buffer (18% sucrose, 10 mM Tris/HCl pH 7.4, 1 mM sodium hydrogen carbonate, 1 mM magnesium chloride, 0.1% Triton, 0.2% lithiumdodecyl sulphate, 0.025% sodium deoxycholate) with protease inhibition (Roche) using a Precellys 24 homogenizer (Bertin technologies). Detection of immunolabeled proteins was performed with ECL detection reagent (Perkin Elmer) using ChemoCam Imager (Intas).
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6

Whole-Cell Protein Extraction and Western Blot

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After the treatment, the medium was aspirated. Cells were rinsed once with ice-cold PBS, harvested, and lysed directly with 1X sodium dodecyl sulfate (SDS) gel-loading buffer (50 mM Tris-HCl, pH 6.8, 2% 2-mercaptoethanol, 0.1% bromophenol blue, and 10% glycerol). Samples were heated at 95°C for 5 min and equal amounts of the whole cell extracts were electrophoresed on 8%-15% SDS-polyacrylamide gel electrophoresis (PAGE), and transferred to Immunobilon-P (Millipore, USA). Membranes were blocked with Tris-buffered saline with Tween 20 (TBST) (50 mM Tris-HCl, pH 7.5, 150 mM NaCl, and 0.1% Tween 20) containing 5% non-fat milk for 1 h at room temperature to minimize nonspecific binding. After hybridization with the primary antibodies, membranes were washed three times with TBST and incubated with a horseradish peroxidase-conjugated secondary antibody for 1 h. After washing three times with TBST, the protein bands were detected using an ECL detection reagent (PerkinElmer [USA] or Millipore). β-Actin was used as the internal control.
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7

Western Blot Analysis of Protein Expression

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Cells were lysed using standard western blot lysis buffer (Life Technologies) and the prepared cell lysates were stored at −80°C until use. The samples were boiled and subjected to SDS‐PAGE with 10% Tris‐glycine gels (Life Technologies) followed by protein transfer onto polyvinylidene difluoride (PVDF) membrane. The membranes were developed according to the standard protocols using primary and secondary antibodies as mentioned in Table S2. The bands were visualized using enhanced chemiluminescence (ECL) detection reagent (Perkin Elmer Inc) and photographed using FluorChem M Imaging System (ProteinSimple, Alpha Innotech). Intensity of individual bands was quantified using ImageJ densitometry software and expressed in %.
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8

Immunoblotting Detection of Amylase, BIRC2, and CA6

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Immunoblotting analysis were performed using 10 μg protein from each group. Samples were separated by 7.5% or 10% SDS-PAGE and transferred to nitrocellulose membranes and subsequently probed with antibodies. Antibodies to Amylase, Baculoviral IAP repeat-containing protein 2 (BIRC2) and Carbonic anhydrase 6 were from Abcam, Cambridge, MA, USA., MyBioSource, Inc., San Diego, CA, USA. and Santa Cruz Biotechnology, Inc., USA. Immunoreactive protein bands were visualized using an ECL detection reagent (PerkinElmer, Inc., Waltham, MA, USA).
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9

Protein Extraction and Western Blotting Protocol

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Cells were lysed in buffer containing RIPA lysis buffer, 10% SDS buffer, protease inhibitor (Roche) and phosphatase inhibitor I&II (Calbiochem). After sonication for 5 sec and centrifugation at 13500 rpm for 15 min, equal amounts of protein from each group were loaded into a 10% SDS-polyacrylamide gel and then transferred to a polyvinylidene difluoride membrane (Millipore). The membrane was incubated with appropriate primary and secondary antibodies as described above. Membrane signals were detected using the ECL detection reagent (Perkin Elmer) and film processor SRX - 101A (Konica Minolta).
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10

Protein Analysis by Western Blotting

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Cells were lysed in RIPA buffer (Pierce Thermoscientific, Rockford, IL, USA) containing protease inhibitor cocktail and phosphatase inhibitors (Roche Diagnostics, Mannheim, Germany). The samples were boiled in standard protein sample buffer and were subjected to sodium dodecyl sulfate-polyacrylamide gel electrophoresis with 4–20% Tris-glycine gels (Life Technologies) followed by protein transfer onto a polyvinylidene difluoride membrane. The membranes were developed according to the standard protocols using primary and secondary antibodies (refer to Supplementary Table 1). The bands were visualized using ECL detection reagent (Perkin Elmer Inc., Waltham, MA, USA) and were photographed using the FluorChem M Imaging System (ProteinSimple, Alpha Innotech, San Leandro, CA, USA).
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